Search results for "70"
showing 10 items of 9933 documents
Diversity and endemism of woody plant species in the Equatorial Pacific seasonally dry forests
2009
The biodiversity hotspot of the Equatorial Pacific region in western Ecuador and northwestern Peru comprises the most extensive seasonally dry forest formations west of the Andes. Based on a recently assembled checklist of the woody plants occurring in this region, we analysed their geographical and altitudinal distribution patterns. The montane seasonally dry forest region (at an altitude between 1,000 and 1,100 m, and the smallest in terms of area) was outstanding in terms of total species richness and number of endemics. The extensive seasonally dry forest formations in the Ecuadorean and Peruvian lowlands and hills (i.e., forests below 500 m altitude) were comparatively much more specie…
Deficiency in the Phosphorylated Pathway of Serine Biosynthesis Perturbs Sulfur Assimilation.
2018
Although the plant Phosphorylated Pathway of l-Ser Biosynthesis (PPSB) is essential for embryo and pollen development, and for root growth, its metabolic implications have not been fully investigated. A transcriptomics analysis of Arabidopsis (Arabidopsis thaliana) PPSB-deficient mutants at night, when PPSB activity is thought to be more important, suggested interaction with the sulfate assimilation process. Because sulfate assimilation occurs mainly in the light, we also investigated it in PPSB-deficient lines in the day. Key genes in the sulfate starvation response, such as the adenosine 5′phosphosulfate reductase genes, along with sulfate transporters, especially those involved in sulfat…
How challenging RADseq data turned out to favor coalescent-based species tree inference. A case study in Aichryson (Crassulaceae)
2022
Analysing multiple genomic regions while incorporating detection and qualification of discordance among regions has become standard for understanding phylogenetic relationships. In plants, which usually have comparatively large genomes, this is feasible by the combination of reduced-representation library (RRL) methods and high-throughput sequencing enabling the cost effective acquisition of genomic data for thousands of loci from hundreds of samples. One popular RRL method is RADseq. A major disadvantage of established RADseq approaches is the rather short fragment and sequencing range, leading to loci of little individual phylogenetic information. This issue hampers the application of coa…
Evolution of the Globin Gene Family in Deuterostomes: Lineage-Specific Patterns of Diversification and Attrition
2012
In the Metazoa, globin proteins display an underlying unity in tertiary structure that belies an extraordinary diversity in primary structures, biochemical properties, and physiological functions. Phylogenetic reconstructions can reveal which of these functions represent novel, lineage-specific innovations, and which represent ancestral functions that are shared with homologous globin proteins in other eukaryotes and even prokaryotes. To date, our understanding of globin diversity in deuterostomes has been hindered by a dearth of genomic sequence data from the Ambulacraria (echinoderms + hemichordates), the sister group of chordates, and the phylum Xenacoelomorpha, which includes xenoturbel…
Comparison of Diatoms and Dinoflagellates from Different Habitats as Sources of PUFAs
2019
Recent studies have clearly shown the importance of omega-3 (&omega
Dental microwear texture gradients in guinea pigs reveal that material properties of the diet affect chewing behaviour
2021
ABSTRACT Dental microwear texture analysis (DMTA) is widely used for diet inferences in extant and extinct vertebrates. Often, a reference tooth position is analysed in extant specimens, while isolated teeth are lumped together in fossil datasets. It is therefore important to test whether dental microwear texture (DMT) is tooth position specific and, if so, what causes the differences in wear. Here, we present results from controlled feeding experiments with 72 guinea pigs, which received either fresh or dried natural plant diets of different phytolith content (lucerne, grass, bamboo) or pelleted diets with and without mineral abrasives (frequently encountered by herbivorous mammals in natu…
Comparison of different methods to assess the distribution of alien plants along the road network and use of Google Street View panoramas interpretat…
2021
The survey by foot in the field is compared to the survey from a car, the photo-interpretation of Google Street View (GSV) panoramas continuously and at intervals of 1.5 km and the photo-interpretation of Google Earth aerial images on a 10 km stretch of road in Sicily. The survey by foot was used as reference for the other methods. The interpretation of continuous GSV panoramas gave similar results as the assessment by car in terms of the number of species identified and their location, but with lower cost. The interpretation online of aerial photos allowed the identification of a limited number of taxa, but gave a good localisation for them. Interpretation of GSV panoramas, each of 1.5 km,…
Complete nucleotide sequence of the mitochondrial genome of a salamander, Mertensiella luschani
2003
The complete nucleotide sequence (16,650 bp) of the mitochondrial genome of the salamander Mertensiella luschani (Caudata, Amphibia) was determined. This molecule conforms to the consensus vertebrate mitochondrial gene order. However, it is characterized by a long non-coding intervening sequence with two 124-bp repeats between the tRNA Thr and tRNA Pro genes. The new sequence data were used to reconstruct a phylogeny of jawed vertebrates. Phylogenetic analyses of all mitochondrial protein-coding genes at the amino acid level recovered a robust vertebrate tree in which lungfishes are the closest living relatives of tetrapods, salamanders and frogs are grouped together to the exclusion of cae…
Standardised spider (Arachnida, Araneae) inventory of Kilpisjarvi, Finland
2020
Abstract Background A spider taxonomy and ecology field course was organised in Kilpisjarvi Biological Station, northern Finland, in July 2019. During the course, four 50 × 50 m plots in mountain birch forest habitat were sampled following a standardised protocol. In addition to teaching and learning about spider identification, behaviour, ecology and sampling, the main aim of the course was to collect comparable data from the Kilpisjarvi area as part of a global project, with the purpose of uncovering global spider diversity patterns. New information A total of 2613 spiders were collected, of which 892 (34%) were adults. Due to uncertainty of juvenile identification, only adults are includ…
Social process of adaptation to environmental changes: How eastern african societies intervene between crops and climate
2014
Abstract Studies on climate change can only be conducted on a long time scale, and observing how societies adapt their sowing practices to climate variability is challenging and costly. As an alternative, a space and time substitution design was used, changes in space corresponding to that induced in time by environmental change. On the eastern slope of Mount Kenya, the Tharaka community, originating from the lowlands (750 m), moved up to the midlands (950 m) with their lowland-adapted resources, whereas the Mwimbi, originating from wetter upland (1100 m), moved down to the midlands with their highland-adapted genetic resources. A weather station was installed at 950 and 1100 m, and a logis…