Search results for "ALGORITHMS"

showing 10 items of 1716 documents

Ligand-based discovery of novel trypanosomicidal drug-like compounds: In silico identification and experimental support

2010

Abstract Two-dimensional bond-based linear indices and linear discriminant analysis are used in this report to perform a quantitative structure–activity relationship study to identify new trypanosomicidal compounds. A database with 143 anti-trypanosomal and 297 compounds having other clinical uses, are utilized to develop the theoretical models. The best discriminant models computed using bond-based linear indices provides accuracies greater than 90 for both training and test sets. Our models identify as anti-trypanosomals five out of nine compounds of a set of already-synthesized substances. The in vitro anti-trypanosomal activity of this set against epimastigote forms of Trypanosoma cruzi…

Databases FactualMolecular modelCell SurvivalStereochemistryTrypanosoma cruziIn silicoNitro compoundQuantitative Structure-Activity RelationshipComputational biologyLigandsChemometricsDrug DiscoveryAnimalsHumansChagas DiseaseTrypanosoma cruziAmastigotePharmacologychemistry.chemical_classificationLife Cycle StagesbiologyOrganic ChemistryDiscriminant AnalysisBiological activityGeneral MedicineFibroblastsModels Theoreticalbiology.organism_classificationLinear discriminant analysisTrypanocidal AgentsHigh-Throughput Screening AssayschemistryAlgorithmsSoftwareEuropean Journal of Medicinal Chemistry
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Exudate-based diabetic macular edema detection in fundus images using publicly available datasets

2010

International audience; Diabetic macular edema (DME) is a common vision threatening complication of diabetic retinopathy. In a large scale screening environment DME can be assessed by detecting exudates (a type of bright lesions) in fundus images. In this work, we introduce a new methodology for diagnosis of DME using a novel set of features based on colour, wavelet decomposition and automatic lesion segmentation. These features are employed to train a classifier able to automatically diagnose DME through the presence of exudation. We present a new publicly available dataset with ground-truth data containing 169 patients from various ethnic groups and levels of DME. This and other two publi…

Databases Factualgenetic structuresFeature extractionDiabetic macular edemaHealth Informatics02 engineering and technologySensitivity and SpecificityMacular Edema030218 nuclear medicine & medical imagingPattern Recognition Automated03 medical and health sciences0302 clinical medicineWavelet decompositionWaveletImage Interpretation Computer-Assisted[ INFO.INFO-TI ] Computer Science [cs]/Image Processing0202 electrical engineering electronic engineering information engineeringFalse positive paradoxMedicineHumansRadiology Nuclear Medicine and imagingComputer visionGround truthDiabetic RetinopathyRadiological and Ultrasound Technologybusiness.industryReproducibility of ResultsDiabetic retinopathyExudates and Transudatesmedicine.diseaseImage EnhancementComputer Graphics and Computer-Aided Designeye diseases[INFO.INFO-TI]Computer Science [cs]/Image Processing [eess.IV]020201 artificial intelligence & image processingComputer Vision and Pattern RecognitionArtificial intelligencebusinessClassifier (UML)AlgorithmsRetinoscopy
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Facial geometry and speech analysis for depression detection.

2017

Depression is one of the most prevalent mental disorders, burdening many people world-wide. A system with the potential of serving as a decision support system is proposed, based on novel features extracted from facial expression geometry and speech, by interpreting non-verbal manifestations of depression. The proposed system has been tested both in gender independent and gender based modes, and with different fusion methods. The algorithms were evaluated for several combinations of parameters and classification schemes, on the dataset provided by the Audio/Visual Emotion Challenge of 2013 and 2014. The proposed framework achieved a precision of 94.8% for detecting persons achieving high sc…

Decision support systemFacial expressionDepressive DisorderDepressionSpeech recognition05 social sciencesNearest neighbourClassification scheme02 engineering and technologyFacial geometryBinary operationFace0502 economics and business0202 electrical engineering electronic engineering information engineeringDecision fusionHumansSpeech020201 artificial intelligence & image processingPsychologyClassifier (UML)050203 business & managementAlgorithmsAnnual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
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A knowledge-based decision support system in bioinformatics: An application to protein complex extraction

2013

Abstract Background We introduce a Knowledge-based Decision Support System (KDSS) in order to face the Protein Complex Extraction issue. Using a Knowledge Base (KB) coding the expertise about the proposed scenario, our KDSS is able to suggest both strategies and tools, according to the features of input dataset. Our system provides a navigable workflow for the current experiment and furthermore it offers support in the configuration and running of every processing component of that workflow. This last feature makes our system a crossover between classical DSS and Workflow Management Systems. Results We briefly present the KDSS' architecture and basic concepts used in the design of the knowl…

Decision support systemSaccharomyces cerevisiae ProteinsComputer scienceKnowledge BasesCrossovercomputer.software_genreBioinformaticslcsh:Computer applications to medicine. Medical informaticsBiochemistryDecision Support TechniquesWorkflowSoftwareknowledge base; decision support systemStructural BiologyArtificial IntelligenceProtein Interaction MappingPreprocessorCluster analysisMolecular Biologylcsh:QH301-705.5Settore ING-INF/05 - Sistemi Di Elaborazione Delle Informazionibusiness.industryApplied MathematicsResearchComputational BiologyComputer Science ApplicationsWorkflowKnowledge baselcsh:Biology (General)Multiprotein Complexesprotein complex extractionlcsh:R858-859.7Data miningbusinesscomputerWorkflow management systemAlgorithmsSoftware
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An automated image analysis methodology for classifying megakaryocytes in chronic myeloproliferative disorders

2008

This work describes an automatic method for discrimination in microphotographs between normal and pathological human megakaryocytes and between two kinds of disorders of these cells. A segmentation procedure has been developed, mainly based on mathematical morphology and wavelet transform, to isolate the cells. The features of each megakaryocyte (e.g. area, perimeter and tortuosity of the cell and its nucleus, and shape complexity via elliptic Fourier transform) are used by a regression tree procedure applied twice: the first time to find the set of normal megakaryocytes and the second to distinguish between the pathologies. The output of our classifier has been compared to the interpretati…

Decision treeReproducibility of ResultHealth InformaticsMathematical morphologySensitivity and SpecificityWavelet analysiPattern Recognition Automatedsymbols.namesakeWaveletMegakaryocyteMegakaryocyteArtificial IntelligenceImage Interpretation Computer-AssistedmedicineAnimalsHumansRadiology Nuclear Medicine and imagingComputer visionSegmentationMyeloproliferative DisorderCells Cultured1707MathematicsHealth InformaticMyeloproliferative DisordersSettore INF/01 - InformaticaRadiological and Ultrasound TechnologyAnimalbusiness.industryMorphometryReproducibility of ResultsWavelet transformPattern recognitionAutomatic classification; Elliptic Fourier transform; Morphometry; Wavelet analysis; Animals; Cells Cultured; Humans; Image Enhancement; Image Interpretation Computer-Assisted; Megakaryocytes; Myeloproliferative Disorders; Pattern Recognition Automated; Reproducibility of Results; Sensitivity and Specificity; Algorithms; Artificial Intelligence; Computer Graphics and Computer-Aided Design; 1707; Radiology Nuclear Medicine and Imaging; Health Informatics; Radiological and Ultrasound TechnologyImage EnhancementComputer Graphics and Computer-Aided DesignAlgorithmFourier transformmedicine.anatomical_structuresymbolsAutomatic classificationElliptic Fourier transformComputer Vision and Pattern RecognitionArtificial intelligencebusinessMegakaryocytesClassifier (UML)AlgorithmsHumanMedical Image Analysis
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A Simple and Efficient Deep Learning-Based Framework for Automatic Fruit Recognition

2022

Accurate detection and recognition of various kinds of fruits and vegetables by using the artificial intelligence (AI) approach always remain a challenging task due to similarity between various types of fruits and challenging environments such as lighting and background variations. Therefore, developing and exploring an expert system for automatic fruits’ recognition is getting more and more important after many successful approaches; however, this technology is still far from being mature. The deep learning-based models have emerged as state-of-the-art techniques for image segmentation and classification and have a lot of promise in challenging domains such as agriculture, where they can …

Deep LearningGeneral Computer ScienceArticle SubjectArtificial IntelligenceGeneral MathematicsGeneral NeuroscienceFruitGeneral MedicineNeural Networks ComputerVDP::Teknologi: 500::Informasjons- og kommunikasjonsteknologi: 550Algorithms
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Development of an imaging system dedicated to the acquisition analysis and multispectral characterisation of skin lesion

2011

Visual evaluation of cutaneous lesions is the analysis the most commonly performedby dermatologists. This diagnostic is mainly done by naked eye and is based on criterionsuch as the size, shape, symmetry but principally on colour of the lesions. However, thisanalysis is subjective because it depends on the practician experience and the acquisitionconditions. We propose in this dissertation (1) the development of a multispectralcamera specifically dedicated for dermatological use. This device is based on a filterwheel composed of interferential filters and a neural network-based algorithm, generatinga hyperspectral cube of cutaneous data. This setting combines advantage of both spectrophotom…

Dermatologie[SDV.MHEP] Life Sciences [q-bio]/Human health and pathologyAlgorithmes évolutionnairesReconstruction spectrale[INFO.INFO-OH]Computer Science [cs]/Other [cs.OH]DermatologyLight propagation model in skinImagerie multispectrale[INFO.INFO-OH] Computer Science [cs]/Other [cs.OH]Multispectral imagingSpectral reconstructionModèle de propagation de la lumière dans la peau[ SDV.MHEP ] Life Sciences [q-bio]/Human health and pathology[ INFO.INFO-OH ] Computer Science [cs]/Other [cs.OH]Evolutionnary algorithms[SDV.MHEP]Life Sciences [q-bio]/Human health and pathology
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Modeling, evaluation, and scale on artificial pedestrians: a literature review

2017

Modeling pedestrian dynamics and their implementation in a computer are challenging and important issues in the knowledge areas of transportation and computer simulation. The aim of this article is to provide a bibliographic outlook so that the reader may have quick access to the most relevant works related to this problem. We have used three main axes to organize the article's contents: pedestrian models, validation techniques, and multiscale approaches. The backbone of this work is the classification of existing pedestrian models; we have organized the works in the literature under five categories, according to the techniques used for implementing the operational level in each pedestrian …

DesignGeneral Computer ScienceComputer sciencemedia_common.quotation_subjectPerformance02 engineering and technologyPedestriancomputer.software_genreTheoretical Computer SciencePedestrian modeling and simulationCrowdsSimulació per ordinador0502 economics and business0202 electrical engineering electronic engineering information engineeringScale sizeAlgorismes computacionalsQuality (business)Macromedia_commonInformática050210 logistics & transportationFocus (computing)MultimediaValidation methodsScale (chemistry)05 social sciencesVerificationMultiscale simulation020207 software engineeringCrowdsData scienceValidation methodsMacroscopic and microscopic pedestrian modelscomputerAlgorithms
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Combining Haar Wavelet and Karhunen Loeve Transforms for Medical Images Watermarking

2014

This paper presents a novel watermarking method, applied to the medical imaging domain, used to embed the patient’s data into the corresponding image or set of images used for the diagnosis. The main objective behind the proposed technique is to perform the watermarking of the medical images in such a way that the three main attributes of the hidden information (i.e., imperceptibility, robustness, and integration rate) can be jointly ameliorated as much as possible. These attributes determine the effectiveness of the watermark, resistance to external attacks, and increase the integration rate. In order to improve the robustness, a combination of the characteristics of Discrete Wavelet and K…

Diagnostic ImagingArticle SubjectComputer scienceWavelet Analysislcsh:Medicine02 engineering and technologyGeneral Biochemistry Genetics and Molecular BiologyWaveletRobustness (computer science)[ INFO.INFO-TI ] Computer Science [cs]/Image Processing0202 electrical engineering electronic engineering information engineeringDigital watermarkingComputer SecurityBlock (data storage)Karhunen–Loève theoremGeneral Immunology and Microbiologybusiness.industryVisibility (geometry)lcsh:RReproducibility of Results020207 software engineeringPattern recognitionWatermarkGeneral MedicineHaar wavelet[INFO.INFO-TI] Computer Science [cs]/Image Processing [eess.IV][INFO.INFO-TI]Computer Science [cs]/Image Processing [eess.IV]020201 artificial intelligence & image processingArtificial intelligencebusinessAlgorithmsResearch Article
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Multispectral integral imaging acquisition and processing using a monochrome camera and a liquid crystal tunable filter

2012

This paper presents an acquisition system and a procedure to capture 3D scenes in different spectral bands. The acquisition system is formed by a monochrome camera, and a Liquid Crystal Tunable Filter (LCTF) that allows to acquire images at different spectral bands in the [480, 680]nm wavelength interval. The Synthetic Aperture Integral Imaging acquisition technique is used to obtain the elemental images for each wavelength. These elemental images are used to computationally obtain the reconstruction planes of the 3D scene at different depth planes. The 3D profile of the acquired scene is also obtained using a minimization of the variance of the contribution of the elemental images at each …

Diagnostic ImagingPoint spread functionSynthetic aperture radarOptics and PhotonicsSkin NeoplasmsLightComputer scienceMultispectral imageImage processingPattern Recognition AutomatedMultispectral pattern recognitionImaging Three-DimensionalOpticsThree-dimensional image acquisitionImage Processing Computer-AssistedmedicineLiquid crystal tunable filterHumansMonochromeMelanomaThree-dimensional sensingIntegral imagingModels StatisticalPixelbusiness.industryLiquid Crystal Tunable FilterThree-dimensional image processingReproducibility of ResultsEquipment DesignSpectral bandsMultispectral and hyperspectral imagingmedicine.diseaseAtomic and Molecular Physics and OpticsLiquid CrystalsSkin cancerbusinessAlgorithms
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