Search results for "10.03"
showing 10 items of 4606 documents
Parental Care and Investment
2017
Parental care is common throughout the animal kingdom, and much variation exists among species in how, and how much, parents care for their offspring. In most species, females care more; in others, males care more and in some, caring is more or less equally shared between the sexes. Several hypotheses have been proposed to explain patterns of parental care within and among species. These hypotheses invoke factors such as the relatedness (parentage certainty) of each parent to the brood; the sex ratio at maturation; the strength of sexual selection faced by each sex and the exact nature of any trade-offs between caring and other activities. Work is still ongoing to develop an overarching hyp…
The Legal International Wildlife Trade Favours Invasive Species Establishment: The Monk and Ring-Necked Parakeets in Spain
2018
The international wildlife trade is a lucrative business. Although a huge variety of animal groups are trafficked, the Psittaciformes (parrots) are amongst the most traded avian groups. Deliberate or accidental releases of imported parrots have led to the establishment of feral populations in many countries. Far from their native habitats, parrots may cause economic and ecological damage, and may even favour the transmission of zoonotic diseases. Despite this, the links between numbers of imported individuals and the establishment of non-native populations is not well known. In this study, we analysed data on imports of two well-known invasive parrots, the Monk Parakeet Myiopsitamonachus an…
Climate Change Genomics Calls for Standardized Data Reporting
2020
The advent of new and affordable high-throughput sequencing techniques allows for the investigation of the genetic basis of environmental adaptation throughout the plant and animal kingdom. The framework of genotype-environment associations (GEA) provides a powerful link by correlating the geographic distribution of genotype patterns of individuals or populations with environmental factors on a spatial scale. We coarsely review the short history of GEA studies, summarizing available studies, organisms, data type, and data availability for these studies. GEA is a powerful tool in climate change research and we therefore focus on climate variables as environmental factors. While our initial a…
Genetic Basis of Body Color and Spotting Pattern in Redheaded Pine Sawfly Larvae (Neodiprion lecontei)
2018
Abstract Pigmentation has emerged as a premier model for understanding the genetic basis of phenotypic evolution, and a growing catalog of color loci is starting to reveal biases in the mutations, genes, and genetic architectures underlying color variation in the wild. However, existing studies have sampled a limited subset of taxa, color traits, and developmental stages. To expand the existing sample of color loci, we performed QTL mapping analyses on two types of larval pigmentation traits that vary among populations of the redheaded pine sawfly (Neodiprion lecontei): carotenoid-based yellow body color and melanin-based spotting pattern. For both traits, our QTL models explained a substan…
Nest-mediated parental care in a marine fish: Are large-scale nesting habitats selected and do these habitats respond to small-scale requirements?
2018
Fishes have evolved various reproductive strategies including mechanisms that involve parental care and demersal eggs laid into nests. Symphodus ocellatus has a seasonal reproduction period during which large, dominant males become territorial and build nests with fragments of algae, where they attract females to spawn and provide care to the developing eggs. Based on the hypothesis that the S. ocellatus males choose the reproductive habitat based on some characteristics of the substrate, here we assessed whether, on a coastal area scale, the distribution of this species changes during the reproductive period because of the selection of some suitable sites or substrates, and whether the nes…
Nonmodal scutes patterns in the Loggerhead Sea Turtle (Caretta caretta): a possible epigenetic effect?
2016
Eleven specimens of the threatened Loggerhead Sea Turtle (Caretta caretta (L., 1758)) were caught accidentally by fishermen in different parts of Sicily (Mediterranean Sea). Five of them showed an atypical number of carapacial and plastron scutes, making the immediate identification of the specimens as C. caretta difficult. Both genetic and epigenetic analysis were carried out on these specimens. Sequencing of a 649 bp sequence of the mitochondrial cytochrome c oxidase I (COI) gene allowed us to classify all the individuals as C. caretta. Epigenetic analysis, performed by evaluating the total level of DNA cytosine methylation, showed a reduced and significant (F = 72.65, p < 0.01) globa…
Carex sect. Rhynchocystis (Cyperaceae): a Miocene subtropical relict in the Western Palaearctic showing a dispersal‐derived Rand Flora pattern
2017
Aim To evaluate how Cenozoic climate changes shaped the evolution and distribution of Carex section Rhynchocystis. Location Western Palaearctic and Afrotropical regions (Rand Flora pattern). Methods DNA regions ITS, ETS (nuclear), matK and rpl32-trnLUAG (plastid) were amplified for 86 samples of species from section Rhynchocystis. Phylogenetic and phylogeographical relationships were inferred using maximum parsimony, Bayesian inference and coalescent-based species tree approaches. Divergence times and ancestral areas were also inferred. Results Carex section Rhynchocystis is a clade that diversified during the middle Miocene in Europe. Most cladogenesis events date to the middle and late Mi…
Chloroplast genomes of Rubiaceae: Comparative genomics and molecular phylogeny in subfamily Ixoroideae.
2020
In Rubiaceae phylogenetics, the number of markers often proved a limitation with authors failing to provide well-supported trees at tribal and generic levels. A robust phylogeny is a prerequisite to study the evolutionary patterns of traits at different taxonomic levels. Advances in next-generation sequencing technologies have revolutionized biology by providing, at reduced cost, huge amounts of data for an increased number of species. Due to their highly conserved structure, generally recombination-free, and mostly uniparental inheritance, chloroplast DNA sequences have long been used as choice markers for plant phylogeny reconstruction. The main objectives of this study are: 1) to gain in…
Evaluation of chloroplast genome annotation tools and application to analysis of the evolution of coffee species.
2018
International audience; Chloroplast sequences are widely used for phylogenetic analysis due to their high degree of conservation in plants. Whole chloroplast genomes can now be readily obtained for plant species using new sequencing methods, giving invaluable data for plant evolution However new annotation methods are required for the efficient analysis of this data to deliver high quality phylogenetic analyses. In this study, the two main tools for chloroplast genome annotation were compared. More consistent detection and annotation of genes were produced with GeSeq when compared to the currently used Dogma. This suggests that the annotation of most of the previously annotated chloroplast …
The problem of misidentification between edible and poisonous wild plants: Reports from the Mediterranean area
2018
Abstract Today, in many European countries, people are looking for wild edible plants to experience new tastes and flavors, by following the new trend of being green and environmentally friendly. Young borage and spinach leaves can be easily confused by inexpert pickers with those of other plants, including poisonous ones, such as Mandragora autumnalis Bertol. (mandrake) or Digitalis purpurea L. (foxglove), common in southern and northern Italy respectively. In the last twenty years, several cases of intoxication by accidental ingestion of mandrake and foxglove have been reported. The purpose of this work was to perform a pharmacognostic characterization of young leaves from borage, mandrak…