Search results for "ATLAS"

showing 10 items of 652 documents

The Making of the New European Wind Atlas - Part 2: production and evaluation

2020

This is the second of two papers that document the creation of the New European Wind Atlas (NEWA). In Part 1, we described the sensitivity experiments and accompanying evaluation done to arrive at the final mesoscale model setup used to produce the mesoscale wind atlas. In this paper, Part 2, we document how we made the final wind atlas product, covering both the production of the mesoscale climatology generated with the Weather Research and Forecasting (WRF) model and the microscale climatology generated with the Wind Atlas Analysis and Applications Program (WAsP). The paper includes a detailed description of the technical and practical aspects that went into running the mesoscale simulati…

010504 meteorology & atmospheric sciencesMeteorology020209 energyMesoscale meteorologyTerrainParameterization02 engineering and technology01 natural sciencesWind speedWind speed0202 electrical engineering electronic engineering information engineeringWind atlasData flow modelSurface wind0105 earth and related environmental sciences:Enginyeria agroalimentària::Ciències de la terra i de la vida::Climatologia i meteorologia [Àrees temàtiques de la UPC]lcsh:QE1-996.5Física atmosféricalcsh:GeologyWeather Research and Forecasting ModelEnvironmental scienceNew European Wind AtlasSimulacio per ordinadorComputational methods in engineeringDownscalingModel
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The making of the New European Wind Atlas - Part 1: Model sensitivity

2020

This is the first of two papers that document the creation of the New European Wind Atlas (NEWA). It describes the sensitivity analysis and evaluation procedures that formed the basis for choosing the final setup of the mesoscale model simulations of the wind atlas. The suitable combination of model setup and parameterizations, bound by practical constraints, was found for simulating the climatology of the wind field at turbine-relevant heights with the Weather Research and Forecasting (WRF) model. Initial WRF model sensitivity experiments compared the wind climate generated by using two commonly used planetary boundary layer schemes and were carried out over several regions in Europe. They…

010504 meteorology & atmospheric sciencesMeteorologyPlanetary boundary layer010505 oceanography020209 energylcsh:QE1-996.5Mesoscale meteorologyFísica atmosférica02 engineering and technology01 natural sciences7. Clean energyWind speedlcsh:GeologyBoundary layerRoughness length/dk/atira/pure/sustainabledevelopmentgoals/climate_action13. Climate actionWeather Research and Forecasting ModelWind resource assessmentWind atlasSDG 13 - Climate Action0202 electrical engineering electronic engineering information engineeringEnvironmental science0105 earth and related environmental sciences
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Trilobites from the Red Fauna (latest Emsian, Devonian) of Hamar Laghdad, Morocco and their biodiversity

2018

36 pages; International audience; Trilobites are widespread in Early Devonian deposits of north Gondwana; some of the most emblematic ones were collected from the famous latest Emsian (Early Devonian) mudmound locality Hamar Laghdad in south-eastern Morocco. This locality is famous for its trilobites, especially for the conspicuous red-coloured remains of phacopid trilobites with often greenish eyes. Here, we present a taxonomic revision of the previously described trilobites from the so-called Red Fauna of Hamar Laghdad. We introduce the new taxa Harpes hamarlaghdadensis n. sp. and Morocops davidbrutoni n. sp. Phacopids dominate the trilobite assemblage from the Red Cliff at Hamar Laghdad …

010506 paleontologyFaunaBiodiversity10125 Paleontological Institute and Museum[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy010502 geochemistry & geophysics01 natural sciencesTafilaltDevoniandiversitytaxonomyPaleontology[SDV.BID.SPT] Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomyCliff14. Life underwaterEmsian0105 earth and related environmental sciencesgeography.geographical_feature_categorybiologyvariabilityPalaeontologyTrilobitaPaleontologybiology.organism_classificationTrilobite1911 PaleontologyGondwanaTaxonGeography560 Fossils & prehistoric lifeeastern Anti-Atlas[SDU.STU.PG] Sciences of the Universe [physics]/Earth Sciences/Paleontology[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/PaleontologyNeues Jahrbuch für Geologie und Paläontologie - Abhandlungen
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Les ammonites du Pliensbachien du jebel Bou Rharraf (Haut Atlas oriental, Maroc).

2011

60 pages; International audience; L'originalité des dépôts sédimentaires et des faunes d'ammonites du jebel Bou Rharraf repose sur la présence de faciès « Ammonitico Rosso », les plus occidentaux connus pour le Pliensbachien, une forte diversité des Phylloceratida (Phylloceras, Calaiceras, Zetoceras, Partschiceras et Juraphyllites) et une disparité morphologique importante chez les Galaticeras, Miltoceras et les Tauromeniceras. Si quelques formes, telles que Miltoceras taguendoufi et Mauretaniaceras elmii nov. gen., nov. sp. ont un cachet endémique très affirmé, les faunes du Pliensbachien du Haut Atlas oriental sont classiques pour la marge sud de la Téthys occidentale. Trois genres (Callo…

010506 paleontologyPaleontologyJurassique inférieur010502 geochemistry & geophysicsPliensbachien01 natural sciencesMarocBiostratigraphieSpace and Planetary ScienceAmmonites[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/Paleontology0105 earth and related environmental sciences[ SDU.STU.PG ] Sciences of the Universe [physics]/Earth Sciences/PaleontologyHaut AtlasPaléobiogéographie
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Interactions between ecological traits and host plant type explain distribution change in noctuid moths.

2009

The ecological traits of species determine how well a species can withstand threats to which it is exposed. If these predisposing traits can be identified, species that are most at risk of decline can be identified and an understanding of the processes behind the declines can be gained. We sought to determine how body size, specificity of larval host plant, overwintering stage, type of host plant, and the interactions of these traits are related to the distribution change in noctuid moths. We used data derived from the literature and analyzed the effects of traits both separately and simultaneously in the same model. When we analyzed the traits separately, it seemed the most important deter…

0106 biological sciencesEcology (disciplines)Distribution (economics)Body sizeMoths010603 evolutionary biology01 natural sciencesPlant Physiological PhenomenaAtlases as TopicSpecies SpecificityAnimalsBody SizeSymbiosisEcology Evolution Behavior and SystematicsOverwinteringFinlandPlant Physiological PhenomenaNature and Landscape ConservationDemographyAnalysis of VarianceExtinctionEcologybiologybusiness.industryEcology010604 marine biology & hydrobiologyfungifood and beveragesbiology.organism_classificationLarvaTraitNoctuidaesense organsbusinessConservation biology : the journal of the Society for Conservation Biology
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Krapina atlases suggest a high prevalence of anatomical variations in the first cervical vertebra of Neanderthals

2020

The first cervical vertebra, atlas, and its anatomical variants have been widely studied in Homo sapiens. However, in Neanderthals, the presence of anatomical variants of the atlas has been very little studied until very recently. Only the Neanderthal group from the El Sidrón site (Spain) has been analysed with regard to the anatomical variants of the atlas. A high prevalence of anatomical variants has been described in this sample, which points to low genetic diversity in this Neanderthal group. Even so, the high prevalence of anatomical variations detected in El Sidrón Neanderthal atlases needs to be confirmed by analysing more Neanderthal remains. In this context, we analysed the possibl…

0301 basic medicineAnatomical variantsHistologyNeanderthaleducationBiologyanatomical variants ; atlas ; Krapina ; NeanderthalNeanderthal03 medical and health sciences0302 clinical medicineAltlasbiology.animalCorrespondenceForamenAnimalsCervical AtlasAtlas archMolecular BiologyEcology Evolution Behavior and SystematicsNeanderthalsBiological Variation IndividualHigh prevalenceFossilsKrapinaCell BiologyAnatomyFirst cervical vertebraBiological EvolutionOriginal Papers030104 developmental biologyHomo sapiensAnatomy030217 neurology & neurosurgeryDevelopmental BiologyJournal of Anatomy
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Response to Letter to the Editor by Dr Rios and Dr Cardoso

2020

We have read with interest the letter of Dr Rios and Dr Cardoso about our manuscript entitled “Krapina atlases suggest a high prevalence of anatomical variations in the first cervical vertebra of Neanderthals, ” by Palancar et al. (2020). Here, we respond to the issues raised in the Letter to the Editor by Dr Rios and Dr Cardoso

0301 basic medicineHistologyLetter to the editorLibrary scienceCell Biology03 medical and health sciences030104 developmental biology0302 clinical medicineKrapina Neandertals ; atlasPolitical scienceChristian ministryAnatomyMolecular Biology030217 neurology & neurosurgeryEcology Evolution Behavior and SystematicsDevelopmental Biology
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Analysis of low-correlated spatial gene expression patterns: A clustering approach in the mouse brain data hosted in the Allen Brain Atlas

2018

The Allen Brain Atlas (ABA) provides a similar gene expression dataset by genome-scale mapping of the C57BL/6J mouse brain. In this study, the authors describe a method to extract the spatial information of gene expression patterns across a set of 1047 genes. The genes were chosen from among the 4104 genes having the lowest Pearson correlation coefficient used to compare the expression patterns across voxels in a single hemisphere for available coronal and sagittal volumes. The set of genes analysed in this study is the one discarded in the article by Bohland et al. , which was considered to be of a lower consistency, not a reliable dataset. Following a normalisation task with a global and …

0301 basic medicineImage registrationGenomicsBiologycomputer.software_genre03 medical and health sciencessymbols.namesake0302 clinical medicineVoxelmedicineCluster analysisSpatial analysisSettore INF/01 - Informaticabusiness.industryBrain atlasPattern recognitionSagittal planePearson product-moment correlation coefficient030104 developmental biologymedicine.anatomical_structuresymbolsMorphometric similarity cluster analysis gene expression patternsComputer Vision and Pattern RecognitionArtificial intelligencebusinesscomputer030217 neurology & neurosurgerySoftware
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Somatic copy number alterations are associated with EGFR amplification and shortened survival in patients with primary glioblastoma.

2019

Glioblastoma (GBM) is the most common malignant primary tumor of the central nervous system. With no effective therapy, the prognosis for patients is terrible poor. It is highly heterogeneous and EGFR amplification is its most frequent molecular alteration. In this light, we aimed to examine the genetic heterogeneity of GBM and to correlate it with the clinical characteristics of the patients. For that purpose, we analyzed the status of EGFR and the somatic copy number alterations (CNAs) of a set of tumor suppressor genes and oncogenes. Thus, we found GBMs with high level of EGFR amplification, low level and with no EGFR amplification. Highly amplified tumors showed histological features of…

0301 basic medicineMaleCancer ResearchBiopsyL-amp GB EGFR-low amplified glioblastomamedicine.disease_causewt wildtypeMYBPC3 myosin-binding protein C0302 clinical medicineHIC1 hypermethylated in cancer 1Gene duplicationIn Situ Hybridization FluorescenceIDH2 isocitrate dehydrogenase 2MutationRB-pat RB signaling pathwayEGFRvIII epidermal growth factor receptor variant number IIIPAH phenylalanine hydroxylaseGBM glioblastoma IDH-wildtype (glioblastoma multiforme primary glioblastoma).ANOVA ANalysis Of VArianceN-amp GB EGFR-no amplified glioblastomaMiddle AgedCDKN2A cyclin-dependent kinase inhibitor 2Alcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogensPrognosisPrimary tumorImmunohistochemistryH-amp GB EGFR-high amplified glioblastomaErbB ReceptorsTKR-pat tyrosine-kinase receptors signaling pathway030220 oncology & carcinogenesisDisease ProgressionCDK6 cyclin-dependent kinase 6CDH1 Cadherin 1FemaleCREM cAMP response element modulatorIHC immunohistochemistryAdultOriginal articleDNA Copy Number VariationsCDKN1B cyclin-dependent kinase inhibitor 1BBiologyRARB retinoic acid receptor betaCNS central nervous systemlcsh:RC254-282IDH1 isocitrate dehydrogenase 1BCL2 B-cell cll/ lymphoma 2CNAs copy number algerationsWHO World Health Organization03 medical and health sciencesYoung Adultp53-pat p53 signaling pathwaymedicineBiomarkers TumorTMA tissue microarrayPTENHumansProtein kinase BPI3K/AKT/mTOR pathwaySurvival analysisAgedGenetic heterogeneityGene AmplificationGFAP glial fibrillary acidic proteinMLPA multiplex ligation-dependent probe amplificationmedicine.diseaseFISH fluorescence in situ hibridizationSurvival AnalysisCDKN2B cyclin-dependent kinase inhibitor 2BPTEN phosphatase and tensin homologEGFR epidermal growth factor receptorCNV-load load of copy number variations030104 developmental biologyMutationPARK2 parkinCancer researchbiology.proteinTCGA The Cancer Genome AtlasLARGE1 acetylglucosaminyltransferase-like protein 1GlioblastomaCHD7 Chromodomain Helicase DNA Binding Protein 7DAPI 4′6-diamidino-2-phenylindoleNeoplasia (New York, N.Y.)
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Clustering of low-correlated spatial gene expression patterns in the mouse brain in the Allen Brain Atlas

2018

In this paper, clustering techniques are applied to spatial gene expression patterns with a low genomic correlation between the sagittal and coronal projections. The data analysed here are hosted on an available public DB named ABA (Allen Brain Atlas). The results are compared to those obtained by Bohland et al. on the complementary dataset (high correlation values). We prove that, by analysing a reduced dataset,hence reducing the computational burden, we get the same accuracy in highlighting different neuroanatomical region.

0301 basic medicineSettore INF/01 - InformaticaComputer scienceBrain atlasComputer Science ApplicationGenomicsComputational biologySagittal planeCorrelation03 medical and health sciences030104 developmental biology0302 clinical medicinemedicine.anatomical_structureComputer Networks and CommunicationHardware and ArchitectureCoronal planeGene expressionmedicineComputer Vision and Pattern RecognitionElectrical and Electronic EngineeringCluster analysis030217 neurology & neurosurgery
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