Search results for "17"
showing 10 items of 14048 documents
Fishery-dependent and -independent data lead to consistent estimations of essential habitats
2016
AbstractSpecies mapping is an essential tool for conservation programmes as it provides clear pictures of the distribution of marine resources. However, in fishery ecology, the amount of objective scientific information is limited and data may not always be directly comparable. Information about the distribution of marine species can be derived from two main sources: fishery-independent data (scientific surveys at sea) and fishery-dependent data (collection and sampling by observers in commercial vessels). The aim of this paper is to compare whether these two different sources produce similar, complementary, or different results. We compare them in the specific context of identifying the Es…
Modelling sensitive elasmobranchs habitat
2013
Basic information on the distribution and habitat preferences of ecologically important species is essential for their management and protection. In the Mediterranean Sea there is increasing concern over elasmobranch species because their biological (ecological) characteristics make them highly vulnerable to fishing pressure. Their removal could affect the structure and function of marine ecosystems, inducing changes in trophic interactions at the community level due to the selective elimination of predators or prey species, competitors and species replacement. In this study Bayesian hierarchical spatial models are used to map the sensitive habitats of the three most caught elasmobranch spe…
Modelling landscape constraints on farmland bird species range shifts under climate change
2018
Several studies estimating the effects of global environmental change on biodiversity are focused on climate change. Yet, non-climatic factors such as changes in land cover can also be of paramount importance. This may be particularly important for habitat specialists associated with human-dominated landscapes, where land cover and climate changes may be largely decoupled. Here, we tested this idea by modelling the influence of climate, landscape composition and pattern, on the predicted future (2021–2050) distributions of 21 farmland bird species in the Iberian Peninsula, using boosted regression trees and 10-km resolution presence/absence data. We also evaluated whether habitat specialist…
Acoustic communication in crocodilians: from behaviour to brain.
2009
Crocodilians and birds are the modern representatives of Phylum Archosauria. Although there have been recent advances in our understanding of the phylogeny and ecology of ancient archosaurs like dinosaurs, it still remains a challenge to obtain reliable information about their behaviour. The comparative study of birds and crocodiles represents one approach to this interesting problem. One of their shared behavioural features is the use of acoustic communication, especially in the context of parental care. Although considerable data are available for birds, information concerning crocodilians is limited. The aim of this review is to summarize current knowledge about acoustic communication in…
Oxygen and carbon isoscapes for the Baltic Sea : Testing their applicability in fish migration studies
2017
Conventional tags applied to individuals have been used to investigate animal movement, but these methods require tagged individuals be recaptured. Maps of regional isotopic variability known as “isoscapes” offer potential for various applications in migration research without tagging wherein isotope values of tissues are compared to environmental isotope values. In this study, we present the spatial variability in oxygen (δ18OH2O) and dissolved inorganic carbon (δ13CDIC) isotope values of Baltic Sea water. We also provide an example of how these isoscapes can reveal locations of individual animal via spatial probability surface maps, using the high-resolution salmon otolith isotope data fr…
Effect of peracetic acid on levels of geosmin, 2-methylisoborneol, and their potential producers in a recirculating aquaculture system for rearing ra…
2019
Abstract In recirculating aquaculture systems (RAS)s, off-flavors and odors, mainly caused by geosmin (GSM) and 2-methylisoborneol (MIB), can accumulate in the flesh of fish from RAS water, reducing the profitability of production. In this study, peracetic acid (PAA) was applied in three application intervals to pump sumps of rainbow trout (Oncorhynchus mykiss) reared in RAS. Using a real-time polymerase chain reaction (qPCR), the potential off-flavor producers were quantified using geoA and MIB synthase genes. Streptomyces was identified as the major GSM producer, and biofilters showed the highest number of potential off-flavor producers. Concentrations of GSM and MIB were analyzed in the …
Food-web structure and mercury dynamics in a large subarctic lake following multiple species introductions
2016
Summary The rate of non-native fish introductions into freshwater ecosystems has more than doubled during the past three decades, posing a serious threat to native biodiversity. Despite potential benefits for fisheries, little is known about how introduced species interact with native communities at the food-web level, or impact energy transfer dynamics and accumulation of contaminants in lake ecosystems. Here, we explored the trophic structure of a large, oligotrophic subarctic lake and assessed the trophic niche use and potential ecosystem-wide consequences of two introduced salmonid species: piscivorous lake trout (Salvelinus namaycush) and zooplanktivorous vendace (Coregonus albula). We…
Chironomid incorporation of methane-derived carbon in plankton- and macrophyte-dominated habitats in a large shallow lake
2018
1. While 13 C-depleted carbon derived from biogenic methane can substantially contribute to the benthic secondary production in deep stratified lakes, its role in shallow lakes is less clear. We investigated the dynamics of δ13 C and δ15 N in the larvae of Chironomus plumosus throughout an annual cycle in two ecologically distinct basins (open-water plankton-dominated and sheltered macrophyte- covered) of a large (270 km2 ), shallow, polymictic and eutrophic lake (Võrtsjärv, Estonia, North Europe). The larval stable isotopic compositions were linked to the presence of methane-oxidising bacteria (MOB) in larval guts and sediments. 2. Molecular detection of MOB revealed their presence in vari…
The evolution, diversity and host associations of rhabdoviruses
2015
Metagenomic studies are leading to the discovery of a hidden diversity of RNA viruses, but new approaches are needed predict the host species these poorly characterised viruses pose a risk to. The rhabdoviruses are a diverse family of RNA viruses that includes important pathogens of humans, animals and plants. We have discovered the sequences of 32 new rhabdoviruses through a combination of our own RNA sequencing of insects and searching public sequence databases. Combining these with previously known sequences we reconstructed the phylogeny of 195 rhabdovirus sequences producing the most in depth analysis of the family to date. In most cases we know nothing about the biology of the viruses…
Lake zooplankton delta13C values are strongly correlated with the delta13C values of distinct phytoplankton taxa
2016
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