Search results for "Animal Shell"

showing 10 items of 30 documents

Climate variation during the Holocene influenced the skeletal properties of Chamelea gallina shells in the North Adriatic Sea (Italy)

2021

Understanding how marine taxa will respond to near-future climate changes is one of the main challenges for management of coastal ecosystem services. Ecological studies that investigate relationships between the environment and shell properties of commercially important marine species are commonly restricted to latitudinal gradients or small-scale laboratory experiments. This paper aimed to explore the variations in shell features and growth of the edible bivalve Chamelea gallina from the Holocene sedimentary succession to present-day thanatocoenosis of the Po Plain-Adriatic Sea system (Italy). Comparing the Holocene sub-fossil record to modern thanatocoenoses allowed obtaining an insight o…

BiomineralizationAtmospheric ScienceRecrystallization (geology)010504 meteorology & atmospheric sciencesPhysiologyOceans and Sea01 natural sciencesAnimal ShellX-Ray DiffractionSpectroscopy Fourier Transform InfraredHoloceneClimatologySedimentary GeologyMineralsMultidisciplinaryQuaternary PeriodbiologyGeographyFossilsQREukaryotaFossilGeologyMineralogyDiagenesisOceanographyItalyTaphonomyPhysical SciencesMedicineChamelea gallina[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/PaleontologyPorosityGeologyResearch Article010506 paleontologyBivalvesScienceClimate ChangeOceans and SeasMaterials ScienceMaterial PropertiesClimate changeengineering.materialCalcium CarbonateCalcification PhysiologicAnimal ShellsAnimals14. Life underwaterPaleoclimatologyEcosystem0105 earth and related environmental sciencesPetrologyHolocene EpochAnimalAragoniteRadiometric DatingOrganismsBiology and Life SciencesPaleontologyGeologic TimeMolluscsbiology.organism_classificationInvertebratesBivalviaSea surface temperatureAragonite13. Climate actionengineeringEarth SciencesCenozoic EraSedimentary rockSedimentPaleobiologyPhysiological ProcessesZoologyPloS One
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The shell organic matrix of the crossed lamellar queen conch shell (Strombus gigas)

2014

10 pages; International audience; In molluscs, the shell organic matrix comprises a large set of biomineral-occluded proteins, glycoproteins and polysaccharides that are secreted by the calcifying mantle epithelium, and are supposed to display several functions related to the synthesis of the shell. In the present paper, we have characterized biochemically the shell matrix associated to the crossed-lamellar structure of the giant queen conch Strombus gigas. The acid-soluble (ASM) and acid-insoluble (AIM) matrices represent an extremely minor fraction of the shell. Both are constituted of polydisperse and of few discrete proteins among which three fractions, obtained by preparative SDS-PAGE …

BiomineralizationPhysiologyGastropodaCarbohydratesMineralogyMannose010402 general chemistry01 natural sciencesBiochemistryCalcium CarbonateConch03 medical and health sciencesMatrix (mathematics)chemistry.chemical_compoundAnimal ShellsShellAnimalsMonosaccharide[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsMantle (mollusc)Molecular BiologyGlycoproteins030304 developmental biologychemistry.chemical_classification0303 health sciencesbiologyProteinsCrossed-lamellarImmunogold labelling[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/Biomaterialsbiology.organism_classificationCalcifying matrix0104 chemical sciencesCrystallographyStrombuschemistryMolluscCrystallizationGlycoproteinComparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology
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The shell matrix of the european thorny oyster, Spondylus gaederopus: microstructural and molecular characterization.

2020

17 pages; International audience; Molluscs, the largest marine phylum, display extraordinary shell diversity and sophisticated biomineral architectures. However, mineral-associated biomolecules involved in biomineralization are still poorly characterised.We report the first comprehensive structural and biomolecular study of Spondylus gaederopus, a pectinoid bivalve with a peculiar shell texture. Used since prehistoric times, this is the best-known shell of Europe’s cultural heritage. We find that Spondylus microstructure is very poor in mineral-bound organics, which are mostly intercrystalline and concentrated at the interface between structural layers.Using high-resolution liquid chromatog…

BiomineralizationProteomicsProteomeEvolution[SDV.BBM.BS] Life Sciences [q-bio]/Biochemistry Molecular Biology/Structural Biology [q-bio.BM]Shell (structure)Proteomics03 medical and health sciencesCalcification PhysiologicAnimal ShellsStructural BiologyAnimals14. Life underwater030304 developmental biologyMinerals0303 health sciencesbiology[SDV.BBM.BS]Life Sciences [q-bio]/Biochemistry Molecular Biology/Structural Biology [q-bio.BM]PhylumChemistry030302 biochemistry & molecular biologybiology.organism_classificationOstreidaeBiomineralization; Evolution; Liquid chromatography-tandem mass spectrometry; Proteomics; Shell biochemistryCharacterization (materials science)[SDV.BA.ZI]Life Sciences [q-bio]/Animal biology/Invertebrate ZoologySpondylusEvolutionary biologyLiquid chromatography-tandem mass spectrometryProteomeShell biochemistrySpondylus gaederopus[SDV.BA.ZI] Life Sciences [q-bio]/Animal biology/Invertebrate ZoologyBiomineralization
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Shell proteome of rhynchonelliform brachiopods.

2015

7 pages; International audience; Brachiopods are a phylum of marine invertebrates that have an external bivalved shell to protect their living tissues. With few exceptions, this biomineralized structure is composed of calcite, mixed together with a minor organic fraction, comprising secreted proteins that become occluded in the shell structure, once formed. This organic matrix is thought to display several functions, in particular, to control mineral deposition and to regulate crystallite shapes. Thus, identifying the primary structure of matrix proteins is a prerequisite for generating bioinspired materials with tailored properties. In this study, we employed a proteomic approach to identi…

BiomineralizationProteomicsProteomeShell (structure)BrachiopodsBiologyMatrix (biology)ProteomicsCalcium CarbonatePaleontologychemistry.chemical_compoundCalcification PhysiologicAnimal ShellsStructural Biology[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]ShellAnimals14. Life underwater[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsCalciteMineralsPhylumMarine invertebratesExtracellular matrix[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/BiomaterialsInvertebrateschemistryEvolutionary biology[ SDV.BBM.GTP ] Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]ProteomePeptidesBiomineralization
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The formation and mineralization of mollusk shell.

2011

27 pages; International audience; In the last years, the field of mollusk biomineralization has known a tremendous mutation. The most recent advances deal with the nanostructure of shell biominerals, and with the identification of several shell matrix proteins: on one hand, the complex hierarchical organization of shell biominerals has been deciphered in few models, like nacre. On the other hand, although proteins represent a minor shell component, they are the major macromolecules that control biocrystal synthesis. Until recently, the paradigm was to consider that this control occurs by two antagonist mechanisms: crystal nucleation and growth inhibition. Emerging models try to translate a …

General Immunology and MicrobiologyChemistryAnimal ShellsMolluscaBiophysicsShell matrixAnimals[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/Biomaterials[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/BiomaterialsMineralization (biology)General Biochemistry Genetics and Molecular BiologyWhole systemsBiomineralization
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The shell-forming proteome of Lottia gigantea reveals both deep conservations and lineage-specific novelties

2013

19 pages; International audience; Proteins that are occluded within the molluscan shell, the so-called shell matrix proteins (SMPs), are an assemblage of biomolecules attractive to study for several reasons. They increase the fracture resistance of the shell by several orders of magnitude, determine the polymorph of CaCO(3) deposited, and regulate crystal nucleation, growth initiation and termination. In addition, they are thought to control the shell microstructures. Understanding how these proteins have evolved is also likely to provide deep insight into events that supported the diversification and expansion of metazoan life during the Cambrian radiation 543 million years ago. Here, we p…

Glycoside Hydrolasesmedicine.medical_treatmentproteomeGastropodaMolecular Sequence DataBiologyBiochemistrymollusc shell matrix proteinsTranscriptomeCyclophilins03 medical and health sciencesPaleontologyLineage specificAnimal ShellsSequence Analysis ProteinTandem Mass Spectrometry[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]evolutionmedicineAnimalsAmino Acid Sequence14. Life underwaterMantle (mollusc)[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsMolecular BiologyCarbonic Anhydrases030304 developmental biologyExtracellular Matrix Proteins0303 health sciencesProteaseEpidermal Growth FactorSequence Homology Amino AcidLimpet030302 biochemistry & molecular biologyCell Biologybiology.organism_classification[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/BiomaterialsbiomineralizationPeptide FragmentsProtein Structure TertiaryPeroxidasesEvolutionary biology[ SDV.BBM.GTP ] Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]ProteomeLottia giganteaElectrophoresis Polyacrylamide GelmantleBiomineralization
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Ultrastructure of the Interlamellar Membranes of the Nacre of the Bivalve Pteria hirundo, Determined by Immunolabelling.

2015

The current model for the ultrastructure of the interlamellar membranes of molluscan nacre imply that they consist of a core of aligned chitin fibers surrounded on both sides by acidic proteins. This model was based on observations taken on previously demineralized shells, where the original structure had disappeared. Despite other earlier claims, no direct observations exist in which the different components can be unequivocally discriminated. We have applied different labeling protocols on non-demineralized nacreous shells of the bivalve Pteria. With this method, we have revealed the disposition and nature of the different fibers of the interlamellar membranes that can be observed on the …

In situPlateletsBivalvesScanning electron microscopeShell (structure)Mineralogylcsh:MedicineChitinMatrix (biology)chemistry.chemical_compoundChitinAnimal ShellsMembrane proteinsAnimalsFiberlcsh:ScienceNacreFluorescence microscopyMultidisciplinaryMicroscopy Confocallcsh:RfungiProteasesMolluscs[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/BiomaterialsBivalviaMembraneAragonitechemistryBiophysicsUltrastructureMicroscopy Electron Scanninglcsh:QResearch ArticlePloS one
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History of bioavailable lead and iron in the Greater North Sea and Iceland during the last millennium – A bivalve sclerochronological reconstruction

2014

We present the first annually resolved record of biologically available Pb and Fe in the Greater North Sea and Iceland during 1040-2004 AD based on shells of the long-lived marine bivalve Arctica islandica. The iron content in pre-industrial shells from the North Sea largely remained below the detection limit. Only since 1830, shell Fe levels rose gradually reflecting the combined effect of increased terrestrial runoff of iron-bearing sediments and eutrophication. Although the lead gasoline peak of the 20th century was well recorded by the shells, bivalves that lived during the medieval heyday of metallurgy showed four-fold higher shell Pb levels than modern specimens. Presumably, pre-indus…

IronIcelandAquatic ScienceHistory 18th CenturyOceanographyHistory 21st CenturyHistory 17th CenturyAnthropogenic pollutionAnimal ShellsPhytoplanktonBiomonitoringAnimalsNorth seaArctica islandicaHistory 15th CenturybiologyLead (sea ice)History 19th CenturyHistory 20th Centurybiology.organism_classificationPollutionHistory MedievalOceanographyLeadHistory 16th CenturyMetalsIron contentEnvironmental scienceNorth SeaEutrophicationWater Pollutants ChemicalEnvironmental MonitoringMarine Pollution Bulletin
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The degradation of intracrystalline mollusc shell proteins: a proteomics study of Spondylus gaederopus.

2021

Mollusc shells represent excellent systems for the preservation and retrieval of genuine biomolecules from archaeological or palaeontological samples. As a consequence, the post-mortem breakdown of intracrystalline mollusc shell proteins has been extensively investigated, particularly with regard to its potential use as a "molecular clock" for geochronological applications. But despite seventy years of ancient protein research, the fundamental aspects of diagenesis-induced changes to protein structures and sequences remain elusive. In this study we investigate the degradation of intracrystalline proteins by performing artificial degradation experiments on the shell of the thorny oyster, Spo…

Liquid chromatography-tandem mass spectrometry; Peptide bond hydrolysis; Protein degradation; TMT proteomics; Animal Shells; Animals; Bivalvia; Proteolysis; ProteomeProteomeQuantitative proteomicsBiophysicsPeptideProtein degradationProtein degradationProteomicsTandem mass tagBiochemistryAnalytical Chemistry03 medical and health sciences0302 clinical medicineProtein structurePeptide bond hydrolysisAnimal Shells[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]Mollusc shellPeptide bondAnimals[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsMolecular Biology030304 developmental biologychemistry.chemical_classification0303 health sciencesChemistryBivalviaTMT proteomicsLiquid chromatography-tandem mass spectrometryProteolysisBiophysics030217 neurology & neurosurgery
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Nanoscale assembly processes revealed in the nacroprismatic transition zone of Pinna nobilis mollusc shells

2015

Intricate biomineralization processes in molluscs engineer hierarchical structures with meso-, nano-, and atomic architectures that give the final composite material exceptional mechanical strength and optical iridescence on the macroscale. This multiscale biological assembly inspires new synthetic routes to complex materials. Our investigation of the prism-nacre interface reveals nanoscale details governing the onset of nacre formation using high-resolution scanning transmission electron microscopy. A wedge polishing technique provides unprecedented, large-area specimens required to span the entire interface. Within this region, we find a transition from nanofibrillar aggregation to irregu…

Materials scienceFOS: Physical sciencesGeneral Physics and AstronomyNanoparticleNanotechnologyArticleGeneral Biochemistry Genetics and Molecular BiologyAnimal ShellsNano-Scanning transmission electron microscopyAnimals[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsNacreNanoscopic scaleCondensed Matter - Materials ScienceMultidisciplinarybiologyMaterials Science (cond-mat.mtrl-sci)General Chemistry[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/Biomaterialsbiology.organism_classificationIridescenceMolluscaMicroscopy Electron ScanningNanoparticlesCrystallitePinna nobilisBiomineralizationNature Communications
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