Search results for "Abiogenesis"

Modern diversification of the amino acid repertoire driven by oxygen

2017

All extant life employs the same 20 amino acids for protein biosynthesis. Studies on the number of amino acids necessary to produce a foldable and catalytically active polypeptide have shown that a basis set of 7-13 amino acids is sufficient to build major structural elements of modern proteins. Hence, the reasons for the evolutionary selection of the current 20 amino acids out of a much larger available pool have remained elusive. Here, we have analyzed the quantum chemistry of all proteinogenic and various prebiotic amino acids. We find that the energetic HOMO-LUMO gap, a correlate of chemical reactivity, becomes incrementally closer in modern amino acids, reaching the level of specialize…

Molecular Diversity Required for the Formation of Autocatalytic Sets

2019

Systems chemistry deals with the design and study of complex chemical systems. However, such systems are often difficult to investigate experimentally. We provide an example of how theoretical and simulation-based studies can provide useful insights into the properties and dynamics of complex chemical systems, in particular of autocatalytic sets. We investigate the issue of the required molecular diversity for autocatalytic sets to exist in random polymer libraries. Given a fixed probability that an arbitrary polymer catalyzes the formation of other polymers, we calculate this required molecular diversity theoretically for two particular models of chemical reaction systems, and then verify …

Crystals and the debates on the nature, recognition and origin of life

2020

Prebiotic Evolution and the Origin of Life: Chemical and Biochemical Aspects

1988

Evolution, as the term is used here, signifies any development or change adapting to the environment. Chemical evolution connotes changes of chemical substances, it thus signifies that changes occur fundamentally in the molecules. Frequently “chemical evolution” is used synonymously for “abiotic” or “prebiotic formation” of organic molecules in a cosmic system, usually on the prebiotic (or primitive) Earth. It is then assumed that the organic molecules were formed from the constituents of the primitive atmosphere, hydrosphere, and — in part — lithospere.

Origin of Life, Theories Of

2017

Modern advances in biology, geology, chemistry, and astronomy have allowed us to elaborate models and hypotheses on the origin of life on Earth within the framework of the evolutionary theory. About four billion years ago, a rich inventory of organic compounds accumulated on the planet, as a product of volcanic, atmospheric, and cosmic chemistry. As chemical systems became increasingly more complex, a critical point was reached with the appearance of self-replicative polymers. This marks the possibility of optimizing abiotic systems by natural selection and historical contingency, which were added to the determinism of abiotic chemistry. A landmark of the origin of life was the articulation…

Out of fuzzy chemistry: from prebiotic chemistry to metabolic networks

2012

The origin of life on Earth was a chemical affair. So how did primitive biochemical systems originate from geochemical and cosmochemical processes on the young planet? Contemporary research into the origins of life subscribes to the Darwinian principle of material causes operating in an evolutionary context, as advocated by A. I. Oparin and J. B. S. Haldane in the 1920s. In its simplest form (e.g., a bacterial cell) extant biological complexity relies on the functional integration of metabolic networks and replicative genomes inside a lipid boundary. Different research programmes have explored the prebiotic plausibility of each of these autocatalytic subsystems and combinations thereof: sel…

ChemInform Abstract: Out of Fuzzy Chemistry: From Prebiotic Chemistry to Metabolic Networks

2012

The origin of life on Earth was a chemical affair. So how did primitive biochemical systems originate from geochemical and cosmochemical processes on the young planet? Contemporary research into the origins of life subscribes to the Darwinian principle of material causes operating in an evolutionary context, as advocated by A. I. Oparin and J. B. S. Haldane in the 1920s. In its simplest form (e.g., a bacterial cell) extant biological complexity relies on the functional integration of metabolic networks and replicative genomes inside a lipid boundary. Different research programmes have explored the prebiotic plausibility of each of these autocatalytic subsystems and combinations thereof: sel…

An astrobiological perspective on Meridiani Planum

2005

Sedimentary rocks exposed in the Meridiani Planum region of Mars record aqueous and eolian deposition in ancient dune and interdune playa-like environments that were arid, acidic, and oxidizing. On Earth, microbial populations have repeatedly adapted to low pH and both episodic and chronic water limitation, suggesting that, to a first approximation, the Meridiani plain may have been habitable during at least part of the interval when deposition and early diagenesis took place. On the other hand, the environmental conditions inferred for Meridiani deposition would have posed a challenge for prebiotic chemical reactions thought to have played a role in the origin of life on Earth. Orbital obs…

The Origin of Life: More Questions Than Answers

1988

AbstractMore than 30 years of experimentation on the origin of life in the fields of chemical and molecular evolution have led to a better perception of the immensity of the problem of the origin of life on Earth rather than to its solution. At present all discussions on principal theories and experiments in the field either end in stalemate or in a confession of ignorance. New lines of thinking and experimentation must be tried. The continued exploration of our solar system, especially a better knowledge of Mars and Venus, of comets and carbonaceous meteorites may also lead to a better understanding of the prebiotic environment on Earth and will thus help us to design more appropriate preb…

Molecular Biomineralization: Toward an Understanding of the Biogenic Origin of Polymetallic Nodules, Seamount Crusts, and Hydrothermal Vents

2011

Polymetallic nodules and crusts, hydrothermal vents from the Deep Sea are economically interesting, since they contain alloying components, e.g., manganese or cobalt, that are used in the production of special steels; in addition, they contain rare metals applied for plasma screens, for magnets in hard disks, or in hybrid car motors. While hydrothermal vents can regenerate in weeks, polymetallic nodules and seamount crusts grow slowly. Even though the geochemical basis for the growth of the nodules and crusts has been well studied, the contribution of microorganisms to the formation of these minerals remained obscure. Recent HR-SEM (high-resolution scanning electron microscopy) analyses of …