Search results for " statistics"

showing 10 items of 1891 documents

A heuristic, iterative algorithm for change-point detection in abrupt change models

2017

Change-point detection in abrupt change models is a very challenging research topic in many fields of both methodological and applied Statistics. Due to strong irregularities, discontinuity and non-smootheness, likelihood based procedures are awkward; for instance, usual optimization methods do not work, and grid search algorithms represent the most used approach for estimation. In this paper a heuristic, iterative algorithm for approximate maximum likelihood estimation is introduced for change-point detection in piecewise constant regression models. The algorithm is based on iterative fitting of simple linear models, and appears to extend easily to more general frameworks, such as models i…

0301 basic medicineStatistics and ProbabilityMathematical optimizationIterative methodHeuristic (computer science)Linear model01 natural sciencesPiecewise constant model Approximate maximum likelihood Model linearization Grid search limitations010104 statistics & probability03 medical and health sciencesComputational MathematicsDiscontinuity (linguistics)030104 developmental biologyHyperparameter optimizationCovariatePiecewise0101 mathematicsStatistics Probability and UncertaintySettore SECS-S/01 - StatisticaChange detectionMathematics
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A graphical model selection tool for mixed models

2017

Model selection can be defined as the task of estimating the performance of different models in order to choose the most parsimonious one, among a potentially very large set of candidate statistical models. We propose a graphical representation to be considered as an extension to the class of mixed models of the deviance plot proposed in the literature within the framework of classical and generalized linear models. This graphical representation allows, once a reduced number of models have been selected, to identify important covariates focusing only on the fixed effects component, assuming the random part properly specified. Nevertheless, we suggest also a standalone figure representing th…

0301 basic medicineStatistics and ProbabilityMixed modelModel selectionFeature selection01 natural sciencesTask (project management)Deviance plot Penalized Weighted Residual Sum of Squares Variable selection010104 statistics & probability03 medical and health sciences030104 developmental biologyModeling and SimulationStatisticsGraphical model0101 mathematicsSelection (genetic algorithm)Mathematics
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Multiplicity- and dependency-adjusted p-values for control of the family-wise error rate

2016

Abstract Under the multiple testing framework, we propose the multiplicity- and dependency-adjustment method (MADAM) which transforms test statistics into adjusted p -values for control of the family-wise error rate. For demonstration, we apply the MADAM to data from a genetic association study.

0301 basic medicineStatistics and ProbabilityWord error rateMultiplicity (mathematics)Familywise error rateMadam01 natural sciences010104 statistics & probability03 medical and health sciences030104 developmental biologyStatisticsMultiple comparisons problemŠidák correctionPer-comparison error rate0101 mathematicsStatistics Probability and UncertaintyMathematicsStatistical hypothesis testingStatistics & Probability Letters
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Pitfalls of hypothesis tests and model selection on bootstrap samples: Causes and consequences in biometrical applications

2015

The bootstrap method has become a widely used tool applied in diverse areas where results based on asymptotic theory are scarce. It can be applied, for example, for assessing the variance of a statistic, a quantile of interest or for significance testing by resampling from the null hypothesis. Recently, some approaches have been proposed in the biometrical field where hypothesis testing or model selection is performed on a bootstrap sample as if it were the original sample. P-values computed from bootstrap samples have been used, for example, in the statistics and bioinformatics literature for ranking genes with respect to their differential expression, for estimating the variability of p-v…

0301 basic medicineStatistics and Probabilityeducation.field_of_studyComputer scienceModel selectionBootstrap aggregatingPopulationGeneral MedicineAsymptotic theory (statistics)01 natural sciences010104 statistics & probability03 medical and health sciences030104 developmental biologyResamplingStatisticsEconometrics0101 mathematicsStatistics Probability and UncertaintyeducationNull hypothesisQuantileStatistical hypothesis testingBiometrical Journal
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Collective Cell Migration in a Fibrous Environment: A Hybrid Multiscale Modelling Approach

2021

International audience; The specific structure of the extracellular matrix (ECM), and in particular the density and orientation of collagen fibres, plays an important role in the evolution of solid cancers. While many experimental studies discussed the role of ECM in individual and collective cell migration, there are still unanswered questions about the impact of nonlocal cell sensing of other cells on the overall shape of tumour aggregation and its migration type. There are also unanswered questions about the migration and spread of tumour that arises at the boundary between different tissues with different collagen fibre orientations. To address these questions, in this study we develop …

0301 basic medicineStatistics and Probabilitymulti-scale hybrid mathematical modelMaterials sciencecell migration[SDV.CAN]Life Sciences [q-bio]/Cancercontinuous cell-extracellular matrix interactionsQA273-280Articlenumerical simulationsExtracellular matrix03 medical and health sciences0302 clinical medicineCollagen fibres[SDV.BC.IC]Life Sciences [q-bio]/Cellular Biology/Cell Behavior [q-bio.CB][NLIN]Nonlinear Sciences [physics][MATH]Mathematics [math]T57-57.97Applied mathematics. Quantitative methodsApplied MathematicsCollective cell migrationCell migrationTumour invasionCollagen fibre030104 developmental biologyorientation of extracellular matrix fibresagent based discrete cell-cell interactionsContinuous fieldBiological systemProbabilities. Mathematical statistics030217 neurology & neurosurgeryFrontiers in Applied Mathematics and Statistics
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Kinematic Sub-Populations in Bull Spermatozoa: A Comparison of Classical and Bayesian Approaches

2020

The ejaculate is heterogenous and sperm sub-populations with different kinematic patterns can be identified in various species. Nevertheless, although these sub-populations are statistically well defined, the statistical differences are not always relevant. The aim of the present study was to characterize kinematic sub-populations in sperm from two bovine species, and diluted with different commercial extenders, and to determine the statistical relevance of sub-populations through Bayesian analysis. Semen from 10 bulls was evaluated after thawing. An ISAS&reg

0301 basic medicineendocrine systemMultivariate statisticsKinematicsCASABayesian probabilitySemenKinematicsBiologyArticleGeneral Biochemistry Genetics and Molecular Biologylaw.invention03 medical and health sciences0302 clinical medicinelawStatisticsbulllcsh:QH301-705.5030219 obstetrics & reproductive medicineGeneral Immunology and MicrobiologySub populationsurogenital systemExtenderMotilitySpermSpermatozoaBulls030104 developmental biologylcsh:Biology (General)ClusterPrincipal component analysisGeneral Agricultural and Biological Sciences
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Concise update on colorectal cancer epidemiology

2020

Colorectal cancer is a type of gastrointestinal malignancy originating from either the colon or rectum. In this short report we provide a concise update on recent colorectal cancer statistics, especially concerning frequency, mortality, life expectancy and risk factors. Overall, colorectal cancer is the third more frequent malignant disease around the world (1.85 million of new cases/years; 10.2% of total malignancies), with 2.27% cumulative risk of onset between 0–74 years. The age-standardized rate increases by over 10-fold before the age of 50 up to ≥85 years, whilst men have ~50% enhanced risk compared to women (the 0–74 years risk is 2.75% in men and 1.83% in women, respectively). Alth…

0301 basic medicinemedicine.medical_specialtyColorectal cancerRectumDistant CancerReview ArticleOverweight03 medical and health sciences0302 clinical medicineInternal medicineEpidemiologymedicineIn patientbusiness.industryDietary fibreColorectal cancer; epidemiology; frequency; mortality; statisticsGeneral Medicinemedicine.diseaseColorectal cancermortality030104 developmental biologymedicine.anatomical_structurestatisticsfrequency030220 oncology & carcinogenesisLife expectancyepidemiologymedicine.symptombusinessAnnals of Translational Medicine
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Pathways of care for HIV infected children in Beira, Mozambique: pre-post intervention study to assess impact of task shifting

2018

Abstract Background In 2013, Mozambique implemented task-shifting (TS) from clinical officers to maternal and child nurses to improve care for HIV positive children < 5 years old. A retrospective, pre-post intervention study was designed to evaluate effectiveness of a new pathway of care in a sample of Beira District Local Health Facilities (LHFs), the primary, local, community healthcare services. Methods The study was conducted by accessing registries of At Risk Children Clinics (ARCCs) and HIV Health Services. Two time periods, pre- and post-intervention, were compared using a set of endpoints. Variables distribution was explored using descriptive statistics. T-student, Mann Whitney and …

0301 basic medicinemedicine.medical_specialtyReferralHIV InfectionsHIV infected childrenSettore MED/42 - Igiene Generale E ApplicataPost-intervention03 medical and health sciences0302 clinical medicineHIV exposed infants; HIV infected children; Human immunodeficiency virus; Paediatric HIV care and treatment; Pathways of care; Task-shiftingIntervention (counseling)EpidemiologyHealth caremedicineHumansHealth Workforce030212 general & internal medicineHuman immunodeficiency viruReferral and ConsultationMozambiqueRetrospective StudiesDescriptive statisticsbusiness.industryHuman immunodeficiency virusPublic healthlcsh:Public aspects of medicinePaediatric HIV care and treatmentPublic Health Environmental and Occupational HealthInfantHIV exposed infantlcsh:RA1-1270030112 virologyTask-shiftingHIV exposed infantsCD4 Lymphocyte CountChild PreschoolFamily medicineHealth Services ResearchBiostatisticsbusinessDelivery of Health CarePathways of careResearch ArticleBMC Public Health
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When age means safety: Data to assess trends and differences on rule knowledge, risk perception, aberrant and positive road behaviors, and traffic cr…

2019

This data article examines the association between age, knowledge of traffic rules, risk perception, risky and positive behaviors on the road and traffic safety outcomes of cyclists. The data was collected using a structured self-administrable and online-based questionnaire, applied to a full sample of 1064 cyclists. The data contains 4 parts: descriptive statistics; graphical trends for each study variable according to age; Post-Hoc (Tukey-HSD) comparisons between cyclists classified in the different age groups; and, finally, the dataset for further explorations in this regard. For further information, it is convenient to read the full article entitled "Explaining Self-Reported Traffic Cra…

0303 health sciencesMultidisciplinaryDescriptive statisticsApplied psychologyHuman factors and ergonomicsPoison controllcsh:Computer applications to medicine. Medical informaticsSuicide preventionOccupational safety and healthRisk perception03 medical and health sciences0302 clinical medicineEmpirical researchInjury preventionlcsh:R858-859.7PsychologyPsychologylcsh:Science (General)030217 neurology & neurosurgery030304 developmental biologylcsh:Q1-390Data in brief
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Comparison of odour sensory profiles performed by two independent trained panels following the same descriptive analysis procedures

2000

Odour sensory profiling of 28 associations of cheese ripening micro-organisms was performed by two panels of 10 assessors on two different sites. Sample preparation, training protocols and references, tasting procedures and scoring were similar in the two laboratories. Panel 2 used 10 attributes and panel 1 used these terms plus 4 extra descriptors. Analysis of variance and multivariate methods (canonical variate analysis, generalised procrustes analysis and STATIS) exhibited differences between assessors within a panel and between panels concerning the use of the scoring scale and the strength of product discrimination by attribute. Panel 1 was more sensitive to fruity notes and panel 2 to…

0303 health sciencesMultivariate statisticsNutrition and DieteticsDescriptive statistics030309 nutrition & dieteticsSensory system04 agricultural and veterinary sciences[SDV.IDA] Life Sciences [q-bio]/Food engineering040401 food scienceSensory analysisGeneralised procrustes analysis03 medical and health sciences0404 agricultural biotechnologyCanonical variate analysisStatistics[SDV.IDA]Life Sciences [q-bio]/Food engineeringEconometricsWine tastingAnalysis of varianceComputingMilieux_MISCELLANEOUSFood ScienceMathematics
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