Search results for " modeling"

showing 10 items of 2411 documents

The influence of temperature model assumptions on the prognosis accuracy of extinction risk

2000

Abstract For a species whose abundance is well-known to correlate on the degree of heat different temperature model assumptions may affect the prognosis accuracy of persistence. Likewise, year-to-year autocorrelations in weather fluctuations are known to decrease extinction risk. Thus, we investigated the grey bush cricket Platycleis albopunctata . For this species is known that growth and reproduction is mainly influenced by temperature. We developed a stochastic individual based model for the bush cricket. This day–degree model described the demographic growth of the species that depends on temperature. Daily temperatures were generated by five different methods: (i) temperatures were seq…

0106 biological scienceseducation.field_of_studyExtinction010504 meteorology & atmospheric sciencesStochastic modellingEcologyEcological ModelingPopulationAutocorrelation010603 evolutionary biology01 natural sciencesDegree (temperature)Normal distribution13. Climate actionMinimum viable populationAbundance (ecology)Statisticseducation0105 earth and related environmental sciencesMathematicsEcological Modelling
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Non-unique population dynamics: basic patterns

2000

We review the basic patterns of complex non-uniqueness in simple discrete-time population dynamics models. We begin by studying a population dynamics model of a single species with a two-stage, two-habitat life cycle. We then explore in greater detail two ecological models describing host‐macroparasite and host‐parasitoid interspecific interactions. In general, several types of attractors, e.g. point equilibria vs. chaotic, periodic vs. quasiperiodic and quasiperiodic vs. chaotic attractors, may coexist in the same mapping. This non-uniqueness also indicates that the bifurcation diagrams, or the routes to chaos, depend on initial conditions and are therefore non-unique. The basins of attrac…

0106 biological scienceseducation.field_of_studyMathematical modelEcologyEcological ModelingPopulationChaoticBiologyBifurcation diagram010603 evolutionary biology01 natural sciences010601 ecologyFractalAnimal ecologyQuasiperiodic functionAttractorStatistical physicseducationEcological Modelling
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Resource use of wood-inhabiting fungi in different boreal forest types

2017

Generalist species are usually widespread and abundant, and thrive in heterogeneous environments. Specialists, in turn, are generally more restricted in their range, and benefit from more stable conditions. Therefore, increasing human-induced disturbance can have more negative effects on specialist than generalist species. We assessed the specialization of 77 wood-inhabiting fungal species across seven boreal forest types and different substratum qualities. A significantly higher number of specialist species was associated with herb-rich forests and afforested fields than with managed coniferous forests and wood pastures, the number of specialists associated with natural coniferous forests …

0106 biological sciencesgeneralist speciesEnvironmental changeRange (biology)ta1172Forest managementPlant Sciencemanaged forestBiologyGeneralist and specialist species010603 evolutionary biology01 natural sciencesspecialist speciessukupuuttoon kuoleminenlajitEcology Evolution Behavior and Systematicssopeutuminenhavumetsätuhanalaiset lajiterikoistuminenEcologyEcologyEcological Modelingcoarse woody debrisTaigaympäristönsuojelu15. Life on landta4112natural forestluonnon monimuotoisuusfine woody debrisHabitatDisturbance (ecology)ta1181Coarse woody debriscorticioidssienetorvakatympäristönmuutokset010606 plant biology & botanyFungal Ecology
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Biogeography of arbuscular mycorrhizal fungal spore traits along an aridity gradient, and responses to experimental rainfall manipulation

2020

Abstract Spore size, colour and melanin content are hypothesised to be functional in relation to environmental stress. Here, we studied AM fungal spores in arid environments of Australia and in an experimental platform simulating altered rainfall. We used microscopy and image analysis to measure spore colour and size, and a quantitative colorimetric assay to estimate melanin content in spores. In arid sites, melanin content tended to increase with increasing aridity. We observed a large range of spore colours at all sites but found a higher proportion of both dark and light spores, and fewer intermediate colours, in drier sites. Spore abundance and size varied among sites, but neither were …

0106 biological sciencesgeographygeography.geographical_feature_categoryEcologyEcological ModelingBiogeographyfungiPlant ScienceBiology010603 evolutionary biology01 natural sciencesEnvironmental stressAridhumanitiesGrasslandSporeAbundance (ecology)BotanyLife historyArbuscular mycorrhizalEcology Evolution Behavior and Systematics010606 plant biology & botanyFungal Ecology
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Modelling sensitive elasmobranchs habitat

2013

Basic information on the distribution and habitat preferences of ecologically important species is essential for their management and protection. In the Mediterranean Sea there is increasing concern over elasmobranch species because their biological (ecological) characteristics make them highly vulnerable to fishing pressure. Their removal could affect the structure and function of marine ecosystems, inducing changes in trophic interactions at the community level due to the selective elimination of predators or prey species, competitors and species replacement. In this study Bayesian hierarchical spatial models are used to map the sensitive habitats of the three most caught elasmobranch spe…

0106 biological scienceshttp://aims.fao.org/aos/agrovoc/c_28840Etmopterus spinaxhabitatAquatic ScienceDistribution des populationshttp://aims.fao.org/aos/agrovoc/c_38371OceanographyGaleus melastomus010603 evolutionary biology01 natural sciencesElasmobranch habitatPredationMediterranean seahttp://aims.fao.org/aos/agrovoc/c_38127http://aims.fao.org/aos/agrovoc/c_3041Scyliorhinus caniculaMediterranean SeaVulnerable speciesMarine ecosystem14. Life underwaterhttp://aims.fao.org/aos/agrovoc/c_4699Ecology Evolution Behavior and Systematicshttp://aims.fao.org/aos/agrovoc/c_12399Trophic levelhttp://aims.fao.org/aos/agrovoc/c_6113biologyEcologyU10 - Informatique mathématiques et statistiques010604 marine biology & hydrobiologyScyliorhinus caniculabiology.organism_classificationBiologie marinetechnique de prévisionBayesian hierarchical spatial modelSpecies distribution modelingFisheryHabitatThéorie bayésienneGaleus melastomusM40 - Écologie aquatiquehttp://aims.fao.org/aos/agrovoc/c_10566http://aims.fao.org/aos/agrovoc/c_3456http://aims.fao.org/aos/agrovoc/c_38117Elasmobranchii
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Interaction between Medicago truncatula and Pseudomonas fluorescens: evaluation of costs and benefits across an elevated atmospheric CO2.

2012

10 pages; International audience; Soil microorganisms play a key role in both plants nutrition and health. Their relation with plant varies from mutualism to parasitism, according to the balance of costs and benefits for the two partners of the interaction. These interactions involved the liberation of plant organic compounds via rhizodeposition. Modification of atmospheric CO2 concentration may affect rhizodeposition and as a consequence trophic interactions that bind plants and microorganisms. Positive effect of elevated CO2 on plants are rather well known but consequences for micoorganisms and their interactions with plants are still poorly understood. A gnotobiotic system has been devel…

0106 biological scienceslcsh:MedicineplantPlant Science01 natural sciencesPlant RootsPlant reproductionnitrogenPlant Microbiologyterrestrial ecosystem[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/Symbiosislcsh:ScienceSoil Microbiology2. Zero hungerMutualism (biology)Abiotic componentPlant Growth and Development0303 health sciencesRhizospheredynamicMultidisciplinaryresponsebiologyEcologyfood and beveragesMedicago truncatulacarbon-dioxide;terrestrial ecosystem;development;dynamic;nitrogen;plant;soil;rhizosphere;response;Pseudomonas fluorescensSeedsSoil microbiologyEcosystem FunctioningResearch Article[ SDV.SA.SDS ] Life Sciences [q-bio]/Agricultural sciences/Soil studyPseudomonas fluorescensFlowers[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil studycarbon-dioxidePseudomonas fluorescensMicrobiologyEcosystemsMicrobial Ecologysoil03 medical and health sciencesSymbiosisPlant-Environment InteractionsBotanyMedicago truncatulaSymbiosisBiologydevelopment030304 developmental biology[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyAnalysis of VarianceAtmospherePlant Ecologylcsh:RfungiComputational Biology15. Life on landCarbon Dioxidebiology.organism_classificationPlant LeavesAgronomylcsh:Q[SDE.BE]Environmental Sciences/Biodiversity and EcologyrhizosphereEcosystem Modeling010606 plant biology & botany[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Common Bottlenose Dolphin Protection and Sustainable Boating: Species Distribution Modeling for Effective Coastal Planning

2020

Indicators for preserving marine biodiversity include knowledge of how the spatial distribution and critical habitats of species overlap with human activities and impacts. Such indicators are key tools for marine spatial planning, a process that identifies and resolves conflicts between human uses and the conservation of marine environments. The common bottlenose dolphin in the Mediterranean Sea is considered a vulnerable species by the IUCN Red List and a priority species of the EU Habitat Directive. Here, we estimated spatio-temporal patterns of the species occurrence in the area around one Marine Protected Area (MPA) and two Sites of Community Importance (SCI) of the North western Sardin…

0106 biological scienceslcsh:QH1-199.5010504 meteorology & atmospheric sciencesSpecies distributionOcean Engineeringspecies distribution modelinglcsh:General. Including nature conservation geographical distributionAquatic ScienceOceanography01 natural sciencesoverlap analysisIUCN Red ListVulnerable specieslcsh:Science0105 earth and related environmental sciencesWater Science and TechnologyGlobal and Planetary Changebiology010604 marine biology & hydrobiologyMarine spatial planningBottlenose dolphinbiology.organism_classificationEnvironmental niche modellingFisheryGeographyTursiops truncatusHabitatprotection effectivenesslcsh:QMarine protected areamarine spatial planningmarine protected areasFrontiers in Marine Science
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Spatiotemporal Dispersal and Deposition of Fish Farm Wastes: A Model Study from Central Norway

2017

Abstract A spatially explicit coupled hydrodynamic-mass transport model system was used to simulate dispersal of particulate organic matter from Atlantic salmon (Salmo salar) farming in central Norway. Model setups of 32 m horizontal resolution were run for periods of up to 650 days for 3 sites of different oceanographic characteristics: one fjord location, one medium-exposed location influenced by fjord water and one coastal location. Records on feed used for each cage at each location were converted to feces released based on a published mass balance model. The results from the simulations were compared with scores from corresponding mandatory benthic surveys (MOM-B) of the sediment layer…

0106 biological scienceslcsh:QH1-199.5environmental effectsOcean EngineeringFjordlcsh:General. Including nature conservation geographical distributionAquatic ScienceOceanography01 natural sciencesDeposition (geology)SettlingMarine ScienceOrganic matterSalmolcsh:ScienceWater Science and Technologychemistry.chemical_classificationHydrologyGlobal and Planetary Changegeographygeography.geographical_feature_categorybiologyaquaculture effects010604 marine biology & hydrobiologySediment04 agricultural and veterinary sciencesbiology.organism_classificationFisheryfish farm wasteschemistryBenthic zonehydrodynamic modeling040102 fisheries0401 agriculture forestry and fisheriesBiological dispersalEnvironmental sciencelcsh:Qdepositional modelaquaculture dispersal model
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A multi-site study to classify semi-natural grassland types

2009

International audience; Calibration and validation of simulation models describing herbage growth or feed quality of seminatural grasslands is a complex task for agronomists without investing effort into botanical surveys. To facilitate such modelling efforts, a limited number of grassland types were identified using a functional classification of species. These grassland types were characterized by three descriptors required to model herbage growth or feed quality: the abundance-weighted mean leaf dry matter content across grass species, the relative abundance of grasses, and an estimate of species richness. We conducted a multi-site analysis over 749 grasslands from eight temperate region…

0106 biological sciencesleaf traitsRestricted maximum likelihoodManagement type01 natural sciencesGrasslandnitrogenland-use changeNutrientSemi-natural grasslandphosphorus2. Zero hunger[SDV.EE]Life Sciences [q-bio]/Ecology environmentgeography.geographical_feature_categoryEcology04 agricultural and veterinary sciencesVegetationClassification[ SDE.MCG ] Environmental Sciences/Global ChangesFunctional traitsplant-species richnessgrowth[SDE.MCG]Environmental Sciences/Global Changespermanent pastures[SDV.BID]Life Sciences [q-bio]/Biodiversity010603 evolutionary biologyEllenberg indicator values[ SDV.EE ] Life Sciences [q-bio]/Ecology environmentdiversity[SDV.EE.ECO]Life Sciences [q-bio]/Ecology environment/EcosystemsTemperate climateRelative species abundance[ SDV.BID ] Life Sciences [q-bio]/Biodiversitygeography[ SDE.BE ] Environmental Sciences/Biodiversity and EcologySimulation modelingNutrients15. Life on land[SDE.ES]Environmental Sciences/Environmental and Society[ SDV.EE.ECO ] Life Sciences [q-bio]/Ecology environment/EcosystemsAgronomy040103 agronomy & agricultureresponses0401 agriculture forestry and fisheriesEnvironmental scienceAnimal Science and ZoologySpecies richness[SDE.BE]Environmental Sciences/Biodiversity and EcologyAgronomy and Crop Science[ SDE.ES ] Environmental Sciences/Environmental and SocietySpecies richness
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Responses of above- and below-ground fungal symbionts to cessation of mowing in subalpine grassland

2017

Abstract The cessation of mowing in subalpine grasslands promotes the dominance of Festuca paniculata leading to the reduction in plant diversity. Moreover, it affects positively the abundance of Epichloe sp. inhabiting F. paniculata leaves and negatively the soil density of arbuscular mycorrhizal fungi (AMF). We explored how the cessation of mowing influences root AMF communities in F. paniculata and the neighboring plants, and Epichloe sp alkaloids. Thirteen AMF operational taxonomical units were found. The neighboring plants affected positively the abundances of Aalpin and GLOM_7 whereas the interaction plant/management type influenced significantly Claroide_1 , GLOM_1 and GLOM_7 . The N…

0106 biological sciencesprairie alpine[SDV]Life Sciences [q-bio]alpine grasslandsPlant ScienceBiologychampignon mycorhizien010603 evolutionary biology01 natural sciencesEndophyteGrasslandEpichloe sp.BotanyFestuca paniculataDominance (ecology)symbioteEcology Evolution Behavior and SystematicsArbuscular mycorrhizal fungal communityPlant diversity2. Zero hungergeographygeography.geographical_feature_categoryEcology[ SDV ] Life Sciences [q-bio]Ecological ModelingEndophyte fungi15. Life on landbiology.organism_classificationBulk densityGrassland dynamicssymbiontMontane ecologychampignon endophyte010606 plant biology & botany
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