Search results for "ABUNDANCE"

showing 10 items of 529 documents

Helminth parasitizing <em>Iberolacerta cyreni</em> (Müller et Hellmich, 1937) from Gredos Mountains, Iberian Peninsula

2017

A survey of the helminth communities of a population of Iberolacerta cyreni (Müller et Hellmich, 1937), a small lizard endemic to Sistema Central (Iberian Peninsula), was conducted to determine the prevalence, abundance and species diversity of parasites of these reptiles. Four species of helminths were found, one trematode, Plagiorchis molini Lent et Freitas, 1940, one cestode, Nematotaenia tarentolae López-Neyra, 1944, and two nematodes, Skrjabinelazia sp. and Spauligodon carbonelli Roca & García-Adell, 1988. Helminth infracommunities of I. cireny showed very low values of abundance and species richness and diversity, being similar to other European lizards. The parasites found seem t…

Plagiorchiseducation.field_of_studyfood.ingredientbiologyLizardPopulationSpecies diversityZoologybiology.organism_classificationIberolacerta cyrenifoodAbundance (ecology)biology.animalConservation statusGeneral Materials ScienceSpecies richnesseducationBasic and Applied Herpetology
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Evolution of Bacterial Community in a Full-scale Biotrickling Filter by Fluorescence in Situ Hybridization (FISH)

2012

The performance of a full-scale biotrickling system for the treatment of exhaust gases from two different paint sources at a furniture facility, was investigated applying Fluorescense in situ hybridization (FISH). This technique allowed the detection of major bacteria groups and, therefore, helped in understanding complex microbial communities. The results indicated that Alphaproteobacteria, Betaproteobacteria, Gammaproteobacteria, and Deltaproteobacteria were more predominant than Firmicutes and Actiniobacterias. In addition, a variation in the composition of the bacterial community throughout the time of operation and with the paint source was observed. Betaproteobacteria showed similar r…

PollutantbiologyChemistryFirmicutesEnvironmental engineeringAlphaproteobacteriaGeneral MedicineQuímicabiology.organism_classificationDeltaproteobacteriaEnvironmental chemistryGammaproteobacteriaRelative species abundanceEngineering(all)BetaproteobacteriaBacteria
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Missing the rarest: is the positive interspecific abundance–distribution relationship a truly general macroecological pattern?

2009

Lepidopterists have long acknowledged that many uncommon butterfly species can be extremely abundant in suitable locations. If this is generally true, it contradicts the general macroecological pattern of the positive interspecific relationship between abundance and distribution, i.e. locally abundant species are often geographically more widespread than locally rare species. Indeed, a negative abundance–distribution relationship has been documented for butterflies in Finland. Here we show, using the Finnish butterflies as an example, that a positive abundance–distribution relationship results if the geographically restricted species are missed, as may be the case in studies based on random…

Population DensityEcologyRange (biology)EcologyRare speciesBiodiversityBiodiversityInterspecific competitionEnvironmentBiologyClassificationBiological EvolutionAgricultural and Biological Sciences (miscellaneous)LepidopteraSpecies SpecificityCommunity EcologyCommon speciesAbundance (ecology)AnimalsGeneral Agricultural and Biological SciencesOccupancy–abundance relationshipFinlandPhylogenyMacroecologyBiology Letters
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Inferring species interactions from ecological survey data: a mechanistic approach to predict quantitative food webs of seed-feeding by carabid beetl…

2020

AbstractEcological networks are valuable for ecosystem analysis but their use is often limited by a lack of data because many types of ecological interaction, e.g. predation, are short-lived and difficult to observe or detect. There are different methods for inferring the presence of interactions, which we lack methods to predict interaction strengths and so use weighted network analysis.Here, we develop a trait-based approach suitable for creating quantitative networks, i.e. with varying interaction strengths. We developed the method for seed-feeding carabid ground beetles (Coleoptera: Carabidae) although the principles can be applied to other interactions.We used existing literature data …

Population levelAbundance (ecology)Cost indexEcologyEcosystem analysisTraitEnvironmental scienceSurvey data collectionWeighted networkPredation
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Diversity of freshwater Epsilonproteobacteria and dark inorganic carbon fixation in the sulphidic redoxcline of a meromictic karstic lake.

2015

Sulfidic redoxclines are a suitable niche for the growth and activity of different chemo- and photolithotrophic sulphide-oxidizing microbial groups such as the Epsilonproteobacteria and the green sulfur bacteria (GSB). We have investigated the diversity, abundance and contribution to inorganic carbon uptake of Epsilonproteobacteria in a meromictic basin of Lake Banyoles. CARD-FISH counts revealed that Epsilonproteobacteria were prevalent at the redoxcline in winter (maximum abundance of 2 × 10(6) cells mL(-1), ≈60% of total cells) but they were nearly absent in summer, when GSB bloomed. This seasonal trend was supported by 16S rRNA gene pyrotag datasets, which revealed that the epsilonprote…

Populationchemistry.chemical_elementFresh WaterApplied Microbiology and BiotechnologyMicrobiologyCarbon CycleChlorobiTotal inorganic carbonAbundance (ecology)RNA Ribosomal 16SAutotropheducationIn Situ Hybridization FluorescencePhylogenyArcobactereducation.field_of_studyAutotrophic ProcessesEpsilonproteobacteriaEcologybiologyEcologyCarbon Dioxidebiology.organism_classificationSulfurCarbonLakeschemistryArcobacterGreen sulfur bacteriaFEMS microbiology ecology
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Comparison of the fish assemblages associated with Posidonia oceanica after the partial loss and consequent fragmentation of the meadow

2005

An extensive Posidonia oceanica meadow was partially destroyed by excavation, resulting in areas of seagrass habitat of equal complexity (shoot density) but different heterogeneity (degree of fragmentation). The fish assemblages associated with differently fragmented beds were compared from a landscape perspective. Differences in the fish assemblages were detected, with several species showing different patterns: (1) species that increased their abundance along with the degree of bed fragmentation, (2) species that were more abundant in fragmented beds, but did not show differences between more or less fragmented beds, and (3) species that were mostly abundant in large seagrass patches or i…

PotamogetonaceaeSeagrassMediterranean seabiologyHabitatAbundance (ecology)EcologyPosidonia oceanicaCommunity structureFragmentation (computing)Aquatic ScienceOceanographybiology.organism_classificationEstuarine, Coastal and Shelf Science
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Mass-spectrometric identification of primary biological particle markers: indication for low abundance of primary biological material in the pristine…

2011

Abstract. The abundance of marker compounds for primary biological particles in submicron aerosol was investigated by means of aerosol mass spectrometry. Mass spectra of amino acids, carbohydrates, small peptides, and proteins, all of which are key building blocks of biological particles, were recorded in laboratory experiments. Several characteristic marker peaks were identified. The identified marker peaks were compared with mass spectra recorded during AMAZE-08, a field campaign conducted in the pristine rainforest of the Central Amazon Basin, Brazil, during the wet season of February and March 2008. The low abundance of identified marker peaks places upper limits of 7.5 % for amino acid…

Primary (chemistry)Abundance (ecology)ChemistryEnvironmental chemistryParticleMass spectrometricBiological materialsAerosol
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The influence of environmental factors on abundance and prevalence of a commensal ostracod hosted by an invasive crayfish: are ‘parasite rules’ relev…

2014

Summary Symbiosis represents a widespread and successful lifestyle, but research on symbiotic associations has been mainly focused on parasites. Three general patterns in parasite ecology have been proposed: (i) aggregation, (ii) positive and tight correlation between mean symbiont abundance and its variance and (iii) positive correlation between abundance and prevalence of symbionts. The factors affecting abundance and prevalence within symbiont species can be grouped into host features and environmental conditions. According to research in parasite ecology, environmental conditions seem to play a minor role. We investigated whether the three most recognised parasite patterns were also evi…

Procambarus clarkiieducation.field_of_studybiologyHost (biology)EcologyPopulationAquatic animalAquatic Sciencebiology.organism_classificationCrayfishSymbiosisAbundance (ecology)OstracodeducationFreshwater Biology
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According to the CPLL proteome sheriffs, not all aperitifs are created equal!

2014

Combinatorial peptide ligand libraries (CPLLs) have been adopted for investigating the proteome of a popular aperitif in Northern Italy, called "Amaro Branzi", stated to be an infusion of a secret herbal mixture, of which some ingredients are declared on the label, namely Angelica officinalis, Gentiana lutea and orange peel, sweetened by a final addition of honey. In order to assess the genuineness of this commercial liqueur, we have prepared extracts of the three vegetable ingredients, assessed their proteomes, and compared them to the one found in the aperitif. The amaro's proteome was identified via prior capture with CPLLs at two different pH values (2.2 and 4.8). Via mass spectrometry …

ProteomeGenomic dataBiophysicsOrange (colour)BiochemistryAnalytical ChemistryGentiana luteaPeptide LibraryHumansGentianaAngelica officinalis; Aperitifs; Combinatorial peptide ligand libraries; Gentiana lutea; Low abundance proteome; Mass spectrometry; Alcoholic Beverages; Angelica; Citrus sinensis; Fruit; Gentiana; Honey; Humans; Hydrogen-Ion Concentration; Mass Spectrometry; Peptide Library; Plant Extracts; Plant Proteins; Proteome; Biochemistry; Biophysics; Analytical Chemistry; Molecular BiologyLow abundance proteomeMolecular BiologyAngelicaPlant ProteinsChromatographybiologyMass spectrometryPlant ExtractsAlcoholic BeveragesHoneyHydrogen-Ion Concentrationbiology.organism_classificationNorthern italyAperitifsFruitOfficinalisProteomeAngelica officinalisGentiana luteaCombinatorial peptide ligand librariesCitrus × sinensisGentianaCitrus sinensis
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Cellular effects of bacterial N-3-Oxo-dodecanoyl-L-Homoserine lactone on the sponge Suberites domuncula (Olivi, 1792): insights into an intimate inte…

2014

International audience; Sponges and bacteria have lived together in complex consortia for 700 million years. As filter feeders, sponges prey on bacteria. Nevertheless, some bacteria are associated with sponges in symbiotic relationships. To enable this association, sponges and bacteria are likely to have developed molecular communication systems. These may include molecules such as N-acyl-L-homoserine lactones, produced by Gram-negative bacteria also within sponges. In this study, we examined the role of N-3-oxododecanoyl-L-homoserine lactone (3-oxo-C12-HSL) on the expression of immune and apoptotic genes of the host sponge Suberites domuncula. This molecule seemed to inhibit the sponge inn…

ProteomicsApoptosisPathogenesisPathology and Laboratory MedicineBiochemistrycaspase 74-Butyrolactonecaspase 3lcsh:ScienceCytoskeletoncaspase like 7 gene0303 health sciencesToll-like receptorMarine Ecologytoll like receptorGenomicsproto oncogeneEndocytosisCell biologySuberites domunculaCellular Structures and Organellesalpha actininCell signalingtoll like receptor associated factor 6Gram negative bacteriumparacrine signalingMicrobiology03 medical and health sciencesGeneticsRNA Messengerhost pathogen interactionprotein expressiontwo dimensional electrophoresisBacteria030306 microbiologyEcology and Environmental Scienceslcsh:RBiology and Life SciencesComputational BiologyImmunity Innatecarrier proteinSpongebacterial membranelcsh:Qimmunological toleranceSuberitesProtein AbundanceSuberitessuberites domuncula[SDV]Life Sciences [q-bio]lcsh:MedicineMolecular Cell BiologyMedicine and Health Sciencesinnate immunityperforinMultidisciplinaryEcologybiologymessenger RNAarticlecell communicationAnimal Modelsmatrix assisted laser desorption ionization time of flight mass spectrometryunclassified drugPoriferaHost-Pathogen InteractionscytotoxicityactinTranscriptome Analysishormone actionResearch ArticleSymbiotic bacteriaprotein bcl 2Marine BiologycofilinResearch and Analysis Methodsn (3 oxododecanoyl)homoserine lactoneMicrobial EcologycogninModel OrganismsHomoserineAnimalscontrolled study14. Life underwatergeneSymbiosiscell viabilityadenosine triphosphatase030304 developmental biologynonhumanChemical EcologyMembrane ProteinsCell Biologytumor necrosis factor receptor associated factor 6Genome Analysisbiology.organism_classificationalpha tubulinGene Expression RegulationMembrane proteingene expressioncaspase like 3 geneGenome Expression AnalysisBacteriaPLoS ONE
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