Search results for "Affinity"

showing 10 items of 313 documents

Enantioseparation of phenotiazines by affinity electrokinetic chromatography using human serum albumin as chiral selector

2007

Nowadays, there is a special interest within the pharmaceutical laboratories to develop single enantiomer formulations and consequently a need for analytical methods to determine the enantiomeric purity of drugs. The present paper deals with the enantiomeric separation of promethazine and trimeprazine enantiomers by affinity electrokinetic chromatography (AEKC)-partial filling technique using human serum albumin (HSA) as chiral selector. A multivariate optimization of the most critical experimental variables in enantioresolution, running pH, HSA concentration and plug length, is carried out to obtain enantioresolution of promethazine and trimeprazine. The estimated maximum and optimum resol…

ChromatographybiologyResolution (mass spectrometry)TrimeprazineSerum albuminHuman serum albuminBiochemistryAnalytical ChemistryPromethazinechemistry.chemical_compoundAffinity chromatographychemistryPhenothiazinebiology.proteinmedicineEnvironmental ChemistryEnantiomerSpectroscopymedicine.drugAnalytica Chimica Acta
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Affinity chromatographic separation of plant lactate dehydrogenase

1978

Abstract Lactate dehydrogenase from potato tubers was purified by the use of several standard purification procedures as well as by affinity chromatography on C

Chromatographyfungifood and beveragesmacromolecular substancesPlant ScienceGeneral MedicineHorticultureBiologySolanum tuberosumbiology.organism_classificationBiochemistryChromatographic separationchemistry.chemical_compoundAffinity chromatographychemistryBiochemistryLactate dehydrogenaseMolecular BiologySolanaceaePhytochemistry
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Optical studies on the specific interaction of dipyridamole with alpha 1-acid glycoprotein (orosomucoid).

1982

Abstract The interaction of dipyridamole with α1-acid glycoprotein was investigated by circular dichroism and ultraviolet absorbance measurements as well as by equilibrium dialysis experiments. Dipyridamole is bound to the protein via one site of extremely high affinity and by at least one site of considerably lower affinity. Only the association of dipyridamole with the high affinity site produces typical extrinsic Cotton effects. As a result of experimental observations it is concluded that the high affinity site is located in a hydrophobic protein structure of the glycoprotein.

Circular dichroismChemical PhenomenaStereochemistryProtein ConformationPharmaceutical ScienceOrosomucoidIn Vitro TechniquesProtein structuremedicineHumansPharmacologychemistry.chemical_classificationbiologyChemistry PhysicalCircular DichroismTryptophanDipyridamoleOrosomucoidUltraviolet absorbanceDipyridamoleLower affinitychemistryα1 acid glycoproteinbiology.proteinTyrosineSpectrophotometry UltravioletGlycoproteinDialysismedicine.drugProtein BindingThe Journal of pharmacy and pharmacology
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Cloning, purification, and nucleotide-binding traits of the catalytic subunit A of the V1VO ATPase from Aedes albopictus.

2007

The Asian tiger mosquito, Aedes albopictus, is commonly infected by the gregarine parasite Ascogregarina taiwanensis, which develops extracellularly in the midgut of infected larvae. The intracellular trophozoites are usually confined within a parasitophorous vacuole, whose acidification is generated and controlled by the V(1)V(O) ATPase. This proton pump is driven by ATP hydrolysis, catalyzed inside the major subunit A. The subunit A encoding gene of the Aedes albopictus V(1)V(O) ATPase was cloned in pET9d1-His(3) and the recombinant protein, expressed in the Escherichia coli Rosetta 2 (DE3) strain, purified by immobilized metal affinity- and ion-exchange chromatography. The purified prote…

Circular dichroismVacuolar Proton-Translocating ATPasesATPaseProtein subunitGene ExpressionGenes InsectBiologyIn Vitro Techniquesmedicine.disease_causelaw.inventionAdenosine TriphosphateATP hydrolysislawAedesCatalytic DomainmedicineAnimalsNucleotideCloning MolecularEscherichia coliDNA Primerschemistry.chemical_classificationPhotoaffinity labelingBase SequenceMolecular biologyProtein SubunitsSpectrometry FluorescenceBiochemistrychemistrySpectrometry Mass Matrix-Assisted Laser Desorption-Ionizationbiology.proteinRecombinant DNAInsect ProteinsBiotechnologyProtein expression and purification
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Strategies for improving production and purification of a recombinant protein: rP30 of Toxoplasma gondii expressed in the yeast Schizosaccharomyces p…

2007

Abstract Many problems concerned with the production and the purification of recombinant proteins must be addressed prior to launching an industrial production process. Among these problems, attention is focused on low-level expression that complicates the purification step and can jeopardise the process. The expression of a membrane protein, rP30, of Toxoplasma gondii in the yeast Schizosaccharomyces pombe led to a secretion of only 0.5 μg ml−1. In order to obtain a sufficient quantity for biochemical characterization and evaluation in vitro diagnostic test development, strategies for both production and purification had to be optimized. First, the influence of four nitrogen sources (three…

Clinical BiochemistryIon chromatographyProtozoan ProteinsAntigens ProtozoanRaw materialBiochemistryChromatography AffinityAnalytical Chemistrylaw.inventionAffinity chromatographylawSchizosaccharomycesYeast extractAnimalsBiomassChromatographybiologyChemistryCell BiologyGeneral Medicinebiology.organism_classificationYeastRecombinant ProteinsBiochemistrySchizosaccharomyces pombeFermentationRecombinant DNAFermentationToxoplasmaJournal of chromatography. B, Analytical technologies in the biomedical and life sciences
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Chiral separation of oxprenolol by affinity electrokinetic chromatography-partial filling technique using human serum albumin as chiral selector

2005

The intrinsic characteristics of capillary electrophoresis have made this technique a powerful tool in the chiral separation field. The present paper deals with the enantiomeric separation of oxprenolol enantiomers by affinity electrokinetic chromatography-partial filling technique using human serum albumin (HSA) as chiral selector. Several experimental conditions and variables affecting the separation such as pH, HSA concentration and plug length, background electrolyte concentration, temperature and voltage were studied. Baseline separation of oxprenolol enantiomers was obtained in less than 8 min under the following selected conditions: electrophoretic buffer composed of 50 mM Tris-(hydr…

Clinical BiochemistrySerum albuminAnalytical chemistryPharmaceutical ScienceChromatography AffinityAnalytical ChemistryElectrokinetic phenomenaCapillary electrophoresisAffinity chromatographyDrug DiscoverymedicineHumansSerum AlbuminSpectroscopyChromatographybiologyChemistryOxprenololStereoisomerismHuman serum albuminElectrophoresisOxprenololbiology.proteinEnantiomercirculatory and respiratory physiologymedicine.drugJournal of Pharmaceutical and Biomedical Analysis
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Identification and isolation of the primary aggregation factor from the cell membrane of the sponge Geodia cydonium

1985

The primary aggregation factor (pAF) of sponge cells is a glycoprotein that is firmly associated with the cell membrane. Polyspecific antibodies (anti-GM) prepared from sera raised against membranes of cells from the siliceous sponge Geodia cydonium were found to inhibit initial aggregation of homologous cells. The inhibition of aggregation, caused by anti-GM was neutralized by pAF. The pAF had been successfully solubilized and enriched by affinity chromatography, gel filtration and density gradient centrifugation, if checked by polyacrylamide gel electrophoresis in the presence of urea. The Mr of the native pAF was approximately 40 000 as estimated by gel filtration; under denaturing condi…

Clinical BiochemistrySize-exclusion chromatographyBiologyCell membraneSpecies SpecificityAffinity chromatographymedicineAnimalsGeodiaMolecular BiologyPolyacrylamide gel electrophoresisCell AggregationGlycoproteinschemistry.chemical_classificationDifferential centrifugationCell MembraneMembrane ProteinsLectinCell BiologyGeneral Medicinebiology.organism_classificationMolecular biologyPoriferamedicine.anatomical_structurechemistryBiochemistrybiology.proteinlipids (amino acids peptides and proteins)GlycoproteinCell Adhesion MoleculesMolecular and Cellular Biochemistry
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SMART: Unique splitting-while-merging framework for gene clustering

2014

© 2014 Fa et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Successful clustering algorithms are highly dependent on parameter settings. The clustering performance degrades significantly unless parameters are properly set, and yet, it is difficult to set these parameters a priori. To address this issue, in this paper, we propose a unique splitting-while-merging clustering framework, named "splitting merging awareness tactics" (SMART), which does not require any a priori knowledge of either the number …

Clustering algorithmsMicroarrayslcsh:MedicineGene ExpressionBioinformaticscomputer.software_genreCell SignalingData MiningCluster Analysislcsh:ScienceFinite mixture modelOligonucleotide Array Sequence AnalysisPhysicsMultidisciplinarySMART frameworkConstrained clusteringCompetitive learning modelBioassays and Physiological AnalysisMultigene FamilyCanopy clustering algorithmEngineering and TechnologyData miningInformation TechnologyGenomic Signal ProcessingAlgorithmsResearch ArticleSignal TransductionComputer and Information SciencesFuzzy clusteringCorrelation clusteringResearch and Analysis MethodsClusteringMolecular GeneticsCURE data clustering algorithmGeneticsGene RegulationCluster analysista113Gene Expression Profilinglcsh:RBiology and Life SciencesComputational BiologyCell BiologyDetermining the number of clusters in a data setComputingMethodologies_PATTERNRECOGNITIONSplitting-merging awareness tactics (SMART)Signal ProcessingAffinity propagationlcsh:QGene expressionClustering frameworkcomputer
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Structural clustering of millions of molecular graphs

2014

We propose an algorithm for clustering very large molecular graph databases according to scaffolds (i.e., large structural overlaps) that are common between cluster members. Our approach first partitions the original dataset into several smaller datasets using a greedy clustering approach named APreClus based on dynamic seed clustering. APreClus is an online and instance incremental clustering algorithm delaying the final cluster assignment of an instance until one of the so-called pending clusters the instance belongs to has reached significant size and is converted to a fixed cluster. Once a cluster is fixed, APreClus recalculates the cluster centers, which are used as representatives for…

Clustering high-dimensional dataFuzzy clusteringTheoretical computer sciencek-medoidsComputer scienceSingle-linkage clusteringCorrelation clusteringConstrained clusteringcomputer.software_genreComplete-linkage clusteringGraphHierarchical clusteringComputingMethodologies_PATTERNRECOGNITIONData stream clusteringCURE data clustering algorithmCanopy clustering algorithmFLAME clusteringAffinity propagationData miningCluster analysiscomputerk-medians clusteringClustering coefficientProceedings of the 29th Annual ACM Symposium on Applied Computing
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Evaluation of Structural and Temporal Properties of Ego Networks for Data Availability in DOSNs

2017

The large diffusion of Online Social Networks (OSNs) has influenced the way people interact with each other. OSNs present several drawbacks, one of the most important is the problem of privacy disclosures. Distributed Online Social Networks (DOSNs) have been proposed as a valid alternative solution to solve this problem. DOSNs are Online Social Networks implemented on a distributed platform, such as a P2P system or a mobile network. However, the decentralization of the control presents several challenges, one of the main ones is guaranteeing data availability without relying on a central server. To this aim, users’ data allocation strategies have to be defined and this requires the knowledg…

Computer Networks and CommunicationsComputer scienceCommunity detection; Data availability; DOSN; P2P; Social networks; Temporal affinity; Software; Information Systems; Hardware and Architecture; Computer Networks and CommunicationsControl (management)Information System02 engineering and technologySocial networksField (computer science)Task (project management)Order (exchange)0202 electrical engineering electronic engineering information engineeringDOSNSocial networkStructure (mathematical logic)P2PCommunity detectionSocial networkbusiness.industry020206 networking & telecommunicationsData scienceData availabilityData availabilityHardware and ArchitectureCellular network020201 artificial intelligence & image processingTemporal affinitybusinessSoftwareInformation SystemsComputer networkMobile Networks and Applications
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