Search results for "Aka"
showing 10 items of 2351 documents
Mitochondrial heteroplasmy in an avian hybrid form (Passer italiae: Aves, Passeriformes)
2019
Mitochondrial heteroplasmy is the result from biparental transmission of mitochondrial DNA (mtDNA) to the offspring. In such rare cases, maternal and paternal mtDNA is present in the same individual. Though recent studies suggested that mtDNA heteroplasmy might be more common than previously anticipated, that phenomenon is still poorly documented and was mostly detected in case studies on hybrid populations. The Italian sparrow, Passer italiae is a homoploid hybrid form that occurs all across the Italian Peninsula mostly under strict absence of either of its parent species, the house sparrow (P. domesticus) and the Spanish sparrow (P. hispaniolensis). In this study, we document a new case o…
When phenotypes fail to illuminate underlying genetic processes in fish and fisheries science
2019
Abstract Advances in genetic and genomic technologies have become widely available and have potential to provide novel insights into fish biology and fisheries science. In the present overview, we explore cases for which genomic analyses have proven instrumental in the rejection of hypotheses that have been well-motivated based on phenotypic and ecological properties of individuals and populations. We focus on study systems for which information derived using genomic tools contradicts conclusions drawn from traditional fisheries science methodologies and assumptions. We further illustrate the non-intuitive interplay of genomics and ecology in Atlantic salmon (Salmo salar L.) owing to the re…
Species’ ecological functionality alters the outcome of fish stocking success predicted by a food-web model
2018
Fish stocking is used worldwide in conservation and management, but its effects on food-web dynamics and ecosystem stability are poorly known. To better understand these effects and predict the outcomes of stocking, we used an empirically validated network model of a well-studied lake ecosystem. We simulate two stocking scenarios with two native fish species valuable for fishing. In the first scenario, we stock planktivorous fish (whitefish) larvae in the ecosystem. This leads to a 1% increase in adult whitefish biomasses and decreases the biomasses of the top predator (perch). In the second scenario, we also stock perch larvae in the ecosystem. This decreases the planktivorous whitefish an…
Effects of predation pressure and resource use on morphological divergence in omnivorous prey fish
2013
Background. Body shape is one of the most variable traits of organisms and responds to a broad array of local selective forces. In freshwater fish, divergent body shapes within single species have been repeatedly observed along the littoral-pelagic axes of lakes, where the structural complexity of near shore habitats provides a more diverse set of resources compared to the open-water zones. It remains poorly understood whether similar resource-driven polymorphism occurs among lakes that vary in structural complexity and predation pressure, and whether this variation is heritable. Here, we analyzed body shape in four populations of omnivorous roach (Rutilus rutilus) inhabiting shallow lakes.…
Synthesis of habitat restoration impacts on young-of-the-year salmonids in boreal rivers
2019
River restoration offers the potential to enhance biological integrity, often measured as fish population changes. We used a meta-analytical approach to synthesize density responses to in-stream habitat restoration by young-of-the year (YOY) brown trout and Atlantic salmon in 28 rivers (overall 32 restoration projects) in Finland. We also examined which local and watershed-scale factors most influenced restoration success. Finally, we conducted an expert survey to obtain an independent estimate of a sufficient density enhancement for restoration to be considered successful. Despite strong context-dependency, habitat restoration had an overall positive effect on YOY salmonid density. When co…
Factors controlling plankton community production, export flux, and particulate matter stoichiometry in the coastal upwelling system off Peru
2020
Eastern boundary upwelling systems (EBUS) are among the most productive marine ecosystems on Earth. The production of organic material is fueled by upwelling of nutrient-rich deep waters and high incident light at the sea surface. However, biotic and abiotic factors can modify surface production and related biogeochemical processes. Determining these factors is important because EBUS are considered hotspots of climate change, and reliable predictions of their future functioning requires understanding of the mechanisms driving the biogeochemical cycles therein. In this field experiment, we used in situ mesocosms as tools to improve our mechanistic understanding of processes controlling organ…
Occurrence of Two-Year Cyclicity, “Saw-Blade Fluctuation”, in Vendace Populations in Finland
2021
The tendency towards two-year cyclicity is considered typical of many Fennoscandian vendace populations, especially in fluctuation of recruitment, based on time series of individual lakes. We used two robust indicators to identify and quantify two-year cycles in vendace population proxy time series at different life-stages — spawning stock biomass (SB), density of newly hatched larvae (LD) and recruitment (REC) — from 22 Finnish lakes. Then we applied Fisher’s meta-analytical test to assess the adequacy of the evidence to support the hypothesis that vendace population dynam-ics include two-year cyclicity. The results supported this hypothesis for RECbut not for SB or LD. Yet, the indicators…
Calibrating Expert Assessments Using Hierarchical Gaussian Process Models
2020
Expert assessments are routinely used to inform management and other decision making. However, often these assessments contain considerable biases and uncertainties for which reason they should be calibrated if possible. Moreover, coherently combining multiple expert assessments into one estimate poses a long-standing problem in statistics since modeling expert knowledge is often difficult. Here, we present a hierarchical Bayesian model for expert calibration in a task of estimating a continuous univariate parameter. The model allows experts' biases to vary as a function of the true value of the parameter and according to the expert's background. We follow the fully Bayesian approach (the s…
Eliciting expert knowledge to inform stock status for data-limited stock assessments
2019
Data-limited fisheries are a major challenge for stock assessment analysts, as many traditional data-rich models cannot be implemented. Approaches based on stock reduction analysis offer simple ways to handle low data availability, but are particularly sensitive to assumptions on relative stock status (i.e., current biomass compared to unperturbed biomass). For the vast majority of data-limited stocks, stock status is unmeasured. The present study presents a method to elicit expert knowledge to inform stock status and a novel, user-friendly on-line application for expert elicitation. Expert opinions are compared to stock status derived from data-rich models. Here, it is evaluated how expert…
Vertical sediment migrations of dominant midge species in subtropical lakes with implications for bioassessment
2018
Abstract Propsilocerus akamusi (Diptera: Chironomidae) is a dominant species in numerous eutrophic lakes and they could burrow into deep sediments (>30 cm) during summer months. However, common-used grab samplers are efficient in collecting surface-dwelling species (