Search results for "ATP hydrolysis"
showing 7 items of 17 documents
Human Inducible Hsp70: Structures, Dynamics, and Interdomain Communication from All-Atom Molecular Dynamics Simulations
2015
The 70 kDa human heat shock protein is a major molecular chaperone involved in de novo folding of proteins in vivo and refolding of proteins under stress conditions. Hsp70 is related to several "misfolding diseases" and other major pathologies, such as cancer, and is a target for new therapies. Hsp70 is comprised of two main domains: an N-terminal nucleotide binding domain (NBD) and a C-terminal substrate protein binding domain (SBD). The chaperone function of Hsp70 is based on an allosteric mechanism. Binding of ATP in NBD decreases the affinity of the substrate for SBD, and hydrolysis of ATP is promoted by binding of polypeptide segments in the SBD. No complete structure of human Hsp70 is…
Metabolic aspects of the rhythmogenesis inAplysia pacemaker neurons
1973
Completely isolatedAplysia pacemaker neurons were used to investigate mechanisms of endogenous electrical rhythmicity. This preparation allows the study of pure pacemaker activity free from synaptic, ephaptic and/or humoral influences from the surrounding cells. The effect of some substances quite different in their mode of biochemical action were tested: sodium iodoacetate, phloridzin, dinitrophenol, heavy water, and ouabain. Each of these substances suppressed the spontaneous spike activity without any marked depolarizing or hyperpolarizing effect. Spontaneous spike activity of the neurons silenced after addition of one of these substances reappeared after addition of glucose. The restori…
Role of ΔpH in the mechanism of zeaxanthin-dependent amplification of qE
1995
Abstract The influence of zeaxanthin on the high-energy-state fluorescence quenching (qE) and the pH dependence of the maximum chlorophyll fluorescence yield (Fm) was examined in spinach thylakoids. High contents of zeaxanthin were achieved using different pretreatments. A pronounced, zeaxanthin-dependent amplification of non-photochemical quenching (NPQ) was exclusively found in thylakoids containing zeaxanthin, synthesized in the dark via the buildup of an artificial ΔpH. These thylakoids also showed a significant quenching of chlorophyll fluorescence in the range pH 5.5–6.3, where no or only slight quenching was visible in zeaxanthin-free thylakoids. Thylakoids containing high amounts of…
Structural dynamics in F1ATPase during the first reaction cycle of ATP hydrolysis
1991
Abstract The velocity of ATP hydrolysis, catalyzed by purified F 1 ATPase from Micrococcus luteus , was decelerated on decreasing the temperature. At 13′C one reaction cycle is completed after 20 s. Hydrolysis was triggered upon rapid mixing of the enzyme with ATP. During the first reaction cycle, succeeding structural alterations of the F 1 ATPase were traced by time resolved X-ray scattering. The scattering spectra obtained from consecutive intervals of 1 s, revealed the F 1 ATPase to pass a conformational state exhibiting an expanded (6%) molecular shape. The expanded state was observed between 45% and 65% of the time required to complete the reaction cycle. This pointx out a conformatio…
Kti12, a PSTK-like tRNA dependent ATPase essential for tRNA modification by Elongator
2019
Abstract Posttranscriptional RNA modifications occur in all domains of life. Modifications of anticodon bases are of particular importance for ribosomal decoding and proteome homeostasis. The Elongator complex modifies uridines in the wobble position and is highly conserved in eukaryotes. Despite recent insights into Elongator's architecture, the structure and function of its regulatory factor Kti12 have remained elusive. Here, we present the crystal structure of Kti12′s nucleotide hydrolase domain trapped in a transition state of ATP hydrolysis. The structure reveals striking similarities to an O-phosphoseryl-tRNA kinase involved in the selenocysteine pathway. Both proteins employ similar …
Potential ATPase mimics by polyammonium macrocycles: Criteria for catalytic activity
1992
Abstract A series of polyammonium macrocycles, ranging in size from the 18-membered ring [18]aneN6 to the 36-membered [36]aneN12 were examined as potential ATPase mimics. The rates of hydrolysis of ATP were followed at pH 3.0 and 7.0 using 31P NMR and HPLC techniques. Stability constants as a function of degree of protonation, distribution curves for the ligands as a function of pH, and distribution curves for the mixed species of nucleotides, inorganic phosphate, and macrocycle were also determined. All of the macrocycles catalyzed the hydrolysis of ATP to some extent compared to noncatalyzed hydrolysis. A critical dependence on macrocyclic ring size was observed, with [21]aneN7 being the …
Intracellular acidosis in murine fibrosarcomas coincides with ATP depletion, hypoxia, and high levels of lactate and total Pi
1994
Bioenergetic and metabolic status of murine FSaII tumours were evaluated using 31P MRS, acid extracts ('global' techniques) and quantitative bioluminescence ('microregional' assay). Data obtained from s.c. tumours of varying sizes (44-600 mm3) have been correlated with the oxygenation status evaluated using O2-sensitive needle electrodes. beta-NTP/Pi and phosphocreatine (PCr)/Pi ratios derived from 31P MRS were positively correlated to the median tissue pO2 values. pH declined during growth with intracellular acidosis being evident in tumours > 350 mm3. Whereas lactic acid formation greatly contributed to this decline in small- and medium-sized tumours, ATP hydrolysis and slowing down of th…