Search results for " life science"

showing 10 items of 12151 documents

Developmental aspects of morphological disparity dynamics: a simple analytical exploration

2011

15 pages; International audience; We devised a simple model for assessing the role of development in shaping the evolution of morphological disparity. Disparity of a clade at any given time is expressed in terms of the developmental dynamics that lead to the variety of adult morphotypes observed. We use assumed phenotypic manifestations of developmental processes, as they could be detected from allometric characterizations, to distinguish a few, nonexclusive types of evolutionary changes in ontogeny. On the basis of this formalization, we describe the diversification of hypothetical clades, using the standard curve of adult morphological disparity, the curve of juvenile disparity, and the c…

0106 biological sciences010506 paleontologyOntogenyeducationBiology010603 evolutionary biology01 natural sciences[ SDV.BDD.MOR ] Life Sciences [q-bio]/Development Biology/Morphogenesisfluids and secretionsSimple (abstract algebra)parasitic diseasesCladeEcology Evolution Behavior and Systematics[ SDU.STU.PG ] Sciences of the Universe [physics]/Earth Sciences/Paleontology0105 earth and related environmental sciences[ SDV.BID ] Life Sciences [q-bio]/BiodiversityEcologyEcologyPaleontology[SDV.BDD.MOR] Life Sciences [q-bio]/Development Biology/Morphogenesisbody regionsDevelopmental dynamicsAdult sizeEvolutionary biologyMetric (mathematics)[SDU.STU.PG] Sciences of the Universe [physics]/Earth Sciences/PaleontologyAllometryGeneral Agricultural and Biological Sciences[SDV.BID] Life Sciences [q-bio]/BiodiversityPaleobiology
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Phylogenetic practices among scholars of fossil cephalopods, with special reference to cladistics.

2004

12 pages; International audience

0106 biological sciences010506 paleontologyPhylogenetic treeZoologyBiologycephalopodsphylogeny[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy010603 evolutionary biology01 natural sciencesCladisticstaxonomyPhylogenetic PatternPhylogeneticsEvolutionary biology[SDV.BID.SPT] Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomyTaxonomy (biology)[SDU.STU.PG] Sciences of the Universe [physics]/Earth Sciences/Paleontology[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/Paleontology[ SDV.BID.SPT ] Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomyComputingMilieux_MISCELLANEOUScladistics0105 earth and related environmental sciences[ SDU.STU.PG ] Sciences of the Universe [physics]/Earth Sciences/Paleontology
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Toros-Menalla (Chad, 7 Ma), the earliest hominin-bearing area: how many mammal paleocommunities?

2014

12 pages; International audience; The fossiliferous area of Toros-Menalla (TM) (Djurab Desert, northern Chad) has yielded one of the richest African mammal faunas of the late Miocene. It is also the place where the earliest known hominin, Sahelanthropus tchadensis, was found. Although more than 300 localities are recorded in that area, previous paleoecological studies focused only on the largest and richest one. The integration of the material from other TM localities, and thus of a significant number of mammal taxa, is crucial to improve the corresponding paleoenvironmental reconstructions. Before such inferences can be drawn, it is necessary to test for the ecological integrity of these m…

0106 biological sciences010506 paleontologyTaphonomyEcological diversityChad[SDV.BID]Life Sciences [q-bio]/BiodiversityBiologyLate MioceneEnvironment010603 evolutionary biology01 natural sciencesPaleontologyAnimalsEcosystem diversityTaxonomic rankSamplingEcology Evolution Behavior and Systematics[ SDU.STU.PG ] Sciences of the Universe [physics]/Earth Sciences/Paleontology0105 earth and related environmental sciences[ SDV.BID ] Life Sciences [q-bio]/BiodiversityMammalsHomininaeEcologyFossilsHominidae15. Life on landbiology.organism_classificationBiotaMiocene mammalsTaxonHomininaeAnthropologyTaphonomyAfricaMammal[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/PaleontologySahelanthropus
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Within trophic level shifts in collagen-carbonate stable carbon isotope spacing are propagated by diet and digestive physiology in large mammal herbi…

2018

Stable carbon isotope analyses of vertebrate hard tissues such as bones, teeth, and tusks provide information about animal diets in ecological, archeological, and paleontological contexts. There is debate about how carbon isotope compositions of collagen and apatite carbonate differ in terms of their relationship to diet, and to each other. We evaluated relationships between δ13Ccollagen and δ13Ccarbonate among free-ranging southern African mammals to test predictions about the influences of dietary and physiological differences between species. Whereas the slopes of δ13Ccollagen–δ13Ccarbonate relationships among carnivores are ≤1, herbivore δ13Ccollag…

0106 biological sciences0301 basic medicine10253 Department of Small Animalsgrassmedicine.medical_treatmentZoologyBiology010603 evolutionary biology01 natural sciences2309 Nature and Landscape ConservationC3 C403 medical and health scienceschemistry.chemical_compoundLow-protein dietmedicineC3Ecology Evolution Behavior and SystematicsOriginal ResearchC4browseNature and Landscape ConservationTrophic levelHerbivore630 AgricultureEcologyδ13CStable isotope ratiomethane1105 Ecology Evolution Behavior and Systematics030104 developmental biologychemistry13. Climate actionIsotopes of carbon570 Life sciences; biologyCarbonateMammalprotein2303 EcologyEcology and Evolution
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Variation in the immune state of Gammarus pulex (Crustacea, Amphipoda) according to temperature: are extreme temperatures a stress?

2017

9 pages; International audience; Temperature is known to impact host-parasite interactions in various ways. Such effects are often regarded as the consequence of the increased metabolism of parasites with increasing temperature. However, the effect of temperature on hosts' immune system could also be a determinant. Here we assessed the influence of temperature on the immunocompetence of the crustacean amphipod Gammarus pulex. Amphipods play a key ecological role in freshwater ecosystems that can be altered by several parasites. We investigated the consequences of three weeks of acclimatization at four temperatures (from 9 °C to 17 °C) on different immunological parameters. Temperature influ…

0106 biological sciences0301 basic medicineAmphipodaHemocytesImmunologyHemocyteHemocyte010603 evolutionary biology01 natural sciencesFreshwater ecosystemAcclimatizationBacterial resistanceHost-Parasite Interactions03 medical and health sciencesImmune systemStress PhysiologicalCrustacea[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisAnimals[ SDV.IMM ] Life Sciences [q-bio]/ImmunologyAmphipodaEnvironmental conditions14. Life underwaterEcosystemGammarid[ SDE.BE ] Environmental Sciences/Biodiversity and EcologybiologyEcologyMonophenol MonooxygenaseTemperaturebiology.organism_classificationCrustaceanGammarus pulex030104 developmental biology13. Climate actionPhenoloxidase[SDV.IMM]Life Sciences [q-bio]/ImmunologyImmunocompetence[SDE.BE]Environmental Sciences/Biodiversity and EcologyImmunocompetenceDevelopmental Biology[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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A new genus for the eastern dwarf galagos (Primates: Galagidae).

2017

13 pages; International audience; The family Galagidae (African galagos or bushbabies) comprises five genera: EuoticusGray, 1872; GalagoGeoffroy Saint-Hilaire, 1796; GalagoidesSmith, 1833; OtolemurCoquerel, 1859; and SciurocheirusGray, 1872, none of which is regarded as monotypic, but some (Euoticus and Otolemur) certainly qualify as oligotypic. We argue for the recognition of a sixth genus, if the taxonomy is to reflect galagid evolution accurately. Genetic evidence has consistently demonstrated that the taxa currently referred to the genus Galagoides are not monophyletic but form two clades (a western and an eastern clade) that do not share an exclusive common ancestor; we review 20 years…

0106 biological sciences0301 basic medicineAnthropologyBiogeographybushbabyBushbaby Biogeography Craniodental morphometrics Galagoides Paragalago Molecular phylogeny Vocalisations[SDV.BID]Life Sciences [q-bio]/BiodiversityBiology010603 evolutionary biology01 natural sciencesFramework agreement03 medical and health sciencesGenusGalagoidesEcology Evolution Behavior and Systematicsbiogeographymolecular phylogeny[ SDV.BID ] Life Sciences [q-bio]/BiodiversityvocalizationsEcologycraniodental morphometricsCentral africaParagalago030104 developmental biologyMolecular phylogeneticsAnimal Science and ZoologyGalagoidesVocalisations
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Recombinant laccase from Pediococcus acidilactici CECT 5930 with ability to degrade tyramine

2017

Biogenic amines degradation by bacterial laccases is little known, so we have cloned and heterologously expressed, in E. coli, a new laccase from Pediococcus acidilactici CECT 5930 (Lpa5930), a lactic acid bacterium commonly found in foods able to degrade tyramine. The recombinant enzyme has been characterized by physical and biochemical assays. Here we report the optimization of expression and purification procedures of this laccase. DNA encoding sequence of laccase from P. acidilactici was amplified by PCR and cloned into the expression plasmid pET28a for induction by isopropyl-β-D-thiogalactoipyranoside. Protein expression was performed in E. coli BL21(DE3) harboring pGro7 plasmid expres…

0106 biological sciences0301 basic medicineArabinoseMolecular biologylcsh:MedicineLaccasesBiochemistryBiotecnologia01 natural sciencesSubstrate Specificitylaw.inventionDatabase and Informatics Methodschemistry.chemical_compoundlawRecombinant Protein PurificationCloning MolecularAmineslcsh:Sciencechemistry.chemical_classificationMultidisciplinaryABTSbiologyOrganic CompoundsTemperatureHydrogen-Ion ConcentrationTyramineRecombinant ProteinsEnzymesChemistryRecombination-Based AssayBiochemistryPhysical SciencesRecombinant DNAElectrophoresis Polyacrylamide GelOxidation-ReductionSequence AnalysisResearch ArticleProtein PurificationBioinformaticsTyramineLibrary ScreeningDNA constructionResearch and Analysis Methods03 medical and health sciencesBacterial ProteinsSequence Motif Analysis010608 biotechnologyAmino Acid SequenceBenzothiazolesPediococcus acidilacticiLaccaseMolecular Biology Assays and Analysis TechniquesBase SequenceMolecular massLaccaseOrganic Chemistrylcsh:RChemical CompoundsBiology and Life SciencesProteinsPediococcus acidilacticiSequence Analysis DNAbiology.organism_classificationMolecular biology techniques030104 developmental biologyEnzymechemistryPlasmid ConstructionEnzymologySpectrophotometry Ultravioletlcsh:QSulfonic AcidsEnzimsProteïnesPurification TechniquesPLOS ONE
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Ocean acidification at a coastal CO2 vent induces expression of stress-related transcripts and transposable elements in the sea anemone Anemonia viri…

2019

Published version, available at: https://doi.org/10.1371/journal.pone.0210358 Ocean acidification threatens to disrupt interactions between organisms throughout marine ecosystems. The diversity of reef-building organisms decreases as seawater CO2 increases along natural gradients, yet soft-bodied animals, such as sea anemones, are often resilient. We sequenced the polyA-enriched transcriptome of adult sea anemone Anemonia viridis and its dinoflagellate symbiont sampled along a natural CO2 gradient in Italy to assess stress levels in these organisms. We found that about 1.4% of the anemone transcripts, but only ~0.5% of the Symbiodinium sp. transcripts were differentially expressed. Processe…

0106 biological sciences0301 basic medicineAtmospheric ScienceMolecular biologyMarine and Aquatic SciencesGene ExpressionRetrotransposonSea anemone01 natural sciencesAnemoniaSequencing techniquesMobile Genetic ElementsMultidisciplinarybiologyQREukaryotaOcean acidificationAnemoneRNA sequencingGenomicsChemistryRetrotransposonsPhysical SciencesMedicineTranscriptome AnalysisResearch ArticleScienceZoology010603 evolutionary biology03 medical and health sciencesGreenhouse GasesCnidariaGenetic ElementsSea WaterGeneticsVDP::Matematikk og Naturvitenskap: 400::Basale biofag: 470Environmental ChemistryAnimalsMarine ecosystemBiology and life sciencesEcology and Environmental SciencesDinoflagellateChemical CompoundsOrganismsTransposable ElementsCorrectionAquatic EnvironmentsComputational BiologyCarbon Dioxidebiology.organism_classificationGenome AnalysisMarine EnvironmentsInvertebratesVDP::Mathematics and natural science: 400::Basic biosciences: 470Research and analysis methods:Genetikk og genomikk: 474 VDP::Marinbiologi:497 VDP::Økologi:488 [VDP]030104 developmental biologySea AnemonesMolecular biology techniquesAtmospheric ChemistryEarth SciencesSeawater
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Survival and gene expression under different temperature and humidity regimes in ants

2017

Short term variation in environmental conditions requires individuals to adapt via changes in behavior and/or physiology. In particular variation in temperature and humidity are common, and the physiological adaptation to changes in temperature and humidity often involves alterations in gene expression, in particular that of heat-shock proteins. However, not only traits involved in the resistance to environmental stresses, but also other traits, such as immune defenses, may be influenced indirectly by changes in temperature and humidity. Here we investigated the response of the ant F. exsecta to two temperature regimes (20 degrees C & 25 degrees C), and two humidity regimes (50% & 75%), for…

0106 biological sciences0301 basic medicineAtmospheric ScienceympäristöAcclimatizationGene Expressionlcsh:MedicinemuutosALFALFA LEAFCUTTING BEEBiochemistryImmune Receptors01 natural sciencesEndocrinologyACCLIMATIONmuurahaisetGene expressionMedicine and Health SciencesIMMUNE-RESPONSEInsulinTRANSCRIPTIONgeeniekspressiolcsh:SciencePOPULATIONHeat-Shock ProteinsProtein MetabolismsopeutuminenPrincipal Component Analysiseducation.field_of_studyImmune System ProteinsMultidisciplinaryBehavior AnimalEcologyolosuhteetTemperaturefood and beveragesANThumanitiesInsectsimmuunijärjestelmä1181 Ecology evolutionary biologyPhysical SciencesMEGACHILE-ROTUNDATAlämpötilaympäristönmuutoksetResearch ArticleNutrient and Storage ProteinsSignal TransductionArthropodaImmunologyPopulationZoologyBiology010603 evolutionary biologyAcclimatization03 medical and health sciencesMeteorologyTwo temperatureStress PhysiologicalGeneticsAnimalseducationGeneProportional Hazards ModelsDiabetic EndocrinologyAntsBEAUVERIA-BASSIANAGene Expression Profilinglcsh:ROrganismshumidityBiology and Life SciencesProteinsHumiditytemperatureHumidityEigenvaluesCell BiologyDESICCATIONInvertebratesHymenopteraHormonesMetabolismAlgebra030104 developmental biologyGene Expression RegulationLinear AlgebraDROSOPHILA-MELANOGASTERkosteusEarth Sciencesgene expressionta1181lcsh:QFormica exsectaDesiccationRESISTANCEMathematics
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Chloroplast genomes of Rubiaceae: Comparative genomics and molecular phylogeny in subfamily Ixoroideae.

2020

In Rubiaceae phylogenetics, the number of markers often proved a limitation with authors failing to provide well-supported trees at tribal and generic levels. A robust phylogeny is a prerequisite to study the evolutionary patterns of traits at different taxonomic levels. Advances in next-generation sequencing technologies have revolutionized biology by providing, at reduced cost, huge amounts of data for an increased number of species. Due to their highly conserved structure, generally recombination-free, and mostly uniparental inheritance, chloroplast DNA sequences have long been used as choice markers for plant phylogeny reconstruction. The main objectives of this study are: 1) to gain in…

0106 biological sciences0301 basic medicineChloroplastsPlant GenomesCoffeaRubiaceaePlant SciencePlant Genetics01 natural sciencesGenomePlant GenomicsPlastidsGenome EvolutionPhylogenyData ManagementMultidisciplinaryIxoroideaeQDNA ChloroplastRHigh-Throughput Nucleotide Sequencingfood and beveragesPhylogenetic AnalysisGenomicsPhylogeneticsChloroplast DNAEngineering and TechnologyMedicineGenome PlantResearch ArticleBiotechnologyGenome evolutionComputer and Information SciencesNuclear genePlant Cell BiologyScienceGenomicsBioengineeringBiology010603 evolutionary biologyPolymorphism Single NucleotideMolecular EvolutionEvolution Molecular03 medical and health sciencesChloroplast GenomeGeneticsEvolutionary SystematicsGenome ChloroplastTaxonomyComparative genomicsEvolutionary BiologyBiology and Life SciencesComputational BiologyCell BiologySequence Analysis DNAComparative Genomicsbiology.organism_classificationGenome AnalysisGenomic Libraries030104 developmental biologyEvolutionary biologyPlant BiotechnologyReference genomePLoS ONE
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