Search results for " insertion"

showing 10 items of 89 documents

Near-infrared imaging and structured light ranging for automatic catheter insertion

2006

Vein localization and catheter insertion constitute the first and perhaps most important phase of many medical procedures. Currently, catheterization is performed manually by trained personnel. This process can prove problematic, however, depending upon various physiological factors of the patient. We present in this paper initial work for localizing surface veins via near-infrared (NIR) imaging and structured light ranging. The eventual goal of the system is to serve as the guidance for a fully automatic (i.e., robotic) catheterization device. Our proposed system is based upon near-infrared (NIR) imaging, which has previously been shown effective in enhancing the visibility of surface vein…

Catheter insertionbusiness.industryComputer scienceNear-infrared spectroscopyProcess (computing)Image processingRangingmedicine.anatomical_structuremedicineComputer visionArtificial intelligenceVeinbusinessVisibilityStructured lightSPIE Proceedings
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Mechanistic Study of Stepwise Methylisocyanide Coupling and C-H Activation Mediated by a Low-Valent Main Group Molecule

2013

An experimental and DFT investigation of the mechanism of the coupling of methylisocyanide and C-H activation mediated by the germylene (germanediyl) Ge(Ar(Me6))2 (Ar(Me6) = C6H3-2,6(C6H2-2,4,6-Me3)2) showed that it proceeded by initial MeNC adduct formation followed by an isomerization involving the migratory insertion of the MeNC carbon into the Ge-C ligand bond. Addition of excess MeNC led to sequential insertions of two further MeNC molecules into the Ge-C bond. The insertion of the third MeNC leads to methylisocyanide methyl group C-H activation to afford an azagermacyclopentadienyl species. The X-ray crystal structures of the 1:1 (Ar(Me6))2GeCNMe adduct, the first and final insertion …

ChemistryLigandStereochemistryIsocyanideMigratory insertionGeneral ChemistryCrystal structureBiochemistryCatalysisAdductchemistry.chemical_compoundColloid and Surface ChemistryMoleculeIsomerizationta116Methyl groupJournal of American Chemical Society
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Roles of a conserved proline in the internal fusion peptide of Ebola glycoprotein

2004

AbstractThe structural determinants underlying the functionality of viral internal fusion peptides (IFPs) are not well understood. We have compared EBOwt (GAAIGLAWIPYFGPAAE), representing the IFP of the Ebola fusion protein GP, and EBOmut (GAAIGLAWIPYFGRAAE) derived from a non-functional mutant with conserved Pro537 substituted by Arg. P537R substitution did not abrogate peptide-membrane association, but interfered with the ability to induce bilayer destabilization. Structural determinations suggest that Pro537 is required to preserve a membrane-perturbing local conformation in apolar environments.

Circular dichroismEbola glycoproteinProtein insertion into membranesProlinePeptide conformationMutantMolecular Sequence DataBiophysicsBiochemistrySendai viruschemistry.chemical_compoundStructural BiologyGeneticsProlineAmino Acid SequenceMolecular BiologyPeptide sequencePOPCchemistry.chemical_classificationChemistryProteïnes de membranaCell BiologyEbolavirusFusion proteinPeptide FragmentsPeptide ConformationViral fusion peptideBiochemistryAvian Sarcoma VirusesLiposomesHIV-1PèptidsGlycoproteinPeptide–lipid interactionViral Fusion ProteinsFEBS Letters
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Factors Behind Junk DNA in Bacteria

2012

Although bacterial genomes have been traditionally viewed as being very compact, with relatively low amounts of repetitive and non-coding DNA, this view has dramatically changed in recent years. The increase of available complete bacterial genomes has revealed that many species present abundant repetitive DNA (i.e., insertion sequences, prophages or paralogous genes) and that many of these sequences are not functional but can have evolutionary consequences as concerns the adaptation to specialized host-related ecological niches. Comparative genomics analyses with close relatives that live in non-specialized environments reveal the nature and fate of this bacterial junk DNA. In addition, the…

Comparative genomicsGeneticslcsh:QH426-470Pseudogenegenome degradationjunk DNApseudogenesBacterial genome sizeReviewBiologyintergenic regions (IGR)GenomeNoncoding DNAlcsh:GeneticsIntergenic regionjunk DNA; pseudogenes; intergenic regions (IGR); insertion sequences (IS); genome degradationGeneticsInsertion sequenceGeneinsertion sequences (IS)Genetics (clinical)Genes
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Integración: una cuestión de derechos

2010

This article achieves a comparative analysis between the Citizenship and Integration Programme (2007-2010) and the spanish Migration Bill Project. Firstly, it aims to analyze whether the concept of integration, as it was introduced as a general principle within the Migration Bill, is consistent with the concept of the Programme. Secondly, it is about to examine how the notion of integration affects some of the provisions, which are introduced by the law reform, especially on fundamental rights. Finally, this leads to assess the implications and strains between migration control policies and integration policies about migrants’.

Cultural StudiesSociology and Political Sciencemedia_common.quotation_subjectEspañaFundamental rightslcsh:Ainserción socialGeneral Worksfundamental rightspolíticas de integraciónMigrationssocial insertionPolitical scienceACitizenshipLaw and economicsmedia_commonLaw reformassimilationGeneral Arts and Humanitiesigualdad en derechosasimilaciónMigracionesSpainLawlcsh:General Worksintegration policiesequality rightsArbor: Ciencia, Pensamiento y Cultura
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Putrescine as a signal to modulate the indispensable ABA increase under cold stress.

2009

2 páginas -- PAGS nros. 219-220

DNA BacterialAcclimatizationMutantArabidopsisCold acclimationPlant ScienceBiologyGenes Plantchemistry.chemical_compoundGene Expression Regulation PlantpolyamineFreezingCold acclimationputrescineMode of actionAnalysis of VarianceArabidopsis ProteinsReverse Transcriptase Polymerase Chain ReactionGene Expression ProfilingfungiWild typefood and beveragesfreezing toleranceArticle AddendumComplementationCold TemperatureMutagenesis InsertionalArginine decarboxylasechemistryBiochemistryABARNA PlantMutationPutrescinegene expressionPolyamineArginine decarboxylaseAbscisic AcidResearch ArticlePlant signalingbehavior
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Detection and organization of atrazine-degrading genetic potential of seventeen bacterial isolates belonging to divergent taxa indicate a recent comm…

2007

A collection of 17 atrazine-degrading bacteria isolated from soils was studied to determine the composition of the atrazine-degrading genetic potential (i.e. trzN, trzD and atz) and the presence of IS1071. The characterization of seven new atrazine-degrading bacteria revealed for the first time the trzN-atzBC gene composition in Gram-negative bacteria such as Sinorhizobium sp. or Polaromonas sp. Three main atrazine-degrading gene combinations (i) trzN– atzBC, (ii) atzABC– trzD and (iii) atzABCDEF were observed. The atz and trz genes were often located on plasmids, suggesting that plasmid conjugation could play an important role in their dispersion. In addition, the observation of these gene…

DNA BacterialGene Transfer HorizontalATRAZINEMolecular Sequence DataBIODEGRADATIONatrazine; insertion sequences; biodegradation; atz genes; trz genesBiologyMicrobiologyMicrobiologyEvolution MolecularTransposition (music)03 medical and health scienceschemistry.chemical_compoundPlasmidGram-Negative BacteriaATZ GENESGeneticsInsertion sequenceMolecular BiologyGeneSoil MicrobiologySEQUENCE D'INSERTION030304 developmental biologyRecombination GeneticGenetics0303 health sciencesINSERTION SEQUENCES030306 microbiologyCatabolismChromosomeSequence Analysis DNATRZ GENESbiology.organism_classification[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologychemistryGenes BacterialDNA Transposable ElementsMetabolic Networks and PathwaysDNABacteriaPlasmids
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Rapid 96-well plates DNA extraction and sequencing procedures to identify genome-wide transposon insertion sites in a difficult to lyse bacterium: La…

2014

International audience; Random transposon mutagenesis followed by adequate screening methods is an unavoidable procedure to characterize genetics of bacterial adaptation to environmental changes. We have recently constructed a mutant library of Lactobacillus casei and we aimed to fully annotate it. However, we have observed that, for L. casei which is a difficult to lyse bacterium, methods used to identify the transposon insertion site in a few mutants (transposon rescue by restriction and recircularization or PCR-based methods) were not transposable for a larger number because they are too time-consuming and sometimes not reliable. Here, we describe a method for large-scale and reliable id…

DNA BacterialGenetics MicrobialMicrobiology (medical)Transposable elementtransposon mutagenesisLactobacillus caseiSanger sequencingMutantMicrobiologyGenomeInsertional mutagenesis03 medical and health sciencesBacterial geneticsMESH: Gene LibraryLactic acid bacteriaMolecular BiologyDNA extractionMESH: High-Throughput Nucleotide SequencingGene Library030304 developmental biologyGenetics0303 health sciencesbiologyMESH: Lactobacillus casei030306 microbiologyHigh-Throughput Nucleotide SequencingMESH: Genetics Microbialbiology.organism_classificationDNA extractionMESH: DNA Bacterial[SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/BacteriologyLacticaseibacillus caseiMutagenesis Insertionalgenomic DNAMESH: DNA Transposable ElementsMESH: Mutagenesis InsertionalDNA Transposable ElementsTransposon mutagenesisLactobacillus casei
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Identification of a third secondary carrier (DcuC) for anaerobic C4-dicarboxylate transport in Escherichia coli: roles of the three Dcu carriers in u…

1996

In Escherichia coli, two carriers (DcuA and DcuB) for the transport of C4 dicarboxylates in anaerobic growth were known. Here a novel gene dcuC was identified encoding a secondary carrier (DcuC) for C4 dicarboxylates which is functional in anaerobic growth. The dcuC gene is located at min 14.1 of the E. coli map in the counterclockwise orientation. The dcuC gene combines two open reading frames found in other strains of E. coli K-12. The gene product (DcuC) is responsible for the transport of C4 dicarboxylates in DcuA-DcuB-deficient cells. The triple mutant (dcuA dcuB dcuC) is completely devoid of C4-dicarboxylate transport (exchange and uptake) during anaerobic growth, and the bacteria are…

DNA BacterialMutantMolecular Sequence DataBiologymedicine.disease_causeMicrobiologyGene productBacterial ProteinsmedicineEscherichia coliDicarboxylic AcidsAmino Acid SequenceAnaerobiosisMolecular BiologyEscherichia coliPeptide sequenceGeneDicarboxylic Acid TransportersBase SequenceSequence Homology Amino AcidEscherichia coli ProteinsChromosome MappingBiological Transportbiology.organism_classificationIsoenzymesOpen reading frameMutagenesis InsertionalBiochemistryC4-dicarboxylate transportCarrier ProteinsBacteriaResearch ArticleJournal of bacteriology
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Experimental conditions affect the site of tetrazolium violet reduction in the electron transport chain of Lactococcus lactis

2009

The reduction of tetrazolium salts to coloured formazans is often used as an indicator of cell metabolism during microbiology studies, although the reduction mechanisms have never clearly been established in bacteria. The objective of the present study was to identify the reduction mechanisms of tetrazolium violet (TV) in Lactococcus lactis using a mutagenesis approach, under two experimental conditions generally applied in microbiology: a plate test with growing cells, and a liquid test with non-growing (resting) cells. The results showed that in both tests, TV reduction resulted from electron transfer from an intracellular donor (mainly NADH) to TV via the electron transport chain (ETC), …

DNA Bacterial[SDV]Life Sciences [q-bio]Tetrazolium SaltsMicrobiologyElectron Transport03 medical and health scienceschemistry.chemical_compoundElectron transfer030304 developmental biology0303 health sciencesbiology030306 microbiologyLactococcus lactisNADH dehydrogenaseNADH DehydrogenaseVitamin K 2biology.organism_classificationNADElectron transport chainCulture MediaLactococcus lactisMutagenesis InsertionalMembranechemistryBiochemistryGenes Bacterialbiology.proteinFormazanOxidation-ReductionIntracellularBacteria
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