Search results for "Animal"

showing 10 items of 22159 documents

A genomic map of climate adaptation in Mediterranean cattle breeds

2019

International audience; Domestic species such as cattle (Bos taurus taurus and B. t. indicus) represent attractive biological models to characterize the genetic basis of short term evolutionary response to climate pressure induced by their post-domestication history. Here, using newly generated dense SNP genotyping data, we assessed the structuring of genetic diversity of 21 autochtonous cattle breeds from the whole Mediterranean basin and performed genome-wide association analyses with covariables discriminating the different Mediterranean climate sub-types. This provided insights into both the demographic and adaptive histories of Mediterranean cattle. In particular, a detailed functional…

0106 biological sciences0301 basic medicineMediterranean climateCandidate genehttp://aims.fao.org/aos/agrovoc/c_24002Polymorphisme génétiqueAcclimatizationBreedingMediterraneanFacteur climatiquehttp://aims.fao.org/aos/agrovoc/c_11701 natural sciencesMediterranean Basinhttp://aims.fao.org/aos/agrovoc/c_4397http://aims.fao.org/aos/agrovoc/c_1081http://aims.fao.org/aos/agrovoc/c_3225Phylogeny2. Zero hungerGenomeEcology[SDV.BA]Life Sciences [q-bio]/Animal biologyhttp://aims.fao.org/aos/agrovoc/c_24031Chromosome MappingGenomicsSNP genotypingRace (animal)http://aims.fao.org/aos/agrovoc/c_3373http://aims.fao.org/aos/agrovoc/c_2080http://aims.fao.org/aos/agrovoc/c_4940http://aims.fao.org/aos/agrovoc/c_4026Génotypelocal adaptationBétailThermotoleranceBehavior and SystematicGenotypeP40 - Météorologie et climatologiehttp://aims.fao.org/aos/agrovoc/c_29554EvolutionIntrogressionSNPBiologyhttp://aims.fao.org/aos/agrovoc/c_259010603 evolutionary biology03 medical and health sciencescattle climate genetics local adaptation Mediterranean SNPhttp://aims.fao.org/aos/agrovoc/c_3081GeneticsAnimalsAdaptationhttp://aims.fao.org/aos/agrovoc/c_4697http://aims.fao.org/aos/agrovoc/c_8013climateEcology Evolution Behavior and SystematicsLocal adaptationGenetic diversityhttp://aims.fao.org/aos/agrovoc/c_2503Genetic Variation15. Life on landL10 - Génétique et amélioration des animauxClimat méditerranéen030104 developmental biologyGenetics PopulationEvolutionary biologycattleCarte génétiquehttp://aims.fao.org/aos/agrovoc/c_7273Adaptationgenetic
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The role of the Strait of Gibraltar in shaping the genetic structure of the Mediterranean Grenadier, Coryphaenoides mediterraneus, between the Atlant…

2017

24 pages, 4 figures, 4 tables, supplementary information https://dx.doi.org/10.1371/journal.pone.0174988.-- Data Availability: The mtDNA COI sequences can be accessed at BOLD systems through the sample ID: ME-9911; ME-11972; ME-13727; GLF011. New mtDNA COI sequences can be accessed at GenBank by the accession numbers KY345206 - KY345398. GenBank accession numbers for close related species of C. mediterraneus are: Coryphaenoides striaturus - KX656427.1, KX656428.1; Coryphaenoides murray - KX656411.1, KX656410.1; Coryphaenoides carapinus - KX656382.1, KX656381.1; Coryphaenoides brevibarbis - KX656377.1, KX656376.1, KX656375.1. An alignment in fasta with all the haplotypes and respective frequ…

0106 biological sciences0301 basic medicineMediterranean climateLife CyclesHeredityPopulation geneticslcsh:MedicineArtificial Gene Amplification and ExtensionBiochemistryPolymerase Chain Reaction01 natural sciencesBathyal zoneLarvaeMediterranean sealcsh:ScienceAtlantic OceanPrincipal Component Analysiseducation.field_of_studyMultidisciplinaryGeographyMitochondrial DNANucleic acidsGenetic MappingGenetic structureResearch ArticleFish ProteinsGene FlowForms of DNAPopulationZoologyBiologyResearch and Analysis MethodsModels Biological010603 evolutionary biologyElectron Transport Complex IVEvolution Molecular03 medical and health sciencesMediterranean SeaGeneticsAnimalsComputer Simulation14. Life underwaterMolecular Biology TechniqueseducationMolecular BiologyGibraltarEvolutionary BiologyPopulation Biologylcsh:RGenetic VariationBiology and Life SciencesPaleontologyBayes TheoremDNAGenetic divergenceGadiformes030104 developmental biologyHaplotypesGenetic LociEarth SciencesBiological dispersallcsh:QPaleogeneticsPopulation GeneticsMicrosatellite RepeatsDevelopmental BiologyPLoS ONE
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DNA Taxonomy Confirms the Identity of the Widely-Disjunct Mediterranean and Atlantic Populations of the Tufted Ghost Crab Ocypode cursor (Crustacea: …

2019

The distribution area of the tufted ghost crab Ocypode cursor includes two widely separate sub-areas, i.e. the tropical and subtropical Atlantic coasts of Africa and Macaronesia, and the central-eastern Mediterranean basin. The current disjunct distribution of the species is possibly the remnant of a previous wider and continuous distribution area that was fragmented during the Pleistocene, with the disappearance of the species from the temperate Atlantic Ocean and the western Mediterranean basin, and its survival in the warmer areas of the eastern Atlantic and the Mediterranean Sea. Such disjunction is thus compatible with an ancient isolation between the Mediterranean and Atlantic populat…

0106 biological sciences0301 basic medicineMediterranean climatedisjunct distribution allopatric populations phalanx dispersal mode sea warming tufted ghost crabOcypode cursorSpecies complexbiologyRange (biology)EcologySettore BIO/05 - ZoologiaDisjunct distributionbiology.organism_classification010603 evolutionary biology01 natural sciencesMediterranean Basin03 medical and health sciences030104 developmental biologyMediterranean seaAnimal Science and ZoologyGhost crabZoological Science
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Response to formal comment on Myhrvold (2016) submitted by Griebeler and Werner (2017)

2018

In his 2016 paper, Myhrvold criticized ours from 2014 on maximum growth rates (Gmax, maximum gain in body mass observed within a time unit throughout an individual’s ontogeny) and thermoregulation strategies (ectothermy, endothermy) of 17 dinosaurs. In our paper, we showed that Gmax values of similar-sized extant ectothermic and endothermic vertebrates overlap. This strongly questions a correct assignment of a thermoregulation strategy to a dinosaur only based on its Gmax and (adult) body mass (M). Contrary, Gmax separated similar-sized extant reptiles and birds (Sauropsida) and Gmax values of our studied dinosaurs were similar to those seen in extant similar-sized (if necessary scaled-up) …

0106 biological sciences0301 basic medicineMetabolic AnalysisPhysiologylcsh:MedicineAnimal Phylogenetics01 natural sciencesDinosaursBody TemperatureExtant taxonOrnithologyMaximum gainMedicine and Health SciencesGrowth rateSauropsidalcsh:ScienceArchosauriaData ManagementMammalsMultidisciplinarybiologyVertebrateEukaryotaPrehistoric AnimalsThermoregulationPhylogeneticsBioassays and Physiological AnalysisPhysiological ParametersEctothermVertebratesRegression AnalysisComputer and Information SciencesVertebrate PaleontologyZoologyResearch and Analysis Methods010603 evolutionary biologyFormal CommentBirds03 medical and health sciencesbiology.animalBasal Metabolic Rate MeasurementAnimalsAnimal PhysiologyEvolutionary SystematicsPaleozoologyTaxonomyEvolutionary Biologylcsh:ROrganismsBiology and Life SciencesPaleontologyReptilesbiology.organism_classificationBird Physiology030104 developmental biologyAmniotesEarth Scienceslcsh:QAllometryPaleobiologyZoologyPLoS ONE
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Dinosaur Metabolism and the Allometry of Maximum Growth Rate

2016

In his 2016 paper, Myhrvold criticized ours from 2014 on maximum growth rates (Gmax, maximum gain in body mass observed within a time unit throughout an individual’s ontogeny) and thermoregulation strategies (ectothermy, endothermy) of 17 dinosaurs. In our paper, we showed that Gmax values of similar-sized extant ectothermic and endothermic vertebrates overlap. This strongly questions a correct assignment of a thermoregulation strategy to a dinosaur only based on its Gmax and (adult) body mass (M). Contrary, Gmax separated similar-sized extant reptiles and birds (Sauropsida) and Gmax values of our studied dinosaurs were similar to those seen in extant similar-sized (if necessary scaled-up) …

0106 biological sciences0301 basic medicineMetabolic stateMetabolic AnalysisPhysiologylcsh:MedicineAnimal Phylogenetics01 natural sciencesBody TemperatureDinosaursMathematical and Statistical TechniquesExtant taxonMedicine and Health SciencesBody SizeGrowth ratelcsh:Sciencemedia_commonArchosauriaData ManagementMammalsMultidisciplinaryEcologyFossilsEukaryotaRegression analysisPrehistoric AnimalshumanitiesCurve FittingPhylogeneticsBioassays and Physiological AnalysisPhysiological ParametersEctothermPhysical SciencesVertebratesRegression AnalysisStatistics (Mathematics)Research ArticleComputer and Information Sciencesmedia_common.quotation_subjectVertebrate PaleontologyBiologyResearch and Analysis Methods010603 evolutionary biologyMarsupialsFormal CommentBirds03 medical and health sciencesBasal Metabolic Rate MeasurementAnimalsEvolutionary SystematicsStatistical MethodsPaleozoologyTaxonomyEvolutionary BiologyVariableslcsh:ROrganismsReptilesBiology and Life SciencesPaleontology030104 developmental biologyEvolutionary biologyBasal metabolic rateAmniotesEarth Scienceslcsh:QAllometryPaleobiologyEnergy MetabolismZoologyMathematical FunctionsMathematicsPLoS ONE
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Effect of antibiotic treatment and gamma-irradiation on cuticular hydrocarbon profiles and mate choice in tsetse flies (Glossina m. morsitans).

2018

Background Symbiotic microbes represent a driving force of evolutionary innovation by conferring novel ecological traits to their hosts. Many insects are associated with microbial symbionts that contribute to their host’s nutrition, digestion, detoxification, reproduction, immune homeostasis, and defense. In addition, recent studies suggest a microbial involvement in chemical communication and mating behavior, which can ultimately impact reproductive isolation and, hence, speciation. Here we investigated whether a disruption of the microbiota through antibiotic treatment or irradiation affects cuticular hydrocarbon profiles, and possibly mate choice behavior in the tsetse fly, Glossina mors…

0106 biological sciences0301 basic medicineMicrobiology (medical)MaleMate choiceTsetse Flieslcsh:QR1-502ZoologyGlossina morsitans01 natural sciencesMicrobiologylcsh:Microbiology03 medical and health sciencesSexual Behavior AnimalAnimalsMatingTsetseSymbiosisWigglesworthiaEndosymbiontbiologyObligateHost (biology)MicrobiotaResearchfungiTsetse flyReproductive isolationTetracyclinebiology.organism_classificationHydrocarbonsAnti-Bacterial Agents010602 entomology030104 developmental biologyMate choiceWigglesworthiaSex pheromoneInsect ProteinsAmpicillinFemaleCuticular hydrocarbonsBMC microbiology
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Benefits of immune protection versus immunopathology costs: a synthesis from cytokine KO models.

2017

5 pages; International audience; The inflammatory response can produce damage to host tissues and in several infectious diseases the most severe symptoms are due to immunopathology rather than a direct effect of pathogen multiplication. One hypothesis for the persistence of inflammatory damage posits that the benefits of protection towards infection outweigh the costs. We used data on knocked-out (KO) cytokine models [and the corresponding wild-type (WT) controls] to test this hypothesis. We computed differences in pathogen load and host survival between WT and KO and divided them by the WT values. Using this ratio provides an internal control for variation in pathogen species, host strain,…

0106 biological sciences0301 basic medicineMicrobiology (medical)medicine.medical_treatmentVirulenceInflammationImmunopathologyBiologyCommunicable Diseases010603 evolutionary biology01 natural sciencesMicrobiologyPersistence (computer science)Gene Knockout Techniques03 medical and health sciencesImmunopathologyGeneticsmedicine[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisAnimalsHumans[ SDV.IMM ] Life Sciences [q-bio]/ImmunologyMolecular BiologyPathogenCytokineEcology Evolution Behavior and SystematicsInflammationVirulenceHost (biology)Immune protectionHost survivalComputational BiologyPathogen loadDisease Models Animal030104 developmental biologyInfectious DiseasesCytokineHost-Pathogen InteractionsImmunologyCytokinesmedicine.symptom
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Evolutionary relationships between digeneans of the family Brachycladiidae Odhner, 1905 and their marine mammal hosts: A cophylogenetic study.

2016

Cophylogenetic studies examine the congruence between host and parasite phylogenies. There are few studies that quantify the relative contribution of coevolutionary events, i.e. duplication, loss, failure-to-diverge, host-switching and spreading in trophically-transmitted parasites at the marine realm. We addressed this issue in the Brachycladiidae, a cosmopolitan digenean family specific to marine mammals. We used, for the first time, distance-based and event-based methods to explicitly test the coevolutionary events that have shaped the current brachycladiid-marine mammal associations. Parasite phylogeny was constructed using mtDNA ND3 sequences of nine brachycladiid species, and host phy…

0106 biological sciences0301 basic medicineMitochondrial DNAAquatic OrganismsBiology010603 evolutionary biology01 natural sciencesDNA MitochondrialDigeneaHost-Parasite Interactions03 medical and health sciencesSpecies SpecificityPhylogeneticsAnimalsPhylogenyMammalsCytochrome bHost (biology)EcologySequence Analysis DNACytochromes bbiology.organism_classificationBiological Evolution030104 developmental biologyInfectious DiseasesTaxonEvolutionary biologyDelphinoideaParasitologyMammalTrematodaParasitology international
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Integrative taxonomy of root aphid parasitoids from the genus Paralipsis (Hymenoptera, Braconidae, Aphidiinae) with description of new species

2019

Species from the genus Paralipsis are obligatory endoparasitoids of root aphids in the Palaearctic. It is known that these species are broadly distributed, parasitizing various aphid hosts and showing great biological and ecological diversity. On the other hand, this group of endoparasitoids is understudied and was thought to be represented by a single species in Europe, viz., Paralipsisenervis (Nees). However, recent description of two new species indicated the possibility of cryptic speciation and recognition of additional Paralipsis species in Europe. In this research, Paralipsis specimens collected during the last 60 years from eight European countries, as well as one sample from Morocc…

0106 biological sciences0301 basic medicineMitochondrial DNAInsectaArthropodaParalipsis rugosa sp. n.HymenopteraMolecular phylogeny010603 evolutionary biology01 natural sciencesFaunistics & DistributionBraconidaeParalipsis brachycaudi sp. n.03 medical and health sciencesParalipsisbrachycaudi sp. n.Paralipsis rugosa sp. nParalipsislcsh:ZoologyAnimalialcsh:QL1-991Aphidiinaemolecular phylogenyEcology Evolution Behavior and SystematicsMolecular systematicsTaxonomyAphidbiologyCryptic speciationParalipsisrugosa sp. n.biology.organism_classificationHymenopteraEuropeIchneumonoidea030104 developmental biologyTaxonEvolutionary biologyMolecular phylogeneticsAnimal Science and ZoologyTaxonomy (biology)BraconidaeAphidiinaeResearch Article
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Analysis of heteroplasmy in bank voles inhabiting the Chernobyl exclusion zone : A commentary on Baker et al. (2017) "Elevated mitochondrial genome v…

2018

0106 biological sciences0301 basic medicineMitochondrial DNARodentmetsämyyräecological geneticsevoluutio010603 evolutionary biology01 natural sciences03 medical and health sciencesMolecular evolutionbiology.animalGeneticsExclusion zoneEcology Evolution Behavior and Systematicsbiologymolecular evolutionsäteilyPopulation ecologyEcological geneticsgeneettinen muunteluHeteroplasmypopulaatioekologia030104 developmental biologyVariation (linguistics)Evolutionary biologypopulation ecologyCommentaryta1181mutaatiotGeneral Agricultural and Biological SciencesEvolutionary Applications
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