Search results for " information"

showing 10 items of 10075 documents

Whole genome sequencing data and de novo draft assemblies for 66 teleost species

2017

Teleost fishes comprise more than half of all vertebrate species, yet genomic data are only available for 0.2% of their diversity. Here, we present whole genome sequencing data for 66 new species of teleosts, vastly expanding the availability of genomic data for this important vertebrate group. We report on de novo assemblies based on low-coverage (9–39×) sequencing and present detailed methodology for all analyses. To facilitate further utilization of this data set, we present statistical analyses of the gene space completeness and verify the expected phylogenetic position of the sequenced genomes in a large mitogenomic context. We further present a nuclear marker set used for phylogenetic…

0106 biological sciences0301 basic medicineStatistics and ProbabilityData DescriptorComputational biologyLibrary and Information Sciences010603 evolutionary biology01 natural sciencesGenomeEducation03 medical and health sciencesbiology.animalGenome assembly algorithmsAnimalsDNA sequencingGenePhylogenyGeneticsWhole genome sequencingGenomeWhole Genome SequencingbiologyPhylogenetic treeComparative genomicsGene treeFishesRobustness (evolution)VertebrateGenomicsComputer Science ApplicationsMetadata030104 developmental biologyStatistics Probability and UncertaintyInformation SystemsScientific Data
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Survey of five major grapevine viruses infecting Blatina and Žilavka cultivars in Bosnia and Herzegovina

2021

The sanitary status of grapevines has not yet been considered sufficiently in vineyards throughout Bosnia and Herzegovina (BiH). An extensive survey of five major grapevine viruses in the country was carried out in 2019. A total of 630 samples from the two dominant autochthonous cultivars, named Žilavka and Blatina, were tested by DAS-ELISA for the presence of grapevine leafroll-associated viruses (GLRaV-1 and 3), grapevine fleck virus (GFkV), grapevine fanleaf virus (GFLV) and Arabis mosaic virus (ArMV). Eighty-eight % of the samples were positive for at least one virus, and all five viruses were detected, thought with different incidence, i.e. GLRaV-3 (84%), GFLV (43%), GLRaV-1 (14%), GFk…

0106 biological sciences0301 basic medicineVeterinary medicineArtificial Gene Amplification and ExtensionDisease VectorsPathology and Laboratory MedicinePolymerase Chain Reaction01 natural sciencesPlant VirusesMedical ConditionsXiphinemaMedicine and Health SciencesVitisCultivarNematode InfectionsFlowering PlantsPhylogenyData Managementeducation.field_of_studyMultidisciplinarybiologyPhylogenetic treeQREukaryotaPhylogenetic AnalysisGrapevine fanleaf virusPlantsPhylogeneticsInfectious DiseasesMedical MicrobiologyViral PathogensVirusesMedicineRNA ViralGrapevineViral VectorsPathogensPlant ViruseResearch ArticleComputer and Information SciencesSciencePopulationPlant DiseaseResearch and Analysis Methodsno key wordsMicrobiologyVirusArabis mosaic virus03 medical and health sciencesVirologyParasitic DiseasesEvolutionary SystematicsMolecular Biology TechniqueseducationMolecular BiologyMicrobial PathogensTaxonomyPlant DiseasesBosnia and HerzegovinaEvolutionary BiologyGenetic diversityOrganismsBiology and Life SciencesSettore AGR/12 - Patologia VegetaleReverse Transcriptase-Polymerase Chain Reactionbiology.organism_classificationVector-Borne DiseasesSpecies Interactions030104 developmental biologyViral Transmission and Infection010606 plant biology & botany
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Use of waggle dance information in honey bees is linked to gene expression in the antennae, but not in the brain.

2021

AbstractCommunication is essential for social animals, but deciding how to utilize information provided by conspecifics is a complex process that depends on environmental and intrinsic factors. Honey bees use a unique form of communication, the waggle dance, to inform nestmates about the location of food sources. However, as in many other animals, experienced individuals often ignore this social information and prefer to rely on prior experiences, i.e. private information. The neurosensory factors that drive the decision to use social information are not yet understood. Here we test whether the decision to use social dance information or private information is linked to gene expression diff…

0106 biological sciences0301 basic medicinemedia_common.quotation_subjectGene ExpressionBiology010603 evolutionary biology01 natural sciencesSocial dance570 Life sciences03 medical and health sciencesPerceptionGeneticsAnimalsAnimal communicationPrivate information retrievalEcology Evolution Behavior and Systematicsmedia_commonCommunicationbusiness.industryBrainWaggle danceCognitionBeesAnimal Communication030104 developmental biologyFoodMushroom bodiesOdorantsSocial animalbusiness570 BiowissenschaftenInformation integrationMolecular ecologyREFERENCES
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Next-generation cophylogeny: unravelling eco-evolutionary processes

2021

A fundamental question in evolutionary biology is how microevolutionary processes translate into species diversification. Cophylogeny provides an appropriate framework to address this for symbiotic associations, but historically has been primarily limited to unveiling patterns. We argue that it is essential to integrate advances from ecology and evolutionary biology into cophylogeny, to gain greater mechanistic insights and transform cophylogeny into a platform to advance understanding of interspecific interactions and diversification more widely. We discuss key directions, such as incorporating trait reconstruction and considering multiple scales of network organization, and highlight rece…

0106 biological sciences0303 health sciencesEcologyEco evolutionaryComputer scienceDiversification (marketing strategy)Biological Evolution010603 evolutionary biology01 natural sciencesData science03 medical and health sciencesCospeciationTraitSymbiosisRelevant informationPhylogenyEcology Evolution Behavior and Systematics030304 developmental biology
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2019

Honeybees use the waggle dance to share information about food-site locations with nestmates. However, the importance of this behavior in colony foraging success remains unclear. We tested whether spatial dance information affects colony foraging success in a human-modified temperate environment by comparing colonies with oriented and disoriented dances. Notably, colonies with disoriented dances had greater foraging success. Over time, bees exposed to disoriented dances showed reduced interest in dancing nestmates. This may explain why disoriented colonies had a higher foraging rate than oriented colonies, as bees did not waste time waiting for information. This change in information-use st…

0106 biological sciences0303 health sciencesMultidisciplinaryForage (honey bee)DanceTemperate environmentEcologyForagingWaggle dance010603 evolutionary biology01 natural sciences03 medical and health sciencesGeographySocial information030304 developmental biologyScience Advances
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Phenological sensitivity to climate change is higher in resident than in migrant bird populations among European cavity breeders

2018

Many organisms adjust their reproductive phenology in response to climate change, but phenological sensitivity to temperature may vary between species. For example, resident and migratory birds have vastly different annual cycles, which can cause differential temperature sensitivity at the breeding grounds, and may affect competitive dynamics. Currently, however, adjustment to climate change in resident and migratory birds have been studied separately or at relatively small geographical scales with varying time series durations and methodologies. Here, we studied differential effects of temperature on resident and migratory birds using the mean egg laying initiation dates from 10 European n…

0106 biological sciencesBLUE TITadaptation01 natural sciencesNesting Behavior010605 ornithologyGEOGRAPHICAL VARIATIONadaptation birds climate change competition information use laying date nest boxes timingtimingClimate changePasseriformesGeneral Environmental ScienceTrophic levelmedia_commonGlobal and Planetary ChangeEcologyEcologyPhenologyReproductionTemperatureEuropeNEST-SITE SELECTIONclimate changeMIGRATORY BIRDSinternationalTROPHIC LEVELSSeasonslaying datecompetitionnest boxesmedia_common.quotation_subjectta1172Climate changeBiologySPRING TEMPERATURE010603 evolutionary biologyCompetition (biology)BirdsLONG-DISTANCE MIGRANTmedicineAnimalsEnvironmental ChemistryTIT PARUS-MAJORAdaptationNest boxCompetitionSHIFTSInterspecific competitioninformation use15. Life on landSeasonalitymedicine.disease13. Climate actionbirdsFLYCATCHERS FICEDULA-HYPOLEUCAta1181Animal MigrationAdaptationGlobal Change Biology
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Octopamine and dopamine mediate waggle dance following and information use in honeybees.

2020

Honeybees can be directed to profitable food sources by following waggle dances performed by other bees. Followers can often choose between using this social information or relying on memories about food sources they have visited in the past, so-called private information. While the circumstances that favour the use of either social or private information have received considerable attention, still little is known about the neurophysiological basis of information use. We hypothesized that octopamine and dopamine, two biogenic amines with important functions in reward signalling and learning, affect dance use in honeybees. We orally administered octopamine and dopamine when bees collected fo…

0106 biological sciencesBees/physiologyDancemedia_common.quotation_subjectDopamine010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyOctopamine/metabolism03 medical and health scienceschemistry.chemical_compoundReward systemPerceptionAnimalsBehaviourSocial BehaviorPrivate information retrievalOctopamine030304 developmental biologyGeneral Environmental Sciencemedia_common0303 health sciencesGeneral Immunology and MicrobiologyInformation flowWaggle danceGeneral MedicineOctopamine (drug)BeesSocial learningDopamine/metabolismAnimal CommunicationchemistryGeneral Agricultural and Biological SciencesPsychologyCognitive psychologyProceedings. Biological sciences
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Activated Carbon from Renewable Sources: Thermochemical Conversion and Activation of Biomass and Carbon Residues from Biomass Gasification

2017

Activated carbon is one of the most widely applied adsorbent. As a porous carbon, it is used for the purification of both gaseous and liquid emissions. Activated carbon is prepared from fossil resources, such as coal, or from biomass through (hydro)thermal processing followed by chemical and/or physical activation. Further, some biomass thermal treatment processes, such as biomass gasification, produce carbon residues that can be modified to activated carbon with physical or chemical activation methods. The desired properties of activated carbon, i.e. high specific surface area and porosity, high carbon content and excellent sorption capacity, can be modified and optimized during thermochem…

0106 biological sciencesBiomass to liquidWaste managementCarbonizationChemistrybusiness.industry020209 energyfood and beveragesBiomasschemistry.chemical_elementSorption02 engineering and technologycomplex mixtures01 natural sciencesAdsorptionChemical engineering010608 biotechnology0202 electrical engineering electronic engineering information engineeringmedicineCoalbusinessCarbonActivated carbonmedicine.drug
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EUNIS Habitat Classification: Expert system, characteristic species combinations and distribution maps of European habitats

2020

Aim The EUNIS Habitat Classification is a widely used reference framework for European habitat types (habitats), but it lacks formal definitions of individual habitats that would enable their unequivocal identification. Our goal was to develop a tool for assigning vegetation-plot records to the habitats of the EUNIS system, use it to classify a European vegetation-plot database, and compile statistically-derived characteristic species combinations and distribution maps for these habitats. Location Europe. Methods We developed the classification expert system EUNIS-ESy, which contains definitions of individual EUNIS habitats based on their species composition and geographic location. Each ha…

0106 biological sciencesBos- en Landschapsecologiecoastal habitat ; diagnostic species ; distribution map ; dune vegetation European Nature Information System (EUNIS) ; European Vegetation Archive (EVA) ; expert system ; forest ; grassland ; habitat classification ; man-made habitat ; shrubland ; vegetation database ; vegetation plot ; wetlandBiodiversityDistribution (economics)Wetlandcomputer.software_genre01 natural sciencesGrasslandforestman-made habitatForest and Landscape EcologyPlant ecologybiodiversitygeography.geographical_feature_categoryEcologyVegetationPE&RCwetlandEuropeGeographyHabitathabitat classificationVegetatie Bos- en LandschapsecologieEuropaEuropean Nature Information System (EUNIS)Cartographydune vegetationvegetation plotHabitat (Ecology)databasescoastal habitat; diagnostic species; distribution map; dune vegetation; European Nature Information System (EUNIS); European Vegetation Archive (EVA); expert system; forest; grassland; habitat classification; man-made habitat; shrubland; vegetation database; vegetation plot; wetlandHàbitat (Ecologia)Management Monitoring Policy and Law010603 evolutionary biologyShrublanddistribution mapvegetationinvasionsvegetation database14. Life underwatercoastal habitat577: ÖkologieVegetatieNature and Landscape Conservationexpert systemforestsVegetationbusiness.industryEcologia vegetalwetland formalized classificationalien plants15. Life on landExpert systemfidelitydiagnostic speciesexampleVegetation Forest and Landscape Ecologygrassland[SDE.BE]Environmental Sciences/Biodiversity and Ecologybusinessman‐made habitatshrublandcomputer010606 plant biology & botanyEuropean Vegetation Archive (EVA)
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Influence of the Storage of Cistus ladanifer L. Bales from Mechanised Harvesting on the Essential Oil Yield and Qualitative Composition

2021

Cistus ladanifer is a Mediterranean native plant from which valuable products, such as essential oil, are obtained. Manual harvesting of the plants in wild shrublands is usual during short periods of time. Their mechanised harvesting could increase the volume of harvested plants and prevent fires, further storage of the plants collected being necessary. The objective of this work is to study the influence of the storage period of mechanically harvested bales on the essential oil yield and qualitative composition. The harvesting trials were carried out with an adapted commercial harvester baler and the storage of the bales was performed indoors during 1–7 days, 15–30 days and 100–120 days. A…

0106 biological sciencesChromatography Gasdistillation020209 energyPharmaceutical ScienceBiomassOrganic chemistry02 engineering and technology01 natural sciencesCistus ladaniferGas Chromatography-Mass SpectrometryArticleessential oilAnalytical Chemistrylaw.inventionSteam distillationmechanised harvestingQD241-441<i>Cistus ladanifer</i> L.lawDrug Discovery0202 electrical engineering electronic engineering information engineeringOils VolatilePhysical and Theoretical ChemistryDistillationEssential oilbiologySuperheated steamCistusbiology.organism_classificationrockroseHorticulturePilot plantChemistry (miscellaneous)pilot plantMonoterpenesMolecular MedicineEnvironmental scienceComposition (visual arts)Cistus ladanifer L.010606 plant biology & botanyMolecules
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