Search results for "Annelid"

showing 10 items of 25 documents

Comparative Mitogenomics of Leeches (Annelida: Clitellata): Genome Conservation and Placobdella-Specific trnD Gene Duplication.

2015

Mitochondrial DNA sequences, often in combination with nuclear markers and morphological data, are frequently used to unravel the phylogenetic relationships, population dynamics and biogeographic histories of a plethora of organisms. The information provided by examining complete mitochondrial genomes also enables investigation of other evolutionary events such as gene rearrangements, gene duplication and gene loss. Despite efforts to generate information to represent most of the currently recognized groups, some taxa are underrepresented in mitochondrial genomic databases. One such group is leeches (Annelida: Hirudinea: Clitellata). Herein, we expand our knowledge concerning leech mitochon…

0106 biological sciences0301 basic medicineClitellatalcsh:MedicineBiochemistry01 natural sciencesGenomeDatabase and Informatics MethodsRNA TransferGene DuplicationGene OrderInvertebrate GenomicsGene duplicationAnnelidslcsh:SciencePhylogenyEnergy-Producing OrganellesData ManagementGeneticseducation.field_of_studyMultidisciplinaryPhylogenetic treePhylogenetic AnalysisGenomicsGenomic DatabasesMitochondriaNucleic acidsPhylogeneticsGenes MitochondrialPlacobdella parasiticaCellular Structures and OrganellesTransfer RNAResearch ArticleComputer and Information SciencesMitochondrial DNAPopulationBioenergeticsBiologyResearch and Analysis Methods010603 evolutionary biologyEvolution MolecularOpen Reading Frames03 medical and health sciencesPhylogeneticsLeechesGeneticsAnimalsEvolutionary Systematics14. Life underwaterCodonMolecular Biology TechniquesNon-coding RNAeducationMolecular BiologyTaxonomyMolecular Biology Assays and Analysis TechniquesEvolutionary Biologylcsh:ROrganismsBiology and Life SciencesComputational BiologyCell BiologyGenome Analysisbiology.organism_classificationInvertebratesBiological Databases030104 developmental biologyAnimal GenomicsGenome MitochondrialRNAlcsh:QPLoS ONE
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Variation in gene expression within clones of the earthworm Dendrobaena octaedra

2017

Gene expression is highly plastic, which can help organisms to both acclimate and adapt to changing environments. Possible variation in gene expression among individuals with the same genotype (among clones) is not widely considered, even though it could impact the results of studies that focus on gene expression phenotypes, for example studies using clonal lines. We examined the extent of within and between clone variation in gene expression in the earthworm Dendrobaena octaedra, which reproduces through apomictic parthenogenesis. Five microsatellite markers were developed and used to confirm that offspring are genetic clones of their parent. After that, expression of 12 genes was measured…

0106 biological sciences0301 basic medicinegenotypeClone (cell biology)lcsh:Medicineearthworms01 natural sciencesMicrosatellite LociDendrobaena octaedraGenotypeGene expressiongeeniekspressioAnnelidslcsh:ScienceGeneticsMultidisciplinarykloonitPhenotypePhenotypesMicrosatelliteGene CloningResearch ArticleGenotypingBiologyResearch and Analysis Methods010603 evolutionary biologygenotyyppi03 medical and health sciencesExtraction techniquesclonesGene TypesApomixisGeneticsAnimalsOligochaetaparthenogenesisMolecular Biology TechniquesMolecular BiologyGenepartenogeneesita1184lcsh:ROrganismsBiology and Life SciencesParthenogenesisInvertebratesRNA extraction030104 developmental biologygene expressionta1181lcsh:QMicrosatellite RepeatsCloningPLoS ONE
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Annelid Coelomic Fluid Proteins

2020

The coelomic cavity is part of the main body plan of annelids. This fluid filled space takes up a considerable volume of the body and serves as an important site of exchange of both metabolites and proteins. In addition to low molecular substances such as amino acids and glucose and lactate, the coelomic fluid contains different proteins that can arise through release from adjacent tissues (intestine) or from secretion by coelomic cells. In this chapter, we will review the current knowledge about the proteins in the annelid coelomic fluid. Given the number of more than 20,000 extant annelid species, existing studies are confined to a relatively few species. Most studies on the oligochaetes …

0301 basic medicinechemistry.chemical_classificationSipunculaEchiuraAnnelid030102 biochemistry & molecular biologybiologyAntimicrobial peptidesbiology.organism_classificationAmino acid03 medical and health sciencesVitellogenin030104 developmental biologychemistryBiochemistrybiology.proteinCoelomVitellogenesis
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Revisión de las familias Capitellidae Grube, 1862 y Maldanidae Malmgren, 1867 (Annelida, Polychaeta) en el ámbito Íbero-Balear. Estudio morfológico, …

2015

Se ha realizado un estudio exhaustivo de todos los táxones pertenecientes a las familias Capitellidae y Maldanidae (Annelida, Polychaeta) en el ámbito Íbero-balear. Para ello, se han actualizado sus registros en este sector geográfico y se examinaron varias colecciones biológicas. Las colecciones estudiadas fueron la Colección de Referencia del Laboratorio de Biología Marina de la Universitat de València, la colección de Maldanidae del Muséum National d’Histoire Naturelle de Paris (MNHN) y las colecciones de Capitellidae y Maldanidae del Museo Nacional de Ciencias Naturales de Madrid (MNCN). Este estudio ha permitido la actualización del catálogo faunístico de las familias Capitellidae y Ma…

:CIENCIAS DE LA VIDA::Biología animal (Zoología) ::Zoología marina [UNESCO]UNESCO::CIENCIAS DE LA VIDA::Biología animal (Zoología) ::Zoología marinaAnnelida:CIENCIAS DE LA TIERRA Y DEL ESPACIO [UNESCO]Capitellidaelista patrónPolychaetasistemáticafaunística:CIENCIAS DE LA VIDA [UNESCO]península IbéricaMaldanidaeUNESCO::CIENCIAS DE LA VIDAUNESCO::CIENCIAS DE LA TIERRA Y DEL ESPACIO
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Structural Analogies in Annelid Erythrocruorins

1986

Erythrocruorins from many annelid species have been studied by many authors. In spite of the great similarity of most physicochemical properties and of the electron-micrographs of these proteins, some debated experimental data divide the scientific community, e.g. the Mr of the whole molecule (ranging from 2,500 to 4,1000 kDa) and, in consequence, the Mr of the 1/12 molecules, the Mr and number of the smallest covalently bound subunits and the Mr and number of the globin-like monomers (1).

AnnelidbiologySimilarity (network science)StereochemistryChemistryErythrocruorinsbiology.organism_classification
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Oxygen binding properties of non-mammalian nerve globins

2006

Oxygen-binding globins occur in the nervous systems of both invertebrates and vertebrates. While the function of invertebrate nerve haemoglobins as oxygen stores that extend neural excitability under hypoxia has been convincingly demonstrated, the physiological role of vertebrate neuroglobins is less well understood. Here we provide a detailed analysis of the oxygenation characteristics of nerve haemoglobins from an annelid (Aphrodite aculeata), a nemertean (Cerebratulus lacteus) and a bivalve (Spisula solidissima) and of neuroglobin from zebrafish (Danio rerio). The functional differences have been related to haem coordination: the haem is pentacoordinate (as in human haemoglobin and myogl…

AnnelidaDanioNeuroglobinNerve Tissue ProteinsCooperativityBiochemistryHemoglobinschemistry.chemical_compoundJournal ArticleAnimalsGlobinNerve TissueMolecular BiologyConserved SequenceZebrafishAnnelidbiologyResearch Support Non-U.S. Gov'tTemperatureHexacoordinateCell BiologyHydrogen-Ion Concentrationbiology.organism_classificationGlobinsOxygenMyoglobinchemistryBiochemistryNeuroglobinOxygen binding
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Studies on the natural hemolytic system of the annelid worm Spirographis spallanzanii viviani (Polychaeta).

1981

Abstract Hemolytic activity in the hemolymph of Spirographis spallanzanii was estabilished against Bufo, sheep, calf, rabbit, rat, human A, B, O erythrocytes. Chemico-physical treatments suggest that the hemolytic factor could be a thermo-labile protein whose activity requires calcium ions and which is active over broad pH and temperature ranges. Some of these properties and the sigmoidal curve obtained by plotting the quantity of hemolymph against the percentage of hemolysis, produce some analogies with the mammalian lytic system.

AnnelidaImmunologychemistry.chemical_elementBiologyCalciumHemolysisHemolysin ProteinsHemolymphHemolymphmedicineAnimalsHumansMagnesiumHorsesSheepAnnelid wormTemperatureAnatomyHydrogen-Ion Concentrationmedicine.diseaseHemolysisBufonidaeRatschemistryBiochemistryCalciumCattleRabbitsChickensDevelopmental BiologyDevelopmental and comparative immunology
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Neuroglobin and cytoglobin: fresh blood to the vertebrate globin family

2002

Neuroglobin and cytoglobin are two recently discovered members of the vertebrate globin family. Both are intracellular proteins endowed with hexacoordinated heme-Fe atoms, in their ferrous and ferric forms, and display O2 affinities comparable with that of myoglobin. Neuroglobin, which is predominantly expressed in nerve cells, is thought to protect neurons from hypoxic–ischemic injury. It is of ancient evolutionary origin, and is homologous to nerve globins of invertebrates. Cytoglobin is expressed in many different tissues, although at varying levels. It shares common ancestry with myoglobin, and can be traced to early vertebrate evolution. The physiological roles of neuroglobin and cytog…

AnnelidaMolecular Sequence DataNeuroglobinNerve Tissue ProteinsHemeReview ArticleBiochemistryMicechemistry.chemical_compoundbiology.animalGeneticsAnimalsHumansAmino Acid SequenceGlobinMolecular BiologyHemeZebrafishConserved SequenceZebrafishBrain ChemistrybiologyCytoglobinCytoglobinBrainVertebratebiology.organism_classificationMolecular biologyGlobinsCell biologyOxygenMyoglobinchemistryNeuroglobinSequence AlignmentFunction (biology)EMBO reports
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Data from: Functional responses of multi-taxa communities to disturbance and stress gradients in a restored floodplain

2015

1. Trait-based approaches can reveal the mechanisms through which disturbances or stress impact communities, allowing comparisons of the role of different mechanisms in shaping communities among taxonomic groups. Such information can lead to higher comparability, transferability and predictability of the outcome of restoration projects. However, multitaxa trait-based approaches were rarely used in the context of ecosystem restoration. 2. We investigated the responses to environmental gradients of seven taxa (vascular plants, staphylinid and carabid beetles, spiders, isopods, diplopods and earthworms) in a restored floodplain using a species traits approach. We assessed the impact of flood d…

Annelidacommunity weighted mean of traitsLife SciencesearthwormsStaphylinidaeriparian ecosystemsmedicine and health carespecies traitsDiplopodaAraneaecosystem functionsMedicineCarabidaePlantaeArthropodsIsopoda
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Characterization of a cDNA encoding RP43, a CUB-domain-containing protein from the tube of Riftia pachyptila (Vestimentifera), and distribution of it…

2000

A major 43kDa protein from the protective tube of Riftiapachyptila (Vestimentifera), named RP43, was partly microsequenced after isolation by SDS/PAGE from the protein fraction of tubes collected around the hydrothermal vents at the East Pacific Rise. On the basis of the partial peptide sequences obtained, experiments using reverse-transcriptase-mediated PCR and rapid amplification of cDNA ends led to the complete cDNA sequence. Analysis of deduced amino acid sequence of RP43 showed the presence of CUB domains (100–110-residue-spanning domains first reported in the complement subcomponents C1r/C1s, epidermal-growth-factor-related sea urchin protein and bone morphogenetic protein 1) that se…

DNA ComplementaryTranscription GeneticAnnelidaMolecular Sequence DataChitinPeptideBioinformaticsBiochemistryEpitheliumBone morphogenetic protein 1Rapid amplification of cDNA endsSequence Analysis ProteinComplementary DNAbiology.animalAnimalsAmino Acid SequenceRNA MessengerCloning MolecularMolecular BiologyPeptide sequenceSea urchinChromatography High Pressure LiquidIn Situ Hybridizationchemistry.chemical_classificationMessenger RNABase SequenceSequence Homology Amino AcidbiologyReverse Transcriptase Polymerase Chain ReactionHelminth ProteinsSequence Analysis DNACell BiologyBlotting NorthernCUB domainProtein Structure TertiaryCell biologychemistryElectrophoresis Polyacrylamide GelEpidermisProtein BindingResearch ArticleBiochemical Journal
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