Search results for " sequence"
showing 10 items of 3643 documents
Discrimination of serial auditory patterns in rats : roles of configural and elemental associations
2011
In order to test whether rats could discriminate between tone sequences, food deprived rats were given appetitive discrimination conditioning with repeated ascending or descending series of musical notes serving as conditioned stimuli (CSs). The other type of tone sequence was reinforced as the other was followed by nothing. In Experiment 1, each series of 8 tones formed a 2 s cycle. The cycle was repeated six times so that the duration of the whole sequence was 12 s. In Experiment 2, the CSs were similar to those in Experiment 1 except that they started with a random note. As a result, rats could discriminate between the stimuli when the CS started systematically with the same note. When t…
ITS1 region of the nuclear ribosomal DNA of the mycoparasite Pythium periplocum, its taxonomy, and its comparison with related species.
2000
Pythium periplocum Drechsler was isolated from some soil samples taken in the botanical garden of Tenerife, Canary Islands. This fungus has been found to be an aggressive mycoparasite of Botrytis cinerea. It is unique amongst the members of the genus Pythium because of the character combination of inflated filamentous type of sporangia and ornamented oogonia. The taxonomic description of this fungus and its comparison with related species, together with the polymerase chain reaction of the internal transcribed spacer of its nuclear ribosomal DNA, are discussed in this article.
F-type lectin from the sea bass (Dicentrarchus labrax): purification, cDNA cloning, tissue expression and localization, and opsonic activity.
2009
Recently described biochemical and structural aspects of fucose-binding lectins from the European eel (Anguilla anguilla) and striped bass (Morone saxatilis) led to the identification of a novel lectin family ("F-type" lectins) characterized by a unique sequence motif and a characteristic structural fold. The F-type fold is shared not only with other members of this lectin family, but also with apparently unrelated proteins ranging from prokaryotes to vertebrates. Here we describe the purification, biochemical and molecular properties, and the opsonic activity of an F-type lectin (DlFBL) isolated from sea bass (Dicentrarchus labrax) serum. DlFBL exhibits two tandemly arranged carbohydrate-r…
Molecular phylogeny and ultrastructure of the lichen microalga Asterochloris mediterranea sp. nov. from Mediterranean and Canary Islands ecosystems
2015
The microalgae of the genus Asterochloris are the preferential phycobionts in Cladonia, Lepraria and Stereocaulon lichens. Recent studies have highlighted the hidden diversity of the genus, even though phycobionts hosting Cladonia spp. in Mediterranean and Canarian ecosystems have been poorly explored. Phylogenetic analyses were made by concatenation of the sequences obtained with a plastid -LSU rDNA- and two nuclear -ITS rDNA and actin- molecular markers of the phycobionts living in several populations of Cladonia convoluta-C. foliacea complex, C. rangiformis and C. cervicornis species widely distributed in these areas in a great variety of substrata and habitats. A new strongly supported …
A new mycoparasite, Pythium lycopersicum, isolated in Isparta, Turkey: morphology, molecular characteristics, and its antagonism with phytopathogenic…
2008
Pythium lycopersicum sp. nov. has been isolated from soil samples taken in an agricultural land in the Isparta region of Southern Turkey. This oomycete is characterized by its contiguous sporangia having globose to elongated elements linked with hyphal filaments, ornamented oogonia, and monoclinous antheridia with large antheridial cells. The oomycete is reminiscent of Pythium ornamentatum described by the corresponding author in 1987 from soil samples taken in Algeria. Sequence analyses of the internal transcribed spacer (ITS) regions of rRNA show a close relationship with Pythium oligandrum and other mycoparasites possessing ornamented oogonia. Morphological and molecular features of this…
Involvement of an Alkane Hydroxylase System of Gordonia sp. Strain SoCg in Degradation of Solid n-Alkanes▿
2010
ABSTRACT Enzymes involved in oxidation of long-chain n -alkanes are still not well known, especially those in Gram-positive bacteria. This work describes the alkane degradation system of the n -alkane degrader actinobacterium Gordonia sp. strain SoCg, which is able to grow on n -alkanes from dodecane (C 12 ) to hexatriacontane (C 36 ) as the sole C source. SoCg harbors in its chromosome a single alk locus carrying six open reading frames (ORFs), which shows 78 to 79% identity with the alkane hydroxylase (AH)-encoding systems of other alkane-degrading actinobacteria. Quantitative reverse transcription-PCR showed that the genes encoding AlkB (alkane 1-monooxygenase), RubA3 (rubredoxin), RubA4…
Pythium contiguanum nomen novum (syn. Pythium dreschleri Paul), its antagonism to Botrytis cinerea, ITS1 region of its nuclear ribosomal DNA, and its…
2000
Pythium drechsleri Paul was described as a new species from soil samples taken in a salt-marsh of Arzew, Algeria [Paul, B. (1988) Une nouvelle espece de Pythium isolee d'une saline de l'ouest Algerien. Cryptogam. Mycol. 9, 325-333]. The name of the fungus, P. drechsleri, is a nomen invalidum, as it is a later homonym of P. drechsleri Rajgopalan and Ramakrishnan [Rajagopalan, S. and Ramakrishnan, K. (1971) Phycomycetes in agricultural soils with special reference to the Pythiaceae. Madras Univ. J. Sect. B 37,38, 100-117]. A new name, Pythium contiguanum is now being given to P. drechsleri Paul. This species is characterised by its contiguous inflated type of sporangia, smooth-walled oogonia …
Isolation of Gram-positive n-alkane degraders from a hydrocarbon-contaminated Mediterranean shoreline.
2007
Aims: To investigate the petroleum hydrocarbon (HC)-degrading potential of indigenous micro-organisms in a sandy Mediterranean coast, accidentally contaminated with petroleum-derived HCs. Methods and Results: Using culturable methods, a population of Gram-positive n-alkane degraders was detected in the contaminated soil. Five isolates, identified as one Nocardia, two Rhodococcus and two Gordonia strains, were able to degrade medium- and long-chain n-alkanes up to C36 as assessed by growth assays and gas chromatography-mass spectrometry analysis. Diverging alkane hydroxylase-encoding genes (alkB) were detected by PCR, using degenerated primers, in all the strains; multiple sequences were obt…
An idiom a day keeps the doctor away : Finnish upper secondary school English teachers' attitudes towards teaching idioms
2009
Idiomit ilmaisevat kulttuurille ominaisia ajatuksia ja siten niiden hallitseminen on tärkeä osa kielitaidon kehitystä. Viime vuosina idiomien oppimista ja opettamista onkin tutkittu melko laajasti. Tutkimuksissa on kuitenkin havaittu, että idiomien tärkeästä roolista huolimatta niiden suora opettaminen voi johtaa tilanteeseen, jossa oppilaat käyttävät niitä väärin, koska ovat erehtyneet pitämään idiomeja yleisempinä kuin ne ovat. Yksikään tutkimus ei kuitenkaan ole keskittynyt siihen, miten ja miksi opettajat käsittelevät idiomeja, minkä takia ei loppujen lopuksi tiedetä, kuinka suuri yllä kuvattu ongelma on. Tämä kandidaatin tutkielma syventyi selvittämään, mitä suomalaisen lukion englann…
To be or not to be : a case study of formulaic sequences in Finnish EFL texbooks for upper secondary school
2012
Kivettyneet ilmaisut voidaan määritellä useamman sanan pituisiksi ilmaisuiksi, jotka käyttäytyvät yksittäisten sanojen tavoin. Näillä fraaseilla on aina osasanoista riippumaton merkityksensä, ja on hyvin todennäköistä, että mieli myös varastoi kaavafraasit kokonaisuuksina yksittäisten sanojen sijasta. Kivettyneet ilmaisut ovat tärkeitä kielen sujuvalle käytölle ja oppimiselle, sekä kielelle järjestelmänä, sillä ne nopeuttavat kahta ensimmäistä prosessia ja ovat kulttuurisidonnaisuudessaan kriittisiä viimeiselle. Täten on perusteltua olettaa myös opetusmateriaalien sisältävän kaavafraaseja. Aiheitta on kuitenkin tutkittu äärimmäisen vähän, ja lähes ainoat tutkimuksen koskevat äärimmäisen raj…