Search results for "8S"

showing 10 items of 109 documents

Phylogenetic position of two Macrobiotus species with a revisional note on Macrobiotus sottilei Pilato, Kiosya, Lisi & Sabella, 2012 (Tardigr…

2021

In a moss and lichen sample collected on the Polish coast, a new population of Macrobiotus sottilei was found. Given that the original description of M. sottilei was based solely on the morphology observed under light microscopy and measurements of a few individuals, we provide, by means of integrative taxonomy, a revisional note on this species. We present a comprehensive set of morphometric and morphological data from light and scanning electron microscopy analysis together with nucleotide sequences of three nuclear (18S rRNA, 28S rRNA, ITS-2) and one mitochondrial (COI) DNA fragments. We also provide the same set of DNA sequences for Macrobiotus glebkai from a population recently found i…

MacrobiotidaePopulationTardigradaZoologyMacrobiotus hufelandi morphogroupBiology18S ribosomal RNA28S ribosomal RNARNA Ribosomal 28STardigradaAnimalsAnimaliaLicheneducationintegrative taxonomyPhylogenyEcology Evolution Behavior and SystematicsTaxonomyeducation.field_of_studycuticular barsPhylogenetic treeMacrobiotus glebkaiBiodiversityEuropeTaxonEutardigradaParachelaAnimal Science and ZoologyTaxonomy (biology)Zootaxa
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The importance of integrative approaches in nematode taxonomy: the validity of Parapharyngodon and Thelandros as distinct genera

2018

AbstractDespite the advances of molecular tools, new nematode species are still described mainly based on morphological characters. Parapharyngodon and Thelandros are two genera of oxyurids with unclear related taxonomic histories. Here we use morphological characters (linear measurements and categorical variables) and genetic information (18S rRNA, 28S rRNA and COI partial gene sequences) to confirm the relationships between representatives of these two genera and to determine whether they can be discriminated morphologically. Genetic results confirm the existence of two main clades, mostly congruent with Parapharyngodon and Thelandros genera but with several discordances. Thelandros is po…

Male030231 tropical medicineBiology18S ribosomal RNA030308 mycology & parasitologyAlae03 medical and health sciences0302 clinical medicineOxyuroidea28S ribosomal RNAPolyphylyRNA Ribosomal 28SRNA Ribosomal 18SAnimalsCladeMexicoPhylogenyOxyuriasis0303 health sciencesLizardsSequence Analysis DNAGeneral MedicineDNA Helminthbiology.organism_classificationNematodeEvolutionary biologyMorphological analysisFemaleAnimal Science and ZoologyParasitologyTaxonomy (biology)Journal of Helminthology
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Cardicola aurata sp. n. (Digenea: Sanguinicolidae) from Mediterranean Sparus aurata L. (Teleostei: Sparidae) and its unexpected phylogenetic relation…

2008

A new sanguinicolid trematode, Cardicola aurata sp. n., is described from gilthead seabream Sparus aurata L., from off the Spanish Mediterranean coast. The morphology of C. aurata sp. n. generally agrees with the diagnosis of the genus, however, in contrast to all other reported Cardicola spp. the male pore is located sub-medially at the posterior end of the body instead of sinistrally before the posterior end of the body. Based on a comparison of the morphology as well as partial 28S and ITS2 rDNA sequence data from the present species with that from closely related species, it was decided to emend the diagnosis of Cardicola rather than create a new genus, as the aberrant position of the m…

MaleAutapomorphySparidaeBrayaZoologyTrematode InfectionsDigeneaFish DiseasesSpecies SpecificityGenusDNA Ribosomal SpacerRNA Ribosomal 28SMediterranean SeaAnimalsPhylogenyTeleosteibiologyPhylogenetic treeAnatomyDNA Helminthbiology.organism_classificationSea BreamInfectious DiseasesLiverMolecular phylogeneticsParasitologyFemaleTrematoda
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Chromosomal Localization of 18S-28S rDNA and (TTAGGG)n Sequences in Two South African Dormice of the Genus Graphiurus (Rodentia: Gliridae).

2019

Classical cytogenetics and mapping of 18S-28S rDNA and (TTAGGG)<>n sequences by fluorescence in situ hybridization (FISH) was performed on Graphiurus platyops (GPL) and Graphiurus ocularis (GOC) metaphases with the aim to characterize the genomes. In both species, inverted DAPI karyotypes showed the same diploid number, 2n = 46, and hybridization of the (TTAGGG)<>n probe revealed interstitial telomeric sequences (ITSs) at the centromeres of almost all bi-armed chromosomes. FISH with the rDNA probe localized nucleolus organizer regions (NORs), at the terminal ends of the p arms of the telocentric pairs 16 and 17 in both species and detected additional signals on GPL8 and GOC18, 1…

MaleBase SequenceRepetitive sequence amplificationChromosomal evolutionKaryotypeSettore BIO/08 - AntropologiaChromosomes MammalianDNA RibosomalMyoxidaeChromosome BandingSouth AfricaGraphiurus platyopRNA Ribosomal 28SRNA Ribosomal 18SAnimalsFusionIn Situ Hybridization FluorescenceGraphiurus oculariCytogenetic and genome research
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Morphology, ultrastructure and molecular characterisation of Spiroxys japonica Morishita, 1926 (Spirurida: Gnathostomatidae) from Pelophylax nigromac…

2014

Gnathostomatid nematodes identified morphologically as Spiroxys japonica Morishita, 1926 were collected from the dark-spotted frog Pelophylax nigromaculatus (Hallowell) (Amphibia: Ranidae) in China. Light and scanning electron microscopy were used to study the morphology of this species in detail. Previously unreported morphological features are revealed and others corrected. In addition, adult nematodes of S. japonica collected from P. nigromaculatus and Spiroxys hanzaki Hasegawa, Miyata & Doi, 1998 collected from Andrias japonicus (Temminck) (Caudata: Cryptobranchidae) in China and Japan, respectively, and the third-stage larva of S. japonica collected from Lithobates catesbeianus (Shaw) …

MaleBiologiaChinaRanidaePelophylaxAndriasMolecular Sequence DataZoologyUrodelaDNA MitochondrialJaponicaJapanGenusDNA Ribosomal SpacerRNA Ribosomal 18SAnimalsRibosomal DNASpiruridaSpiruridaGeneral VeterinarybiologyBase SequenceLithobatesGeneral MedicineRibosomal RNADNA Helminthbiology.organism_classificationInfectious DiseasesInsect ScienceParasitologyFemaleParasitology research
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Phylogeny of entelegyne spiders: Affinities of the family Penestomidae (NEW RANK), generic phylogeny of Eresidae, and asymmetric rates of change in s…

2010

Penestomine spiders were first described from females only and placed in the family Eresidae. Discovery of the male decades later brought surprises, especially in the morphology of the male pedipalp, which features (among other things) a retrolateral tibial apophysis (RTA). The presence of an RTA is synapomorphic for a large clade of spiders exclusive of Eresidae. A molecular data matrix based on four loci was constructed to test two alternative hypotheses: (1) penestomines are eresids and the RTA is convergent, or (2) penestomines belong within the RTA clade. Taxon sampling concentrated on the Eresidae and the RTA clade, especially outside of the Dionycha and Lycosoidea. Evolution of the c…

MaleCybaeidaeZoologyEvolution MolecularEntelegynaeLycosoideaRNA Ribosomal 28SRNA Ribosomal 18SGeneticsAnimalsMolecular BiologyPhylogenyEcology Evolution Behavior and SystematicsLikelihood FunctionsModels GeneticbiologyAraneoideaBayes TheoremSpidersSequence Analysis DNAbiology.organism_classificationAgelenidaeFemaleCribellumDictynidaeSequence AlignmentAmaurobiidaeMolecular Phylogenetics and Evolution
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Heterochromatin of the scarab beetle, Bubas bison (Coleoptera: Scarabaeidae) II. Evidence for AT-rich compartmentalization and a high amount of rDNA …

2005

An unexpected result arising from a previous characterization of the scarab beetle Bubas bison (Coleoptera: Scarabaeidae) heterochromatin was its unusual homogeneous reaction to different staining methods. In particular, silver stainability of heterochromatic ends of all chromosomes prevented identification of the number of rDNA transcriptionally active regions. Data formerly obtained using silver impregnation (Ag-NOR), C- G- and DAPI banding are here improved and completed by application of CMA(3) staining and rDNA FISH with the aim to investigate heterochromatin base composition and locate rDNA regions with respect to NOR-associated heterochromatin. Our results show that B. bison has a hi…

MaleHeterochromatinGeneral Physics and AstronomyDNA Ribosomalchemistry.chemical_compoundStructural BiologyHeterochromatinBotanyRNA Ribosomal 18SAnimalsGeneral Materials ScienceGeneIn Situ Hybridization FluorescenceScarabaeidaeStaining and LabelingbiologyRNAKaryotypeCell BiologyTelomereRibosomal RNAbiology.organism_classificationAT Rich SequenceChromosome BandingStainingColeopterachemistryEvolutionary biologyKaryotypingFemaleDNAMicron
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Molecular and morphological evidence for three species of Diplostomum (Digenea: Diplostomidae), parasites of fishes and fish-eating birds in Spain

2014

Background Recent molecular studies have revealed high species diversity of Diplostomum in central and northern Europe. However, our knowledge of the distribution of Diplostomum spp. in the southern distributional range in Europe of the snail intermediate hosts (Lymnaea stagnalis and Radix spp.) is rather limited. This study aims to fill this gap in our knowledge using molecular and morphological evidence. Methods Nineteen fish species and six fish-eating bird species were sampled opportunistically in three regions (Catalonia, Extremadura and Aragon) in Spain. All isolates of Diplostomum spp. were characterised morphologically and molecularly. Partial sequences of the barcode region of the …

MaleLens metacercariaeEntomologyRange (biology)Molecular Sequence DataZoologyDiplostomum pseudospathaceumDigeneaBirdsFish DiseasesSensuAnimalsITS1-5.8S-ITS2CladePhylogenyFreshwater fishbiologyBird DiseasesEcologyResearchFishesSpecies diversityDiplostomum spathaceumCestode Infectionsbiology.organism_classificationGullsInfectious DiseasesPlatyhelminthsSpainFreshwater fishFemaleParasitologySpecies richnessCox1Parasites & Vectors
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ITS-2 rDNA sequencing of Gnathostoma species (Nematoda) and elucidation of the species causing human gnathostomiasis in the Americas.

2000

From several gnathostome species the complete internal transcribed spacer ITS-2 ribosomal DNA (rDNA) repeat sequence and a fragment of the 5.8S rDNA were obtained by direct polymerase chain reaction cycle-sequencing and silver-staining methods. The size of the complete ITS-1 sequence in agarose gel electrophoresis was also obtained. The ITS-2 enabled the differentiation of Gnathostoma spinigerum from Thailand and Gnathostoma binucleatum from Mexico and Ecuador and confirmed the validity of the latter. Gnathostoma turgidum, Gnathostoma sp. I (=Gnathostoma procyonis sensu Almeyda-Artigas et al., 1994), and Gnathostoma sp. II (=G. turgidum sensu Foster, 1939 pro parte), all from Mexico, proved…

MaleMolecular Sequence DataSpirurida InfectionsBiologyGnathostoma spinigerumDNA RibosomalPolymerase Chain Reactionlaw.inventionDogsSensulawConsensus SequencemedicineAnimalsHumansInternal transcribed spacerRibosomal DNAGnathostomaMexicoEcology Evolution Behavior and SystematicsPolymerase chain reactionRepetitive Sequences Nucleic AcidGeneticsGnathostomiasisGnathostomaElectrophoresis Agar GelBase SequenceFishesSpacer DNAOpossumsDNA Helminthmedicine.diseasebiology.organism_classificationRNA Ribosomal 5.8SParasitologyFemaleRaccoonsEcuadorSequence AlignmentThe Journal of parasitology
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Finding of Parastrongylus cantonensis (Chen, 1935) in Rattus rattus in Tenerife, Canary Islands (Spain).

2010

Parastrongylus cantonensis is a parasite of murid rodents that can infect humans and cause health problems as eosinophilic meningitis. Although it is endemic in south Asia, the Pacific islands, Australia, USA, and a few Caribbean islands, it has been extended to new geographical regions. In the Canary Islands (Spain) a survey of helminths of Rattus rattus, Rattus norvegicus and Mus musculus domesticus was carried out. Furthermore, five species of molluscs were examined for nematode larvae to determine whether they are potential intermediate hosts of P. cantonensis. Nematodes were found in the lungs of 15% of 67 R. rattus examined in Tenerife, one of the four studied islands, with a prevalen…

MaleNematodaVeterinary (miscellaneous)Molecular Sequence DataZoologyHelminth geneticsBiologyDNA RibosomalRodent DiseasesMiceDNA Ribosomal SpacermedicinePrevalenceRNA Ribosomal 18SHelminthsParasite hostingAnimalsCluster AnalysisInternal transcribed spacerMolluscaLungPhylogenyStrongylida InfectionsCaribbean islandBase SequenceAngiostrongylus cantonensisSequence Analysis DNARibosomal RNADNA Helminthmedicine.diseasebiology.organism_classificationRatsInfectious DiseasesMolluscaSpainInsect ScienceAngiostrongyliasisParasitologyFemaleSequence AlignmentActa tropica
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