Search results for "Ab initio calculations."

showing 10 items of 61 documents

Conformational investigation of alpha,beta-dehydropeptides. VIII. N-acetyl-alpha,beta-dehydroamino acid N'-methylamides: conformation and electron de…

2009

The Fourier transform infrared spectra are analyzed in the regions of Vs(N-H), amide I, amide II and Vs(C alpha = C beta) bands for a series of Ac-delta Xaa-NHMe, where delta Xaa = delta Ala, (Z)-delta Abu, (Z)-delta Leu, (Z)-delta Phe and delta Val, to determine the predominant solution conformation of these alpha,beta-dehydropeptide-related molecules and the electron distribution perturbation in their amide bonds. The measurements were performed in dichloromethane (DCM). To confirm and rationalize the assignments, the spectra of the respective series of saturated Ac-Xaa-NHMe, recorded in DCM, and the spectra of these two series of unsaturated and saturated compounds, recorded in acetonitr…

Protein ConformationαAb initioElectronsBiochemistrychemistry.chemical_compoundEndocrinologyDehydroalanineComputational chemistryAb initio quantum chemistry methodsamidic resonanceAmideSpectroscopy Fourier Transform InfraredMoleculePeptide bondC5 hydrogen bondC5 conformationFourier transform infrared spectroscopyamide bond lengthβ‐dehydroamino acidsHydrogen bondab initio calculationsdehydroalanineAmidesMolecular WeightCrystallographyFTIR spectroscopychemistryPeptidesΔ‐electron conjugationThe journal of peptide research : official journal of the American Peptide Society
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Current density maps, magnetizability, and nuclear magnetic shielding tensors of bis-heteropentalenes. II. Furo-furan Isomers

2004

Magnetic susceptibility and nuclear magnetic shielding at the nuclei of bis-heteropentalenes formed by two furan units ([2,3-b], [3,2-b], [3,4-b], and [3,4-c] isomers) have been computed by several approximated techniques and a large Gaussian basis set to achieve near Hartree–Fock estimates. Ab initio models of the ring currents induced by a magnetic field normal to the molecular plane were obtained for the three isomeric systems of higher symmetry, showing that the π electrons give rise to intense diamagnetic circulation. The π currents are responsible for enhanced magnetic anisotropy and strong out-of-plane proton deshielding. The theoretical findings are used to build up a “diatropicity …

ProtonAb initioMagnetic Susceptibility ; Current Density ; Nuclear Screening ; Isomerism ; HF Calculations ; Ab Initio Calculations ; Magnetic Fields ; Magnetic Anisotropy ; Organic CompoundsGeneral Physics and AstronomyHF CalculationsMagnetic SusceptibilityMolecular physicsFuro-furan Isomers; Magnetizability and Nuclear Magnetic ShieldingFuro-furan IsomersIsomerismAb initio quantum chemistry methodsMagnetizability and Nuclear Magnetic ShieldingPhysical and Theoretical Chemistry:FÍSICA::Química física [UNESCO]Condensed matter physicsOrganic CompoundsChemistryNuclear ScreeningMagnetic susceptibilityMagnetic AnisotropyMagnetic fieldUNESCO::FÍSICA::Química físicaMagnetic anisotropyMagnetic FieldsElectromagnetic shieldingDiamagnetismCurrent DensityAb Initio Calculations
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The molecular structure of N-hydroxyurea

1996

Ab initio calculations were performed on the tautomers and conformers of N-hydroxyurea using a 6-31G** basis set. The minimum-energy structures have been found and the importance of the intramolecular hydrogen bond as the stabilizing factor was pointed out. © 1996 John Wiley & Sons, Inc.

Settore CHIM/03 - Chimica Generale E Inorganicaab initio calculationsmolecular structureN-hydroxyurea
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Comparative Hybrid Hartree-Fock-DFT Calculations of WO2-Terminated Cubic WO3 as Well as SrTiO3, BaTiO3, PbTiO3 and CaTiO3 (001) Surfaces

2021

We greatly acknowledge the financial support via the ERAF Project No. 1.1.1.1/18/A/073. Calculations were performed using Latvian Super Cluster (LASC), located in the Center of Excellence at Institute of Solid State Physics, the University of Latvia, which is supported by European Union Horizon 2020 Framework Programme H2020-WIDESPREAD-01-2016-2017-Teaming Phase 2 under Grant Agreement No. 739508, project CAMART.

Surface (mathematics)ABO3 (001) surfacesMaterials scienceGeneral Chemical EngineeringPopulationHartree–Fock method02 engineering and technology01 natural sciences7. Clean energyMolecular physicshybrid exchange–correlation functionalsInorganic ChemistryCrystalWO<sub>3</sub>Ab initio quantum chemistry methodsWO30103 physical sciences:NATURAL SCIENCES:Physics [Research Subject Categories]General Materials ScienceeducationABO<sub>3</sub> (001) surfaces010302 applied physicseducation.field_of_studyCrystallography021001 nanoscience & nanotechnologyCondensed Matter PhysicsAb initio calculations; ABO<sub>3</sub> (001) surfaces; WO<sub>3</sub>; hybrid exchange–correlation functionalsChemical bondQD901-999Ab initio calculations0210 nano-technologyLayer (electronics)Crystals
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Simulating pump-probe photo-electron and absorption spectroscopy on the attosecond time-scale with time-dependent density-functional theory

2013

Molecular absorption and photoelectron spectra can be efficiently predicted with real-time time-dependent density functional theory. We show herein how these techniques can be easily extended to study time-resolved pump-probe experiments, in which a system response (absorption or electron emission) to a probe pulse is measured in an excited state. This simulation tool helps with the interpretation of fast-evolving attosecond time-resolved spectroscopic experiments, in which electronic motion must be followed at its natural timescale. We show how the extra degrees of freedom (pump-pulse duration, intensity, frequency, and time delay), which are absent in a conventional steady-state experimen…

Time-resolved spectroscopyTime FactorsAbsorption spectroscopyAtomic Physics (physics.atom-ph)AttosecondAttosecond dynamicsFOS: Physical sciencesPump probesingle-molecule studies01 natural sciencestime-resolved spectroscopySettore FIS/03 - Fisica Della MateriaPhysics - Atomic PhysicsAb initio quantum chemistry methodsPhysics - Chemical Physics0103 physical sciencesPhysics - Atomic and Molecular ClustersLaser spectroscopyPhysical and Theoretical Chemistry010306 general physicsSpectroscopyPhysicsChemical Physics (physics.chem-ph)010304 chemical physicsEuropean researchab initio calculationsPhotoelectron SpectroscopySingle-molecule studiesattosecond dynamicsTime-dependent density functional theoryAtomic and Molecular Physics and OpticsPhysics - Plasma PhysicsPlasma Physics (physics.plasm-ph)X-Ray Absorption Spectroscopylaser spectroscopyQuantum TheoryAtomic physicsTime-resolved spectroscopyAtomic and Molecular Clusters (physics.atm-clus)
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DLPNO-CCSD(T) scaled methods for the accurate treatment of large supramolecular complexes

2017

In this work, we present scaled variants of the DLPNO-CCSD(T) method, dubbed as (LS)DLPNO-CCSD(T) and (NS)DLPNO-CCSD(T), to obtain accurate interaction energies in supramolecular complexes governed by noncovalent interactions. The novel scaled schemes are based on the linear combination of the DLPNO-CCSD(T) correlation energies calculated with the standard (LoosePNO and NormalPNO) and modified (Loose2PNO and Normal2PNO) DLPNO-CCSD(T) accuracy levels. The scaled DLPNO-CCSD(T) variants provide nearly TightPNO accuracy, which is essential for the quantification of weak noncovalent interactions, with a noticeable saving in computational cost. Importantly, the accuracy of the proposed schemes is…

chemistry.chemical_classificationFullerene010304 chemical physicsDispersion forcesNoncovalent interactionsSupramolecular chemistryGeneral Chemistry010402 general chemistry01 natural sciencesLondon dispersion force0104 chemical sciencesComputational MathematicsCrystallographychemistryComputational chemistryAb initio quantum chemistry methods0103 physical sciencesNon-covalent interactionsDLPNO-CCSD(T) scaled methodsDonor–acceptor supramolecular complexesAb initio calculationsQuímica FísicaLinear combination
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Geometrical and conformational preferences of the 9‐fluorenylmethoxycarbonyl‐amino moiety

2004

Structural parameters, originating from x-ray crystallographic data, have been compiled for 13 derivatives of amino acids, peptides and related compounds, which contain a total of 14 Fmoc-NH- moieties. For these moieties, molecular geometries and conformations--described by the omegao, theta1, theta2 and theta3' torsion angles--were analysed and compared with the corresponding parameters for the Z-NH- and Boc-NH-moieties (290 and 553, respectively). To gain a deeper insight into the conformational features of the Fmoc-NH- moiety, ab initio free molecule calculations were performed for fully relaxed minima. Also the potential energy surface as a function of the torsion angles (theta3', theta…

crystal structureStereochemistryAb initioMolecular ConformationCrystal structureCrystallography X-RayBiochemistryBoc amino protectionStructure-Activity RelationshipfluoreneStructural BiologyAb initio quantum chemistry methodsDrug DiscoveryMoleculeMoietyurethane geometryFmoc amino protectionAmino AcidsMolecular BiologyPharmacologyFluorenesMolecular StructureChemistryHydrogen bondab initio calculationsOrganic ChemistryHydrogen BondingGeneral MedicineZ amino protectionMolecular geometryPotential energy surfaceMolecular MedicineCrystallizationPeptidesN‐terminally protected peptidesJournal of Peptide Science
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DFT modelling of oxygen adsorption on the Ag-doped LaMnO3 (001) surface

2019

This study was partly financed by the State Education Development Agency of the Republic of Latvia via the Latvian State Scholarship (A.A.) and Latvia-Ukraine Project (Grant LV-UA/2018/2 to E.K.). The work of T.I. is performed under the state assignment of IGM SB RAS. Also, this research was partly supported by the Ministry of Education and Science of the Republic of Kazakhstan in the framework of the scientific and technology Program BR05236795 ‘‘Development of Hydrogen Energy Technologies in the Republic of Kazakhstan’’. The authors thank M. Sokolov for technical assistance and valuable suggestions.

inorganic chemicalsMaterials scienceAg catalystchemistry.chemical_element02 engineering and technologySolid oxide fuel cells01 natural sciences7. Clean energyElectric chargeOxygenlaw.inventionoxygen adsorptionAdsorptionAb initio quantum chemistry methodslaw0103 physical sciences:NATURAL SCIENCES:Physics [Research Subject Categories]Materials ChemistryRedistribution (chemistry)Electrical and Electronic EngineeringLaMnO3010302 applied physicsab initio calculationsDoping021001 nanoscience & nanotechnologyCondensed Matter PhysicsCathodeElectronic Optical and Magnetic MaterialschemistryPhysical chemistryDensity functional theory0210 nano-technologyJournal of Electronic Materials
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Applications of Quantum Chemistry in Spectroscopy: Molecules, Complexes of Van der Waals, trapped Molecules

2009

I described in this memory my activities as a researcher at Tomsk well before 2003, in succession to the State University of Tomsk in the Faculty of Physics, Institute of Physics of Siberia, and the Institute of 'Atmospheric Optics, in France since then, mostly at the University of Bourgogne (ICB), but also at the University of Lille I (PhLAM) and the University of Marne-la-Vallée (LCT). Part of my work has been dedicated to the evaluation by calculating ab initio of rovibrational constants for quasi-spherical molecules. The centrifugal distortion constants and the dipole moment of the molecule SO2F2 were calculated to validate the tensor theory and interpreter the spectrum. I twas shown th…

photophysics and photochemistry of molecules and molecular systemsSpectroscopie moléculairemolecular modelingab initio calculationsmodélisation moléculaireMolecular spectroscopyphotophysique et photochimie de molécules et de systémes molèculairescalculs ab initio[PHYS] Physics [physics]
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Crystal field and magnetism with Wannier functions: Rare-earth doped aluminum garnets

2015

Using the recently developed method we calculate the crystal field parameters in yttrium and lutetium aluminum garnets doped with seven trivalent Kramers rare-earth ions. We then insert calculated parameters into the atomic-like Hamiltonian taking into account the electron-electron, spin-orbit and Zeeman interactions and determine the multiplet splitting by the crystal field as well as magnetic $\hat{g}$ tensors. We compare calculated results with available experimental data.

rare earthsWannier functionZeeman effectStrongly Correlated Electrons (cond-mat.str-el)Condensed matter physicsMagnetismab initio calculationsFOS: Physical scienceschemistry.chemical_elementGeneral ChemistryYttriumLutetiumIongarnetssymbols.namesakeCondensed Matter::Materials ScienceCondensed Matter - Strongly Correlated ElectronschemistryGeochemistry and PetrologysymbolsCondensed Matter::Strongly Correlated ElectronsHamiltonian (quantum mechanics)crystal fieldMultiplet
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