Search results for "Adaptive"

showing 10 items of 792 documents

Genome Sequencing and Transcriptome Analysis Reveal Recent Species-Specific Gene Duplications in the Plastic Gilthead Sea Bream (Sparus aurata)

2019

Gilthead sea bream is an economically important fish species that is remarkably well-adapted to farming and changing environments. Understanding the genomic basis of this plasticity will serve to orientate domestication and selective breeding toward more robust and efficient fish. To address this goal, a draft genome assembly was reconstructed combining short- and long-read high-throughput sequencing with genetic linkage maps. The assembled unmasked genome spans 1.24 Gb of an expected 1.59 Gb genome size with 932 scaffolds (~732 Mb) anchored to 24 chromosomes that are available as a karyotype browser at www.nutrigroup-iats.org/seabreamdb. Homology-based functional annotation, supported by R…

0106 biological sciencesTransposable element010504 meteorology & atmospheric scienceslcsh:QH1-199.5Adaptive plasticitytransposon mobilizationOcean EngineeringRetrotransposonAquatic ScienceBiologylcsh:General. Including nature conservation geographical distributionOceanography01 natural sciencesGenomeimmune responsegilthead sea breamGene family14. Life underwaterresponse to stimuluslcsh:ScienceGeneGenome size0105 earth and related environmental sciencesWater Science and TechnologySyntenyGlobal and Planetary Changegene duplications010604 marine biology & hydrobiologyphylogenomicsEvolutionary biologylcsh:QMobilomeFrontiers in Marine Science
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The Importance of Engaging Local People in Landscape Management – Experiences from an EU Project

2018

“Bull by the Horns” -project initiated landscape management and promoted biodiversity associated with diminishing High Nature Value farmland habitats in Finland. A specific focus was on grazed semi-natural grasslands and wood-pastures which are collectively referred to as traditional rural biotopes (TRBs). Collaboration among project workers, non-farming landowners, and cattle owners reintroduced grazing to abandoned pastures, and management was financed through agri-environmental payments. Using adaptive co-management principles, the project enabled collective definition of integrated site-specific management objectives. A better understanding of contemporary challenges and opportunities t…

0106 biological sciencesValue (ethics)maisemanhoitohyvät käytännötmedia_common.quotation_subjectta1172High Nature Value farmland0211 other engineering and technologiesadaptive governanceagri-environment scheme02 engineering and technologylandscape management010603 evolutionary biology01 natural sciencesympäristöohjelmatlcsh:HD101-1395.5yhteistoimintahankesuunnittelusitouttaminenEnvironmental planningta119Nature and Landscape Conservationmedia_commonEcologyadaptive co-managementCorporate governanceprojectification021107 urban & regional planningPaymentprojektitlcsh:Land usehallintoCollaborative managementBusinessManagement by objectivescollaborative planningpaikalliset toimijatLandscape Online
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Variation and covariation in infectivity, virulence and immunodepression in the host-parasite association Gammarus pulex-Pomphorhynchus laevis.

2009

Parasites often manipulate host immunity for their own benefit, either by exacerbating or suppressing the immune response and this may directly affect the expression of parasite virulence. However, genetic variation in immunodepression, which is a prerequisite to its evolution, and the relationship between immunodepression and virulence, have rarely been studied. Here, we investigated the variation among sibships of the acanthocephalan parasite, Pomphorhynchus laevis , in infecting and in immunodepressing its amphipod host, Gammarus pulex . We also assessed the covariation between infectivity, parasite-induced immune depression and host mortality (parasite virulence). We found that infecti…

0106 biological sciencesVirulencephenoloxidaseparasite-induced immunodepression[ SDV.IMM.IA ] Life Sciences [q-bio]/Immunology/Adaptive immunology010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyMicrobiologyAcanthocephalaHost-Parasite Interactions03 medical and health sciencesImmune systemRiversImmunityResearch articlesImmune Tolerance[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisParasite hostingAnimalsAmphipoda030304 developmental biologyGeneral Environmental ScienceInfectivity0303 health sciences[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyGeneral Immunology and MicrobiologybiologycovariationHost (biology)Monophenol MonooxygenaseGeneral Medicinebiology.organism_classificationSurvival Analysis3. Good healthacanthocephalanvirulenceGammarus pulex[SDV.IMM.IA]Life Sciences [q-bio]/Immunology/Adaptive immunologyImmunologyimmune defencesPomphorhynchus laevisFrance[SDE.BE]Environmental Sciences/Biodiversity and EcologyGeneral Agricultural and Biological Sciences[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Immunity and Virulence in Bird-Parasite Interactions.

2010

8 pages; International audience; The interaction between hosts and parasites is characterized by the evolution of reciproca adaptations aiming at reducing the cost of infection (from the host point of view) and to optimize host exploitation (from the parasite point of view). Within this co-evolutionary scenario, the immune system takes a central role. The immune system has evolved to fight off parasitic attacks. However, immune defences cannot be deployed without costs which set a limit to the protective effect of immunity. Moreover, immune defences impose strong selection pressures on the parasite and can favour the evolution of more virulent pathogen strains. In this article, we will disc…

0106 biological sciences[ SDV.MP.PAR ] Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyVirulenceBiology[ SDV.IMM.IA ] Life Sciences [q-bio]/Immunology/Adaptive immunology010603 evolutionary biology01 natural sciencesimmune response03 medical and health sciencesImmune systemImmunityImmunopathology[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisParasite hostingimmunopathology[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyPathogenCoevolution030304 developmental biology0303 health sciences[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyHost (biology)biochemical phenomena metabolism and nutritioninfectionvirulence[SDV.IMM.IA]Life Sciences [q-bio]/Immunology/Adaptive immunologyEvolutionary biologyImmunologybacteriaAnimal Science and Zoology[SDE.BE]Environmental Sciences/Biodiversity and Ecology[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/SymbiosisCoevolution
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Towards sustainable and multifunctional agriculture in farmland landscapes: Lessons from the integrative approach of a French LTSER platform

2018

International audience; Agriculture is currently facing unprecedented challenges: ensuring food, fiber and energy production in the face of global change, maintaining the economic performance of farmers and preserving natural resources such as biodiversity and associated key ecosystem services for sustainable agriculture. Addressing these challenges requires innovative landscape scale farming systems that account for changing economic and environmental targets. These novel agricultural systems need to be recognized, accepted and promoted by all stakeholders, including local residents, and supported by public policies. Agroecosystems should be considered as socio-ecological systems and alter…

0106 biological sciencesagroecologyEnvironmental Engineering[SHS.INFO]Humanities and Social Sciences/Library and information sciencesParticipatory action researchadaptive governance[SDV.BID]Life Sciences [q-bio]/Biodiversitysocio-ecological system010603 evolutionary biology01 natural sciencesstakeholders12. Responsible consumptionEcosystem servicesfood-web[SDV.EE.ECO]Life Sciences [q-bio]/Ecology environment/Ecosystems11. SustainabilitySustainable agricultureCitizen scienceEnvironmental ChemistryWaste Management and DisposalAgroecologyEnvironmental planningComputingMilieux_MISCELLANEOUS2. Zero hunger[INFO.INFO-DB]Computer Science [cs]/Databases [cs.DB][SHS.STAT]Humanities and Social Sciences/Methods and statisticsbusiness.industry[SDE.IE]Environmental Sciences/Environmental Engineering04 agricultural and veterinary sciences[SHS.GEO]Humanities and Social Sciences/Geography15. Life on landPollutionNatural resource[INFO.INFO-MO]Computer Science [cs]/Modeling and Simulation6. Clean water13. Climate actionAgriculture040103 agronomy & agriculture0401 agriculture forestry and fisheriesSocio-ecological systemltser[SDE.BE]Environmental Sciences/Biodiversity and Ecologybusiness[SHS.HIST]Humanities and Social Sciences/History
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Environmental Modelling of Forest Vegetation Zones as A Support Tool for Sustainable Management of Central European Spruce Forests

2018

Abstract The impact of climate change on forest ecosystems may manifest itself by a shift in forest vegetation zones in the landscape northward and into higher elevations. Studies of climate change-induced vegetation zone shifts in forest ecosystems have been relatively rare in the context of European temperate zone (apart from Alpine regions). The presented paper outlines the results of a biogeographic model of climatic conditions in forest vegetation zones applied in the Central European landscape. The objective of the study is a prediction of future silvicultural conditions for the Norway spruce (Picea abies L. Karst.), which is one of the principal tree species within European forests. …

0106 biological sciencesbiogeographic modelEnvironmental modelling010504 meteorology & atmospheric sciencesEcologyAgroforestryforest vegetation zonesEcology (disciplines)regional scenario of changes in climatic conditionsManagement Monitoring Policy and Law01 natural sciencesGeographySustainable managementForest vegetationAdaptive managementQH540-549.5010606 plant biology & botany0105 earth and related environmental sciencesNature and Landscape ConservationJournal of Landscape Ecology(Czech Republic)
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Rapid induction of immune density-dependent prophylaxis in adult social insects.

2009

The innate immune system provides defence against parasites and pathogens. This defence comes at a cost, suggesting that immune function should exhibit plasticity in response to variation in environmental threats. Density-dependent prophylaxis (DDP) has been demonstrated mostly in phase-polyphenic insects, where larval group size determines levels of immune function in either adults or later larval instars. Social insects exhibit extreme sociality, but DDP has been suggested to be absent from these ecologically dominant taxa. Here we show that adult bumble-bee workers ( Bombus terrestris ) exhibit rapid plasticity in their immune function in response to social context. These results sugges…

0106 biological sciencesdensity-dependent prophylaxisZoology[ SDV.IMM.IA ] Life Sciences [q-bio]/Immunology/Adaptive immunology010603 evolutionary biology01 natural sciences03 medical and health sciencesImmune system[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisAnimalsinnate immunitySociality030304 developmental biologyPopulation Density[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyEvolutionary Biology0303 health sciencesLarvaInnate immune systembiologyEcologyfungiAge FactorsAdult insectBeessocialitybiology.organism_classificationAdaptation PhysiologicalAgricultural and Biological Sciences (miscellaneous)Immunity InnateBombus[SDV.IMM.IA]Life Sciences [q-bio]/Immunology/Adaptive immunologyDensity dependentBombus terrestrisInstar[SDE.BE]Environmental Sciences/Biodiversity and EcologyGeneral Agricultural and Biological Sciences[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Resource availability and competition shape the evolution of survival and growth ability in a bacterial community

2013

Resource availability is one of the main factors determining the ecological dynamics of populations or species. Fluctuations in resource availability can increase or decrease the intensity of resource competition. Resource availability and competition can also cause evolutionary changes in life-history traits. We studied how community structure and resource fluctuations affect the evolution of fitness related traits using a two-species bacterial model system. Replicated populations of Serratia marcescens (copiotroph) and Novosophingobium capsulatum (oligotroph) were reared alone or together in environments with intergenerational, pulsed resource renewal. The comparison of ancestral and evol…

0106 biological sciencesecological nichesBACTERIAL BIOFILMSResource (biology)media_common.quotation_subjectScienceAdaptation BiologicalBiologyco-evolutionEnvironment010603 evolutionary biology01 natural sciencesCompetition (biology)Bacterial evolution03 medical and health sciencesSpecies SpecificityAdaptive radiationCopiotrophSerratia marcescens030304 developmental biologymedia_commonEcological niche0303 health sciencesMultidisciplinaryEcologyMicrobiotaQCommunity structureRInterspecific competitionbiology.organism_classificationBiological EvolutionSurvival AnalysisSphingomonadaceaeSerratia marcescens1181 Ecology evolutionary biologyLinear ModelsMedicineMicrobial Interactionsta1181competitionResearch ArticlePLOS ONE
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Variation in parasite resistance of Arctic charr, Salvelinus alpinus, between and within sympatric morphs

2021

Abstract Genetic variation in resistance against parasite infections is a predominant feature in host–parasite systems. However, mechanisms maintaining genetic polymorphism in resistance in natural host populations are generally poorly known. We explored whether differences in natural infection pressure between resource‐based morphs of Arctic charr (Salvelinus alpinus) have resulted in differentiation in resistance profiles. We experimentally exposed offspring of two morphs from Lake Þingvallavatn (Iceland), the pelagic planktivorous charr (“murta”) and the large benthivorous charr (“kuðungableikja”), to their common parasite, eye fluke Diplostomum baeri, infecting the eye humor. We found t…

0106 biological sciencesgenetic structuresZoologyparasitismiBiology010603 evolutionary biology01 natural sciencesParasite loadnieriätrematode03 medical and health sciencesloisetAdaptive radiationGenetic variationParasite hostingmuuntelu (biologia)breeding colorationEcology Evolution Behavior and SystematicsResearch ArticlesQH540-549.5030304 developmental biologyNature and Landscape ConservationSalvelinusOriginal Research0303 health sciencesResistance (ecology)freshwater fish ecotypeEcologyhost–parasite interactionimumadothost– parasite interactionbiology.organism_classificationgeneettinen muunteluresistenssiimmunogenesspeciationSympatric speciationSexual selectionadaptive radiationEcology and Evolution
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Adaptive radiation in the fossil record: a case study among Jurassic ammonoids

2013

15 pages; International audience; Evolutionary radiations have been extensively studied especially in the fossil record and in the context of postcrisis recoveries. The concept of adaptive radiation that emerges from this very broad topic explicitly involves the effect of adaptation driven by ecological opportunity and is considered to be of the foremost importance. It is essential to be able to detect adaptive radiation because it points up factors that predispose a clade to radiate. Adaptive radiation has received much attention in recent decades based mostly on studies dealing with recent clades, but data from the fossil record are still scarce. This study begins to fill this gap with th…

0106 biological sciencesmacroevolution010506 paleontologyFossil RecordModern evolutionary synthesisPaleontologyContext (language use)JurassicBiologyMacroevolution010603 evolutionary biology01 natural sciencesPaleontologyammonoidsAdaptive radiationAdaptation[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/Paleontologyadaptive radiationCladeEcology Evolution Behavior and Systematics[ SDU.STU.PG ] Sciences of the Universe [physics]/Earth Sciences/Paleontology0105 earth and related environmental sciencesPalaeontology
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