Search results for " islands"

showing 10 items of 322 documents

Promoter CpG island methylation of RET predicts poor prognosis in stage II colorectal cancer patients

2014

Abstract Improved prognostic stratification of patients with TNM stage II colorectal cancer (CRC) is desired, since 20–30% of high-risk stage II patients may die within five years of diagnosis. This study was conducted to investigate REarranged during Transfection ( RET ) gene promoter CpG island methylation as a possible prognostic marker for TNM stage II CRC patients. The utility of RET promoter CpG island methylation in tumors of stage II CRC patients as a prognostic biomarker for CRC related death was studied in three independent series (including 233, 231, and 294 TNM stage II patients, respectively) by using MSP and pyrosequencing. The prognostic value of RET promoter CpG island methy…

MaleCpg island methylationOncologyCancer Researchmedicine.medical_specialtyColonColorectal cancerBiologyBioinformaticsCell Line TumorInternal medicineGeneticsmedicineHumansStage (cooking)Promoter Regions GeneticneoplasmsResearch ArticlesAgedNeoplasm StagingProportional hazards modelRectumStage II Colorectal CancerPromoterGeneral MedicineMethylationDNA MethylationMiddle AgedPrognosismedicine.diseasedigestive system diseasesOncologyDNA methylationMolecular MedicineCpG IslandsFemaleColorectal NeoplasmsMolecular Oncology
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Effects of total dietary polyphenols on plasma nitric oxide and blood pressure in a high cardiovascular risk cohort. The PREDIMED randomized trial

2014

© 2014 Elsevier B.V. Background and aim: Hypertension is one of the main cardiovascular risk factors in the elderly. The aims of this work were to evaluate if a one-year intervention with two Mediterranean diets (Med-diet) could decrease blood pressure (BP) due to a high polyphenol consumption, and if the decrease in BP was mediated by plasma nitric oxide (NO) production. Methods and results: An intervention substudy of 200 participants at high cardiovascular risk was carried out within the PREDIMED trial. They were randomly assigned to a low-fat control diet or to two Med-diets, one supplemented with extra virgin olive oil (Med-EVOO) and the other with nuts (Med-nuts). Anthropometrics and …

MaleEndocrinology Diabetes and MetabolismMedicine (miscellaneous)government.political_districtDiet Mediterraneanlaw.inventionCohort StudiesRandomized controlled triallawRisk FactorsMedicineNutsDiet Fat-RestrictedBalearic islandsNutrition and DieteticsTraditional medicinefood and beveragesFood frequency questionnaireMiddle AgedUrinary polyphenolCardiovascular DiseasesCohortHypertensionBlood pressureChristian ministryFemalePrunusCardiology and Cardiovascular Medicinemedicine.medical_specialtyResearch groupsJuglansNitric OxideCorylusInternal medicineHumansPlant OilsOlive OilAgedbusiness.industryPolyphenolsPREDIMED studyNitric oxideOverweightPredimedCoronary heart diseaseSpaingovernmentbusinessBiomarkersFollow-Up Studies
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Relationship between diet and helminths in Gallotia caesaris (Sauria: Lacertidae)

2004

Diet and helminth fauna were analysed in Gallotia caesaris, a small lacertid lizard endemic to El Hierro (Canary Islands, Spain) in order to study the evolutionary and functional relationships between the two traits. This species is omnivorous but consumed a high proportion (82.13%) of plant matter including not only seeds but also leaves and other vegetative parts. Helminth fauna included many helminth species typical of herbivorous reptiles. Both herbivory and helminth presence were higher than expected for a lizard of its size. Comparison with other lacertids suggests that both traits result from an adaptation to insular conditions but that some "evolutionary time" to develop them is nee…

MaleFaunaBiologyHost-Parasite InteractionsHelminthsbiology.animalparasitic diseasesAtlantic IslandsAnimalsHelminthsLacertidaeBody Weights and MeasuresSauriaAnalysis of VarianceHerbivoreGallotiaEcologyLizardLizardsFeeding Behaviorbiology.organism_classificationDietFemaleAnimal Science and ZoologySeasonsOmnivoreHelminthiasis AnimalZoology
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Forward genetics inWolbachia: Regulation ofWolbachiaproliferation by the amplification and deletion of an addictive genomic island

2021

Copyright: © 2021 Duarte et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

MaleLife CyclesCancer ResearchPhysiologyEggsMutantForward geneticsQH426-470LarvaeReproductive PhysiologyTiter regulationGenomic islandreproductive and urinary physiologyGenetics (clinical)Gene EditingGenetics0303 health sciencesbiologyEukaryotaAnimal ModelsGenomicsPhenotype3. Good healthInsectsPhenotypeDrosophila melanogasterExperimental Organism SystemsDicistroviridaeOctomomFemaleDrosophilaWolbachiaDrosophila melanogasterWolbachiaResearch ArticleGenomic IslandsArthropodaLongevityGenomicsResearch and Analysis MethodsInvertebrate genomics03 medical and health sciencesModel Organismsparasitic diseasesGeneticsAnimalsSymbiosisMolecular BiologyEcology Evolution Behavior and Systematics030304 developmental biologyBacteria030306 microbiologyHost (biology)OrganismsBiology and Life SciencesSingle nucleotide polymorphismsbiochemical phenomena metabolism and nutritionbiology.organism_classificationInvertebratesBacterial LoadForward geneticsAnimal GenomicsAnimal StudiesbacteriaZoologyEntomologyGenome BacterialDevelopmental BiologyGenetic screen
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Description of Lifestyle, Including Social Life, Diet and Physical Activity, of People ≥90 years Living in Ikaria, a Longevity Blue Zone

2021

A cross-sectional observational study was conducted to describe the lifestyle of people ≥90 years, living in Evdilos or Raches, two municipalities of the Greek island of Ikaria, classified a longevity blue zone. The 71 participants were interviewed and underwent the Mediterranean Islands study food frequency questionnaire (MEDIS-FFQ) and the international physical activity questionnaire (IPAQ). The frequency of social contacts was daily for 77.9% of participants, weekly for 16.1%, and monthly for 5.9%. Most participants (90.0%) believed in God, and 81.4% took part in religious events. A total of 62.0% attended Panigiria festivals. Access to primary health care was considered difficult in th…

MaleMediterranean dietHealth Toxicology and Mutagenesismedia_common.quotation_subjectPhysical activityoldest old aged people030204 cardiovascular system & hematologyDiet MediterraneanArticleSocial life03 medical and health sciences0302 clinical medicinelongevityMedicineHumans030212 general & internal medicineExerciseLife Stylemedia_commonAgedAged 80 and overbusiness.industryPublic Health Environmental and Occupational HealthLongevityRSolidaritySocial relationIkariaCross-Sectional StudiesMedicineObservational studyFemaleMediterranean Islandsbusinesshealthy ageingDemographyInternational Journal of Environmental Research and Public Health
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Aberrant methylation within RUNX3 CpG island associated with the nuclear and mitochondrial microsatellite instability in sporadic gastric cancers. Re…

2007

Background: Gastric cancer (GC) development is a multistep process, during which numerous alterations accumulate in nuclear and mitochondrial DNA. A deficiency of repair machinery brings about an accumulation of errors introduced within simple repetitive microsatellite sequences during replication of DNA. Aberrant methylation is related to microsatellite instability (MSI) by the silencing of the hMLH1 gene. The aim of this study is to investigate a possible relationship between the RUNX3 promoter methylation, nuclear microsatellite instability (nMSI) and mitochondrial microsatellite instability (mtMSI), in order to clarify its biological role in GC. Patients and methods: nMSI and mtMSI were…

MaleMitochondrial DNAGC Rich SequenceBiologyDNA Mitochondriallaw.inventionlawStomach NeoplasmsmedicineHumansGenetic Predisposition to DiseaseProspective StudiesPolymerase chain reactionAgedCell NucleusCancerMicrosatellite instabilityHematologyMethylationDNA MethylationMiddle Agedmedicine.diseaseMolecular biologydigestive system diseasesCore Binding Factor Alpha 3 SubunitOncologyCpG siteMicrosatelliteCpG IslandsFemaleMicrosatellite InstabilityMicrosatellite Repeats
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Differences in DNA Methylation Patterns and Expression of the CCRK Gene in Human and Nonhuman Primate Cortices

2009

Changes in DNA methylation patterns during embryo development and differentiation processes are linked to the transcriptional plasticity of our genome. However, little is known about the evolutionary conservation of DNA methylation patterns and the evolutionary impact of epigenetic differences between closely related species. Here we compared the methylation patterns of CpG islands (CGIs) in the promoter regions of seven genes in humans and chimpanzees. We identified a block of CpGs in the cell cycle-related kinase (CCRK) gene that is more methylated in the adult human cortex than in the chimpanzee cortex and, in addition, it exhibits considerable intraspecific variation both in humans and …

MalePan troglodytesMolecular Sequence DataGene Expressionbiology.animalGeneticsAnimalsHumansEpigeneticsPromoter Regions GeneticMolecular BiologyGeneEcology Evolution Behavior and SystematicsGeneticsBase SequencebiologyPromoterMethylationDNA Methylationbiology.organism_classificationMacaca mulattaCyclin-Dependent KinasesFrontal LobeRhesus macaqueCpG siteDNA methylationCpG IslandsFemaleCyclin-Dependent Kinase-Activating KinasePapioBaboonMolecular Biology and Evolution
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Post-Messinian evolutionary relationships across the Sicilian channel: Mitochondrial and nuclear markers link a new green toad from Sicily to African…

2008

19 páginas, 6 figuras y 3 tables

MalePleistoceneEvolutionAfrica; Animals; Biodiversity; Bufonidae; DNA Mitochondrial; Evolution Molecular; Female; Male; Phylogeny; RNA Ribosomal 16S; SicilyRange (biology)BiogeographyPLEISTOCENESettore BIO/05 - ZoologiaZoologyDNA MitochondrialPHYLOGEOGRAPHYEvolution MolecularRNA Ribosomal 16SDNA POLYMORPHISMMTDNAQH359-425AnimalsSicilyPhylogenyREPTILIAEcology Evolution Behavior and SystematicsmtDNAnDNA green toadSALINITY CRISISmtDNA control regionPOPULATION-GROWTHbiologyBufo balearicusFROGSBiodiversitybiology.organism_classificationBufonidaelanguage.human_languageCOALESCENTPhylogeographyAfricalanguageFemaleBUFO-VIRIDISMediterranean IslandsSicilianResearch ArticleBMC Evolutionary Biology
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Sequence-based bioinformatic prediction and QUASEP identify genomic imprinting of the KCNK9 potassium channel gene in mouse and human

2007

Genomic imprinting is the epigenetic marking of gene subsets resulting in monoallelic or predominant expression of one of the two parental alleles according to their parental origin. We describe the systematic experimental verification of a prioritized 16 candidate imprinted gene set predicted by sequence-based bioinformatic analyses. We used Quantification of Allele-Specific Expression by Pyrosequencing (QUASEP) and discovered maternal-specific imprinted expression of the Kcnk9 gene as well as strain-dependent preferential expression of the Rarres1 gene in E11.5 (C57BL/6 3 Cast/Ei)F1 and informative (C57BL/6 3 Cast/ Ei) 3 C57BL/6 backcross mouse embryos. For the remaining 14 candidate impr…

MalePotassium ChannelsBiologyPolymorphism Single NucleotideGenomic ImprintingMiceChromosome 15Potassium Channels Tandem Pore DomainGeneticsAnimalsHumansEpigeneticsImprinting (psychology)AlleleMolecular BiologyGeneGenetics (clinical)GeneticsBase SequenceBrainComputational BiologySequence Analysis DNAGeneral MedicineDNA MethylationMice Inbred C57BLCpG siteDNA methylationCpG IslandsFemaleGenomic imprintingHuman Molecular Genetics
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Epigenetic Control of the foxp3 Locus in Regulatory T Cells

2007

Compelling evidence suggests that the transcription factor Foxp3 acts as a master switch governing the development and function of CD4+ regulatory T cells (Tregs). However, whether transcriptional control of Foxp3 expression itself contributes to the development of a stable Treg lineage has thus far not been investigated. We here identified an evolutionarily conserved region within the foxp3 locus upstream of exon-1 possessing transcriptional activity. Bisulphite sequencing and chromatin immunoprecipitation revealed complete demethylation of CpG motifs as well as histone modifications within the conserved region in ex vivo isolated Foxp3+CD25+CD4+ Tregs, but not in naïve CD25−CD4+ T cells. …

MaleQH301-705.5Bisulfite sequencingImmunologyMolecular Sequence Datachemical and pharmacologic phenomenaCell SeparationThymus GlandBiologyT-Lymphocytes RegulatoryGeneral Biochemistry Genetics and Molecular BiologyEpigenesis GeneticMiceTranscriptional regulationAnimalsEpigeneticsBiology (General)Regulation of gene expressionMice Inbred BALB CGeneral Immunology and MicrobiologyBase SequenceGeneral NeuroscienceInterleukin-2 Receptor alpha SubunitFOXP3Homo (human)hemic and immune systemsForkhead Transcription FactorsDNA MethylationFlow CytometryMolecular biologyMus (mouse)Cell biologyIn VitroDNA demethylationGene Expression RegulationDNA methylationCpG IslandsGeneral Agricultural and Biological SciencesChromatin immunoprecipitationResearch ArticlePLoS Biology
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