Search results for " partial"

showing 10 items of 356 documents

Compression-based classification of biological sequences and structures via the Universal Similarity Metric: experimental assessment.

2007

Abstract Background Similarity of sequences is a key mathematical notion for Classification and Phylogenetic studies in Biology. It is currently primarily handled using alignments. However, the alignment methods seem inadequate for post-genomic studies since they do not scale well with data set size and they seem to be confined only to genomic and proteomic sequences. Therefore, alignment-free similarity measures are actively pursued. Among those, USM (Universal Similarity Metric) has gained prominence. It is based on the deep theory of Kolmogorov Complexity and universality is its most novel striking feature. Since it can only be approximated via data compression, USM is a methodology rath…

Computer scienceAlgorismesPrediction by partial matchingCompression dissimilaritycomputer.software_genreBiochemistryProtein Structure SecondaryPhylogenetic studiesStructural BiologySequence Analysis ProteinDatabases Proteinlcsh:QH301-705.5Biological dataNCDApplied MathematicsGenomicsClassificationCDComputer Science ApplicationsBenchmarking:Informàtica::Informàtica teòrica [Àrees temàtiques de la UPC]Universal compression dissimilarityArea Under CurveMetric (mathematics)lcsh:R858-859.7Data miningAlgorithmsData compressionResearch Article:Informàtica::Aplicacions de la informàtica::Bioinformàtica [Àrees temàtiques de la UPC]Normalization (statistics)lcsh:Computer applications to medicine. Medical informaticsBioinformatics Sequence Alignment AlgorithmsSet (abstract data type)Similarity (network science)Normalized compression sissimilarityData compression (Computer science)AnimalsHumansAmino Acid SequenceMolecular BiologyBiologyDades -- Compressió (Informàtica)USMUniversal similarity metricProteinsUCDProtein Structure TertiaryData setGenòmicaStatistical classificationlcsh:Biology (General)ROC CurvecomputerSequence AlignmentSoftwareBMC bioinformatics
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The Fate of Nephrons in Congenital Obstructive Nephropathy: Adult Recovery is Limited by Nephron Number

2014

Background: Pediatric chronic kidney disease (CKD) is most often due to congenital anomalies of the kidneys and urinary tract (CAKUT), and obstructive nephropathy is the leading cause. Progression to renal failure, however, is more likely to develop in adulthood than childhood (Wuhl, CJASN 8: 67–74, 2013). Frequently associated with CAKUT, reduced nephron number (NN) at birth is an independent risk factor for adult CKD. Methods: To determine the role of NN in progression of congenital obstructive nephropathy, wild-type (WT) and reduced NN mice (Os/+) were subjected to sham operation or partial unilateral ureteral obstruction (UUO) in the first 2 days of life (prior to completion of nephroge…

Congenital partial UUOnephron lossrenal failure
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A Polynomial Approach to the Piecewise Hyperbolic Method

2003

In this paper, a local (third-order accurate) shock capturing method for hyperbolic conservation laws is presented. The method has been made with the same idea as the PHM method, but with a simpler reconstruction. A comparison with the classic high order methods is discussed.

Conservation lawPolynomialMechanical EngineeringHyperbolic functionMathematical analysisComputational MechanicsEnergy Engineering and Power TechnologyAerospace EngineeringCondensed Matter PhysicsMechanics of MaterialsShock capturing methodPiecewiseHigh orderHyperbolic partial differential equationMathematicsInternational Journal of Computational Fluid Dynamics
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The exact finite‐difference scheme for vector boundary‐value problems with piece‐wise constant coefficients

1998

We will consider the exact finite‐difference scheme for solving the system of differential equations of second order with piece‐wise constant coefficients. It is well‐known, that the presence of large parameters at first order derivatives or small parameters at second order derivatives in the system of hydrodynamics and magnetohydrodynamics (MHD) equations (large Reynolds, Hartmann and others numbers) causes additional difficulties for the applications of general classical numerical methods. Thus, important to work out special methods of solution, the so‐called uniform converging computational methods. This gives a basis for the development of special monotone finite vector‐difference schem…

Constant coefficientsPartial differential equationDifferential equationNumerical analysisMathematical analysisOrder of accuracy-Modeling and SimulationQA1-939PiecewiseBoundary value problemMathematicsAnalysisMathematicsNumerical partial differential equationsMathematical Modelling and Analysis
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Uncertainty quantification analysis of the biological Gompertz model subject to random fluctuations in all its parameters

2020

[EN] In spite of its simple formulation via a nonlinear differential equation, the Gompertz model has been widely applied to describe the dynamics of biological and biophysical parts of complex systems (growth of living organisms, number of bacteria, volume of infected cells, etc.). Its parameters or coefficients and the initial condition represent biological quantities (usually, rates and number of individual/particles, respectively) whose nature is random rather than deterministic. In this paper, we present a complete uncertainty quantification analysis of the randomized Gomperz model via the computation of an explicit expression to the first probability density function of its solution s…

Continuity partial differential equationStationary distributionDynamical systems theoryStochastic processGeneral MathematicsApplied MathematicsGompertz functionProbabilistic logicGeneral Physics and AstronomyStatistical and Nonlinear PhysicsProbability density function01 natural sciences010305 fluids & plasmasComplex systems with uncertainties0103 physical sciencesLiouville-Gibbs theoremApplied mathematicsInitial value problemUncertainty quantificationRandom nonlinear differential equationMATEMATICA APLICADA010301 acousticsMathematicsRandomized Gompertz model
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The interrelation between stochastic differential inclusions and set-valued stochastic differential equations

2013

Abstract In this paper we connect the well established theory of stochastic differential inclusions with a new theory of set-valued stochastic differential equations. Solutions to the latter equations are understood as continuous mappings taking on their values in the hyperspace of nonempty, bounded, convex and closed subsets of the space L 2 consisting of square integrable random vectors. We show that for the solution X to a set-valued stochastic differential equation corresponding to a stochastic differential inclusion, there exists a solution x for this inclusion that is a ‖ ⋅ ‖ L 2 -continuous selection of X . This result enables us to draw inferences about the reachable sets of solutio…

Continuous-time stochastic processApplied MathematicsMathematical analysisStochastic calculusMalliavin calculusStochastic partial differential equationsymbols.namesakeStochastic differential equationDifferential inclusionRunge–Kutta methodsymbolsApplied mathematicsAnalysisMathematicsAlgebraic differential equationJournal of Mathematical Analysis and Applications
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Ambit processes and stochastic partial differential equations

2011

Ambit processes are general stochastic processes based on stochastic integrals with respect to Levy bases. Due to their flexible structure, they have great potential for providing realistic models for various applications such as in turbulence and finance. This papers studies the connection between ambit processes and solutions to stochastic partial differential equations. We investigate this relationship from two angles: from the Walsh theory of martingale measures and from the viewpoint of the Levy noise analysis.

Continuous-time stochastic processwhite noise analysisambit processesstochastic partial differential equationsStochastic modellingMathematical analysisStochastic calculusMalliavin calculusStochastic partial differential equationStochastic differential equationmartingale measuresMathematics::ProbabilityLocal martingaleLévy basesApplied mathematicsMartingale (probability theory)Mathematics
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L’impatto della pandemia sui rapporti contrattuali: problemi e rimedi

2021

This paper aims to analyze the global disaster caused by the COVID-19 pandemic that has disrupted the existence of almost all of humanity. In addition, examine the significant limitations limitations on individual and collective freedoms to protect public health and, secondly, to mitigate as much as possible the impact of the pandemic on economic activities. The attention of the article focuses exclusively on the rules that impact on the general discipline of obligations and contracts. The essay deals with the institutions of contract law that are best suited to counteract the effects of the pandemic on contractual relationships, especially those long term. Particular attention is paid to t…

Contract Obligations COVID-19 pandemic Impossibility of Performance Partial Termination Renegotiation Commercial Lease ContractsSettore IUS/01 - Diritto Privato
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Energy Efficiency Evaluation of Dynamic Partial Reconfiguration in Field Programmable Gate Arrays: An Experimental Case Study

2018

Both computational performances and energy efficiency are required for the development of any mobile or embedded information processing system. The Internet of Things (IoT) is the latest evolution of these systems, paving the way for advancements in ubiquitous computing. In a context in which a large amount of data is often analyzed and processed, it is mandatory to adapt node logic and processing capabilities with respect to the available energy resources. This paper investigates under which conditions a partially reconfigurable hardware accelerator can provide energy saving in complex processing tasks. The paper also presents a useful analysis of how the dynamic partial reconfiguration te…

Control and Optimizationvideo filteringComputer sciencedigital signal processingEnergy Engineering and Power TechnologyDigital signal processing; Dynamic partial reconfiguration; Energy efficiency; Field Programmable Gate Array; Video filtering02 engineering and technologylcsh:Technology0202 electrical engineering electronic engineering information engineeringElectrical and Electronic EngineeringField-programmable gate arrayEngineering (miscellaneous)Digital signal processingenergy efficiencyField Programmable Gate Arraybusiness.industryRenewable Energy Sustainability and the Environmentlcsh:Tenergy efficiency; dynamic partial reconfiguration; Field Programmable Gate Array; digital signal processing; video filteringControl reconfiguration020206 networking & telecommunicationsEnergy consumptionReconfigurable computingdynamic partial reconfigurationEmbedded system020201 artificial intelligence & image processingNode (circuits)businessEnergy (signal processing)Efficient energy useEnergy (miscellaneous)Energies
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Spatial seismic point pattern analysis with Integrated Nested Laplace Approximation

2020

This paper proposes the use of Integrated Nested Laplace Approximation (Rue et al., 2009) to describe the spatial displacement of earthquake data. Specifying a hiechical structure of the data and parameters, an inhomogeneuos Log-Gaussian Cox Processes model is applied for describing seismic events occurred in Greece, an area of seismic hazard. In this way, the dependence of the spatial point process on external covariates can be taken into account, as well as the interaction among points, through the estimation of the parameters of the covariance of the Gaussian Random Field, with a computationally efficient approach.

Cox proceIntegrated Nested Laplace ApproximationSettore SECS-S/01 - StatisticaSpatial Point ProceSeismologyStochastic Partial Differential Equation
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