Search results for "6C"
showing 10 items of 16 documents
Cytological and molecular characterization of three gametoclones of Citrus clementina
2013
Abstract Background Three gametoclonal plants of Citrus clementina Hort. ex Tan., cv. Nules, designated ESP, FRA, and ITA (derived from three labs in Spain, France, and Italy, respectively), were selected for cytological and molecular characterization in order to elucidate genomic rearrangements provoked by haploidization. The study included comparisons of their ploidy, homozygosity, genome integrity, and gene dosage, using chromosome counting, flow cytometry, SSR marker genotyping, and array-Comparative Genomic Hybridization (array-CGH). Results Chromosome counting and flow cytometry revealed that ESP and FRA were haploid, but ITA was tri-haploid. Homozygous patterns, represented by a sing…
ER+ Breast Cancers Resistant to Prolonged Neoadjuvant Letrozole Exhibit an E2F4 Transcriptional Program Sensitive to CDK4/6 Inhibitors
2018
AbstractPurpose: This study aimed to identify biomarkers of resistance to endocrine therapy in estrogen receptor–positive (ER+) breast cancers treated with prolonged neoadjuvant letrozole.Experimental Design: We performed targeted DNA and RNA sequencing in 68 ER+ breast cancers from patients treated with preoperative letrozole (median, 7 months).Results: Twenty-four tumors (35%) exhibited a PEPI score ≥4 and/or recurred after a median of 58 months and were considered endocrine resistant. Integration of the 47 most upregulated genes (log FC > 1, FDR < 0.03) in letrozole-resistant tumors with transcription-binding data showed significant overlap with 20 E2F4-regulated genes (P =…
Long Non-coding Antisense RNA TNRC6C-AS1 Is Activated in Papillary Thyroid Cancer and Promotes Cancer Progression by Suppressing TNRC6C Expression
2018
Context: Evidences have shown the important role of long non-coding antisense RNAs in regulating its cognate sense gene in cancer biology. Objective: Investigate the regulatory role of a long non-coding antisense RNA TNRC6C-AS1 on its sense partner TNRC6C, and their effects on the aggressiveness and iodine-uptake ability of papillary thyroid cancer (PTC). Design: TNRC6C-AS1 was identified as the target long non-coding RNA in PTC by using microarray analysis and computational analysis. In vitro gain/loss-of-function experiments were performed to investigate the effects of TNRC6C-AS1 and TNRC6C on proliferation, apoptosis, migration, invasion and iodine-uptake ability of TPC1 cells. Expressio…
Frame-related Sequences in Chains and Scales of Hilbert Spaces
2022
Frames for Hilbert spaces are interesting for mathematicians but also important for applications in, e.g., signal analysis and physics. In both mathematics and physics, it is natural to consider a full scale of spaces, and not only a single one. In this paper, we study how certain frame-related properties of a certain sequence in one of the spaces, such as completeness or the property of being a (semi-) frame, propagate to the other ones in a scale of Hilbert spaces. We link that to the properties of the respective frame-related operators, such as analysis or synthesis. We start with a detailed survey of the theory of Hilbert chains. Using a canonical isomorphism, the properties of frame se…
7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs.
2019
Abstract Background Knowledge of the three-dimensional structure of the genome is necessary to understand how gene expression is regulated. Recent experimental techniques such as Hi-C or ChIA-PET measure long-range chromatin interactions genome-wide but are experimentally elaborate, have limited resolution and such data is only available for a limited number of cell types and tissues. Results While ChIP-seq was not designed to detect chromatin interactions, the formaldehyde treatment in the ChIP-seq protocol cross-links proteins with each other and with DNA. Consequently, also regions that are not directly bound by the targeted TF but interact with the binding site via chromatin looping are…
Evaluation of humoral and cellular response to four vaccines against COVID-19 in different age groups: A longitudinal study
2022
To date there has been limited head-to-head evaluation of immune responses to different types of COVID-19 vaccines. A real-world population-based longitudinal study was designed with the aim to define the magnitude and duration of immunity induced by each of four different COVID-19 vaccines available in Italy at the time of this study. Overall, 2497 individuals were enrolled at time of their first vaccination (T0). Vaccine-specific antibody responses induced over time by Comirnaty, Spikevax, Vaxzevria, Janssen Ad26.COV2.S and heterologous vaccination were compared up to six months after immunization. On a subset of Comirnaty vaccinees, serology data were correlated with the ability to neutr…
On the generation and degradation of emerged coral reef terrace sequences: First cosmogenic 36Cl analysis at Cape Laundi, Sumba Island (Indonesia)
2021
(IF 4.45: Q1); International audience; The emerged coral reef terrace sequence at Cape Laundi, on the north coast of Sumba Island (Indonesia), with at least 18 successive strandlines, remains poorly dated in spite of numerous previous data. The age discrepancies within these coral reef terraces (CRTs) were previously explained by their polycyclic nature, triggered by marine erosion and reoccupation of old coral colonies by new ones. This study aims at highlighting these processes, as well as the continental denudation that participates in the partial stripping of the thin superficial coral reef layer overlying the pre-existing surface, exhuming older coral colonies. For this purpose, we use…
Reproducing pairs of measurable functions and partial inner product spaces
2016
We continue the analysis of reproducing pairs of weakly measurable functions, which generalize continuous frames. More precisely, we examine the case where the defining measurable functions take their values in a partial inner product space (PIP spaces). Several examples, both discrete and continuous, are presented.
Probing the limit of nuclear existence: Proton emission from 159Re
2006
WOS: 000240847400007
Operators on Partial Inner Product Spaces: Towards a Spectral Analysis
2014
Given a LHS (Lattice of Hilbert spaces) $V_J$ and a symmetric operator $A$ in $V_J$, in the sense of partial inner product spaces, we define a generalized resolvent for $A$ and study the corresponding spectral properties. In particular, we examine, with help of the KLMN theorem, the question of generalized eigenvalues associated to points of the continuous (Hilbertian) spectrum. We give some examples, including so-called frame multipliers.