Search results for "ALLELES"

showing 10 items of 478 documents

A familial disorder of altered DNA-methylation

2014

BackgroundIn a subset of imprinting disorders caused by epimutations, multiple imprinted loci are affected. Familial occurrence of multilocus imprinting disorders is rare.Purpose/objectiveWe have investigated the clinical and molecular features of a familial DNA-methylation disorder.MethodsTissues of affected individuals and blood samples of family members were investigated by conventional and molecular karyotyping. Sanger sequencing and RT-PCR of imprinting-associated genes (NLRP2, NLRP7, ZFP57, KHDC3L, DNMT1o), exome sequencing and locus-specific, array-based and genome-wide technologies to determine DNA-methylation were performed.ResultsIn three offspring of a healthy couple, we observed…

EpigenomicsMaleGeneticsSanger sequencingDNA Mutational AnalysisGenetic Diseases InbornInfant NewbornMedizinDNA MethylationBiologyPedigreesymbols.namesakeDNA methylationGeneticssymbolsHumansFemaleEpigeneticsImprinting (psychology)Genomic imprintingGeneAllelesGenetics (clinical)Exome sequencingEpigenomics
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The molecular basis of the low hemolytic activity of C4 molecules from low-C4 mice with IgM-coated erythrocytes.

1989

This study investigated the origin of the different hemolytic activity of two allotypes of murine C4, C4H (C4-high) and C4L (C4-low) in the presence of IgM-coated erythrocytes. C4H displayed a threefold higher hemolytic titer (expressed in hemolytic units/microgram protein) than C4L. No difference was found between c4H and C4L either in stability at 37 degrees C at different pH values and in the rate of C4H and C4L hydrolysis by activated Cl. The major functional difference was found in the covalent binding capacity to IgM-coated erythrocytes, with the amount of C4H bound being about threefold higher than that of C4L. A marked difference in the reactivity of the C4b fragment of C4H and C4L …

ErythrocytesImmunologyMice Inbred StrainsBiologyHemolysisMethylaminesMiceComplementary DNAImidoestersmedicineImmunology and AllergyAnimalsComplement ActivationAllelesSouthern blotMessenger RNAComplement C5Biological activityComplement C4Complement C3Hydrogen-Ion Concentrationmedicine.diseaseHemolysisRed blood cellBlotting Southernmedicine.anatomical_structureBiochemistryGenesGlycinebiology.proteinAntibodyProtein BindingEuropean journal of immunology
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Quantitative genetic analysis of Cry1Ab tolerance in Ostrinia nubilalis Spanish populations

2013

30 p.-2 fig.-3 tab.

European corn borerInsecticidesOffspringEuropean corn borerBacillus thuringiensisMothsGenetic analysisOstriniaLepidoptera genitaliaInsecticide ResistanceHeritabilityHemolysin ProteinsBacterial ProteinsBacillus thuringiensisToxicity TestsAnimalsGeneEcology Evolution Behavior and SystematicsGeneticsbiologyBacillus thuringiensis ToxinsfungiPartial resistance allelesfood and beveragesHeritabilitybiology.organism_classificationCadherinsEPIC-PCREndotoxinsSpainCadherinInsect Proteins
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On the complexity of the Saccharomyces bayanus taxon: Hybridization and potential hybrid speciation

2014

Although the genus Saccharomyces has been thoroughly studied, some species in the genus has not yet been accurately resolved; an example is S. bayanus, a taxon that includes genetically diverse lineages of pure and hybrid strains. This diversity makes the assignation and classification of strains belonging to this species unclear and controversial. They have been subdivided by some authors into two varieties (bayanus and uvarum), which have been raised to the species level by others. In this work, we evaluate the complexity of 46 different strains included in the S. bayanus taxon by means of PCR-RFLP analysis and by sequencing of 34 gene regions and one mitochondrial gene. Using the sequenc…

Evolutionary GeneticsSaccharomyces bayanusDIVERSITYSequence Homologylcsh:MedicineSaccharomycesPolymerase Chain Reaction//purl.org/becyt/ford/1 [https]Genética y HerenciaPCR-RFLP analysisFungal EvolutionCluster Analysislcsh:ScienceGenome EvolutionPhylogenyGeneticsMultidisciplinarySACCHAROMYCES EUBAYANUSPhylogenetic analysisbiologyStrain (biology)Systems BiologyGenomicsS. bayanusPolymorphism Restriction Fragment LengthCIENCIAS NATURALES Y EXACTASResearch ArticleEvolutionary ProcessesGenetic SpeciationMolecular Sequence DataIntrogressionMycologyGenome ComplexityMicrobiologyGenètica molecularCiencias BiológicasSaccharomycesSpecies SpecificityPhylogeneticsGenetic variationGeneticsYEAST//purl.org/becyt/ford/1.6 [https]HybridizationAllelesHybridEvolutionary BiologyBase Sequencelcsh:ROrganismsFungiBiology and Life SciencesComputational BiologyGenetic VariationSACCHAROMYCES PASTORIANUSSequence Analysis DNAComparative Genomicsbiology.organism_classificationYeastGenetics PopulationHaplotypesFungal ClassificationHybridization GeneticHybrid speciationlcsh:Q
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Ras-pathway has a dual role in yeast galactose metabolism

2007

AbstractIn the yeast Saccharomyces cerevisiae the genes involved in galactose metabolism (GAL1,7,10) are transcriptionally activated more than a 1000-fold in the presence of galactose as the sole carbon source in the culture media. In the present work, we monitored the activity of the GAL10 gene promoter in different Ras-cAMP genetic backgrounds. We demonstrate that overexpression of C-terminus of the nucleotide exchange factor Cdc25p stimulates GAL10 transcription in yeast strains carrying the contemporary deletion of both RAS genes. Moreover, the deletion of the chromosomal CDC25 gene provokes impaired growth on galactose based media in yeast strain lacking both RAS genes and adenylate cy…

Galactose metabolismSaccharomyces cerevisiae ProteinsSaccharomyces cerevisiaeBiophysicsGene ExpressionSaccharomyces cerevisiaeRas glucose and galactose metabolism cancerGTP-binding proteinSignal transductionBiochemistryLeloir pathwaychemistry.chemical_compoundRas-GRF1Protein kinase AStructural BiologyGenes ReporterGene Expression Regulation FungalGeneticsRNA MessengerProtein kinase APromoter Regions GeneticMolecular BiologyChromosomal DeletionAllelesbiologyras-GRF1GalactosePromoterCell Biologybiology.organism_classificationLeloir pathwayExchange factorPhenotypechemistryBiochemistryGalactoseras ProteinsSignal transductionGene DeletionAdenylyl CyclasesPlasmidsFEBS Letters
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Absence of spatial genetic structure in common dentex (Dentex dentex Linnaeus, 1758) in the Mediterranean Sea as evidenced by nuclear and mitochondri…

2018

International audience; The common dentex, Dentex dentex, is a fish species which inhabits marine environments in the Mediterranean and Northeast Atlantic regions. This is an important species from an ecological, economic and conservation perspective, however critical information on its population genetic structure is lacking. Most samples were obtained from the Mediterranean Sea (17 sites) with an emphasis around Corsica (5 sites), plus one Atlantic Ocean site. This provided an opportunity to examine genetic structuring at local and broader scales to provide science based data for the management of fishing stocks in the region. Two mitochondrial regions were examined (D-loop and COI) along…

Gene Flow0106 biological sciences0301 basic medicinePopulation geneticsPopulationZoologyPopulation geneticslcsh:MedicineDNA Mitochondrial010603 evolutionary biology01 natural sciencesMarine fish03 medical and health sciencesMediterranean seaGene FrequencyMediterranean SeaAnimals14. Life underwatereducationlcsh:ScienceAtlantic OceanAllelesPhylogenyIsolation by distanceCell NucleusPanmixiaeducation.field_of_studyMultidisciplinary[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]biologylcsh:RGenetic VariationBayes TheoremDentex dentexbiology.organism_classificationMitochondrial DNAMitochondriaPerciformesDentex dentex D-loop COI microsatellite loci Mediterranean Sea Atlantic Ocean.Polymerase chain reactionPhylogeographyPhylogeography[SDV.GEN.GA]Life Sciences [q-bio]/Genetics/Animal geneticsGenetics Population030104 developmental biologyHaplotypesGenetic structurelcsh:QMicrosatellite RepeatsPLoS ONE
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Gene expression of neuregulin-1 isoforms in different brain regions of elderly schizophrenia patients

2010

One important risk gene in schizophrenia is neuregulin-1 (NRG1), which is expressed in different isoforms in the brain. To determine if alterations of NRG1 are present in schizophrenia, we measured gene expression of NRG1 and its main isoforms as well as the impact of genetic variation of NRG1 in an exploratory study examining three brain regions instead of only one as published so far. In all, we examined post-mortem samples from 11 schizophrenia patients and eight normal subjects. We investigated gene expression of total NRG1 and isoforms I, II and III by real-time PCR in the prefrontal cortex (Brodmann areas 9 and 10) and right hippocampal tissue. For the genetic study, we genotyped the …

Gene isoformMalemedicine.medical_specialtyGenotypeNeuregulin-1HippocampusGene ExpressionPrefrontal CortexHippocampal formationHippocampusPolymorphism Single Nucleotide03 medical and health sciences0302 clinical medicineInternal medicinemental disordersGenetic variationGene expressionmedicineHumansProtein IsoformsNeuregulin 1Prefrontal cortexAllelesBiological Psychiatry030304 developmental biologyAged0303 health sciencesbiologyReverse Transcriptase Polymerase Chain ReactionBrainmedicine.disease030227 psychiatryPsychiatry and Mental healthEndocrinologyHaplotypesSchizophreniabiology.proteinSchizophreniaFemalePsychologyNeuroscience030217 neurology & neurosurgeryWorld Journal of Biological Psychiatry
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Allelic age of the USH2A c.2299delG mutation

2010

24 p., figuras y bibliografía

Gene isoformUsher syndromePopulationc.2299delGSingle-nucleotide polymorphismBiologyPolymorphism Single NucleotideArticleLinkage DisequilibriumWhite PeopleExonUSH2Aotorhinolaryngologic diseasesGeneticsmedicineHaplotypeHumansAlleleeducationGeneAllelesPhylogenyGenetics (clinical)GeneticsExtracellular Matrix Proteinseducation.field_of_studyHaplotypemedicine.diseaseHaplotypesMutationDatingUsher Syndromes
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Development and implementation of high-throughput SNP genotyping in barley

2009

Abstract Background High density genetic maps of plants have, nearly without exception, made use of marker datasets containing missing or questionable genotype calls derived from a variety of genic and non-genic or anonymous markers, and been presented as a single linear order of genetic loci for each linkage group. The consequences of missing or erroneous data include falsely separated markers, expansion of cM distances and incorrect marker order. These imperfections are amplified in consensus maps and problematic when fine resolution is critical including comparative genome analyses and map-based cloning. Here we provide a new paradigm, a high-density consensus genetic map of barley based…

Genetic Markers0106 biological sciencesGenotypelcsh:QH426-470Genetic Linkagelcsh:BiotechnologyPopulationSingle-nucleotide polymorphismBiologyPolymorphism Single Nucleotide01 natural sciences03 medical and health sciencesGene mappinglcsh:TP248.13-248.65Research articleGeneticseducationAlleles030304 developmental biology2. Zero hungerGenetics0303 health scienceseducation.field_of_studyfood and beveragesHordeumSNP genotypingMinor allele frequencylcsh:GeneticsGenetic TechniquesGenetic distanceGenetic markerDoubled haploidy010606 plant biology & botanyBiotechnology
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Forensic animal DNA typing: Allele nomenclature and standardization of 14 feline STR markers

2014

Since the domestic cat (Felis catus) has become one of the most popular pets and owners usually develop a close relationship to their cats, it is necessary to take traces of cats into account for forensic casework. For this purpose feline short tandem (STR) repeat markers have been investigated in several earlier studies, but no detailed description of sequence data, allelic variations or a repeat-based nomenclature is available. The aim of the study was to provide a suggestion for the allele nomenclature of 14 cat STR markers according to the recommendations of the International Society for Forensic Genetics (ISFG) for human DNA typing and to present a standardized system for a secure DNA …

Genetic MarkersGeneticsBase SequenceSTR multiplex systemElectrophoresis CapillaryDNABiologyPolymerase Chain ReactionPathology and Forensic Medicinechemistry.chemical_compoundVariable number tandem repeatchemistryTerminology as TopicCatsGeneticsAnimalsTypingAlleleRepeated sequenceNomenclatureAllele frequencyAllelesDNADNA PrimersMicrosatellite RepeatsForensic Science International: Genetics
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