Search results for "8S"

showing 10 items of 109 documents

Phylogenetic relationship among genera of Polymorphidae (Acanthocephala), inferred from nuclear and mitochondrial gene sequences.

2013

Abstract Acanthocephalans of the family Polymorphidae Meyer, 1931 are obligate endoparasites with complex life cycles. These worms use vertebrates (marine mammals, fish-eating birds and waterfowl) as definitive hosts and invertebrates (amphipods, decapods and euphausiids) as intermediate hosts to complete their life cycle. Polymorphidae has a wordwide distribution, containing 12 genera, with approximately 127 species. The family is diagnosed by having a spinose trunk, bulbose proboscis, double-walled proboscis receptacle, and usually four to eight tubular cement glands. To conduct a phylogenetic analysis, in the current study sequences of the small (18S) and large-subunit (28S) ribosomal RN…

ProfilicollisZoologyBiologyAcanthocephalaPolymorphidaeElectron Transport Complex IVEvolution MolecularMonophylyPhylogeneticsRNA Ribosomal 28SGeneticsRNA Ribosomal 18SAnimalsMolecular BiologyEcology Evolution Behavior and SystematicsGenes HelminthPhylogenyLikelihood FunctionsPhylogenetic treeModels GeneticBayes Theorembiology.organism_classificationMaximum parsimonyGenes MitochondrialCladogramRNA HelminthAcanthocephalaMultilocus Sequence TypingMolecular phylogenetics and evolution
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Aporocotyle mariachristinae n. sp., and A. ymakara VillalbaFernández, 1986 (Digenea: Aporocotylidae) of the pink cusk-eel, Genypterus blacodes (Ophid…

2012

Aporocotyle mariachristinae n. sp. and A. ymakara Villalba & Fernández, 1986 were collected from the bulbus arteriosus and ventral aorta of pink cusk-eels, Genypterus blacodes (Forster, 1801) from Patagonia, Argentina. A. mariachristinae n. sp. can be distinguished from all the species of Aporocotyle by the asymmetrical extension of posterior caeca (right posterior caecum longer, terminating at the area between mid-level of ovary and posterior body end; left posterior caecum shorter, terminating at the area between mid-level of cirrus sac and posterior to reproductive organs), the distribution of spines along the ventro-lateral body margins and the number of testes. The new species clearly …

RDNA SEQUENCESADN ribosomiqueOphidiiformesA. MARIACHRISTINAE N. SP.Aporocotyle//purl.org/becyt/ford/1 [https]A. YMAKARAFish DiseasesAPOROCOTYLIDAERNA Ribosomal 28SPatagoniaOPHIDIIDAEPatagonieAortaARGENTINAEelsbiologyHeartAnatomyGenypterus blacodesOriginal ContributionA. mariachristinae n. sp.PATAGONIAInfectious DiseasesGenypterus blacodesSÉQUENÇAGETrematodaTrematodaArgentinePATAGONIECIENCIAS NATURALES Y EXACTASGENYPTERUS BLACODESVeterinary (miscellaneous)Otras Ciencias BiológicasArgentinaBulbus arteriosusTrematode InfectionsDNA RibosomalDigeneaMerlucciuslcsh:Infectious and parasitic diseasesCaecumCiencias BiológicasOphidiidaeséquençageRNA Ribosomal 18SAnimalslcsh:RC109-216//purl.org/becyt/ford/1.6 [https]ARGENTINErDNA sequencesAPOROCOTYLEA. ymakarabiology.organism_classificationAporocotyleADN RIBOSOMIQUEAporocotylidaeInsect ScienceAnimal Science and ZoologyParasitologyParasite (Paris, France)
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Partial Methylation at Am100 in 18S rRNA of Baker's Yeast Reveals Ribosome Heterogeneity on the Level of Eukaryotic rRNA Modification

2014

Ribosome heterogeneity is of increasing biological significance and several examples have been described for multicellular and single cells organisms. In here we show for the first time a variation in ribose methylation within the 18S rRNA of Saccharomyces cerevisiae. Using RNA-cleaving DNAzymes, we could specifically demonstrate that a significant amount of S. cerevisiae ribosomes are not methylated at 2'-O-ribose of A100 residue in the 18S rRNA. Furthermore, using LC-UV-MS/MS of a respective 18S rRNA fragment, we could not only corroborate the partial methylation at A100, but could also quantify the methylated versus non-methylated A100 residue. Here, we exhibit that only 68% of A100 in t…

Science5.8S ribosomal RNAYeast and Fungal ModelsSaccharomyces cerevisiaeMycologyBiologyMethylationBiochemistryMicrobiologyMolecular GeneticsModel OrganismsMolecular cell biologyRRNA modification23S ribosomal RNANucleic Acidsddc:570GeneticsEukaryotic Small Ribosomal SubunitBiologyNucleic Acid ComponentsGeneticsMultidisciplinaryQRTranslation (biology)DNAMethylationRibosomal RNAYeastRNA processingBiochemistryRNA RibosomalRibosome SubunitsMedicineRNARibosomesResearch ArticlePLoS ONE
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CCDC 295282: Experimental Crystal Structure Determination

2006

Related Article: E.Schweizer, A.Hoffmann-Roder, K.Scharer, J.A.Olsen, C.Fah, P.Seiler, U.Obst-Sander, B.Wagner, M.Kansy, F.Diederich|2006|ChemMedChem|1|611|doi:10.1002/cmdc.200600015

Space GroupCrystallographyCrystal System(+)-4-((3aS4R8S8aR8bR)-2-(4-fluorobenzyl)-8-fluoro-13-dioxodecahydropyrrolo[34-a]pyrrolizin-4-yl)benzonitrileCrystal StructureCell ParametersExperimental 3D Coordinates
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CCDC 285891: Experimental Crystal Structure Determination

2006

Related Article: B.Frackowiak, K.Ochalik, A.Bialonska, Z.Ciunik, C.Wawrzenczyk, S.Lochynski|2006|Tetrahedron:Asymm.|17|124|doi:10.1016/j.tetasy.2005.11.025

Space GroupCrystallographyCrystal System(1S3S8S10R)-(+)-1111-Dimethyl-3-hydroxy-5-oxatricyclo(8.1.0^110^.0^38^)undecan-6-oneCrystal StructureCell ParametersExperimental 3D Coordinates
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CCDC 295280: Experimental Crystal Structure Determination

2006

Related Article: E.Schweizer, A.Hoffmann-Roder, K.Scharer, J.A.Olsen, C.Fah, P.Seiler, U.Obst-Sander, B.Wagner, M.Kansy, F.Diederich|2006|ChemMedChem|1|611|doi:10.1002/cmdc.200600015

Space GroupCrystallographyCrystal SystemCrystal Structure(+)-(3aS4R8S8aR8bR)-4-(4-bromophenyl)-2-(4-fluorobenzyl)-8-hydroxy-13-dioxodecahydropyrrolo[34-a]pyrrolizineCell ParametersExperimental 3D Coordinates
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CCDC 605711: Experimental Crystal Structure Determination

2006

Related Article: A.J.Blake, M.A.Gonzalez, M.J.Gil-Gimeno|2006|Acta Crystallogr.,Sect.C:Cryst.Struct.Commun.|62|o208|doi:10.1107/S0108270106006366

Space GroupCrystallographyCrystal SystemCrystal StructureCell Parameters(-)-(5S8S9R10S13R14R)-15-Acetoxy-1516-dideoxy-1617-epoxyspongian-16-oneExperimental 3D Coordinates
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Pythium regulare sp. nov., Isolated from the Canary Islands, Its Taxonomy, Its Region of rDNA, and Comparison with Related Species

2003

Pythium regulare (CI-34) was isolated from some soil samples taken in the Canary Islands (Spain). This new species is very closely related to P. irregulare isolated from pea roots in The Netherlands by Buisman in 1927. The species of Pythium are members of the kingdom Chromista. Pythium regulare is characterized by its ornamented oogonia bearing blunt or digitate spines, and its non-sporulating type of sporangia or hyphal bodies, its aplerotic oospores, its monoclinous and diclinous antheridia that at times crowd around the oogonia. The taxonomic description of this oomycete, the PCR of the internal transcribed region (spacers ITS1, ITS2, and the gene 5.8 S) of its ribosomal nuclear DNA as …

SporesHyphaMolecular Sequence DataPythiumBiologyDNA RibosomalPolymerase Chain ReactionApplied Microbiology and BiotechnologyMicrobiologySequence Homology Nucleic AcidDNA Ribosomal SpacerBotanyPythiumSoil MicrobiologyOomyceteBase SequenceSporangiumfood and beveragesSequence Analysis DNAGeneral MedicineRibosomal RNAbiology.organism_classificationRNA Ribosomal 5.8SSpainAntheridiumOosporeTaxonomy (biology)Sequence AlignmentCurrent Microbiology
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Characterization of Streptomyces venezuelae ATCC 10595 rRNA gene clusters and cloning of rrnA

1996

Streptomyces venezuelae ATCC 10595 harbors seven rRNA gene clusters which can be distinguished by BglII digestion. The three rRNA genes present in each set are closely linked with the general structure 16S-23S-5S. We cloned rrnA and sequenced the 16S-23S spacer region and the region downstream of the 5S rRNA gene. No tRNA gene was found in these regions.

Streptomyces venezuelaeMolecular Sequence Data5.8S ribosomal RNADNA RibosomalMicrobiology18S ribosomal RNA5S ribosomal RNASpecies SpecificityRibosomal protein23S ribosomal RNARNA Ribosomal 16SCloning MolecularInternal transcribed spacerMolecular BiologyGeneticsbiologyRNA Ribosomal 5SNucleic Acid HybridizationRNA ProbesRibosomal RNAbiology.organism_classificationMolecular biologyStreptomycesRNA Ribosomal 23SGenes BacterialRNA RibosomalMultigene FamilyResearch ArticleJournal of Bacteriology
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Morphological and molecular redescription of the myxozoanUnicapsula pflugfelderiSchubert, Sprague & Reinboth 1975 from two teleost hosts in the M…

2009

Elongate plasmodia with myxosporean spores belonging to the genus Unicapsula, Davis, 1924 were found in the skeletal muscle of the striped seabream, Lithognathus mormyrus (L.), a candidate for the mediterranean aquaculture. The only species of Unicapsula described from the Mediterranean is Unicapsula pflugfelderi Schubert et al. 1975, which occurs in the picarel, Spicara smaris (L.). For morphological and molecular comparison of U. pflugfelderi from S. smaris with Unicapsula sp. from L. mormyrus measurements of plasmodia and spores, ultrastructural details and 18S and 28S rDNA sequences were analysed. Whereas plasmodia were 2-3 times larger in S. smaris than in L. mormyrus (length 2.47-0.81…

Striped seabreamParasitic Diseases AnimalVeterinary (miscellaneous)ZoologyAquatic ScienceBiologyFish DiseasesMicroscopy Electron TransmissionSpecies SpecificityRNA Ribosomal 28SMediterranean SeaRNA Ribosomal 18SAnimalsSpicara smarisMyxozoaMuscle SkeletalRibosomal DNAPhylogenyMormyrusSporoplasmfungibiology.organism_classificationSea BreamPerciformesSporeDNA GyraseMicroscopy Electron ScanningUltrastructureTaxonomy (biology)Journal of Fish Diseases
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