Search results for "Aphids"

showing 10 items of 74 documents

Comparative Molecular Evolution of Primary (Buchnera) and Secondary Symbionts of Aphids Based on Two Protein-Coding Genes

2001

A+T content, phylogenetic relationships, codon usage, evolutionary rates, and ratio of synonymous versus non-synonymous substitutions have been studied in partial sequences of the atpD and aroQ/pheA genes of primary ( Buchnera) and secondary symbionts of aphids and a set of selected non-symbiotic bacteria, belonging to the five subdivisions of the Proteobacteria. Compared to the homologous genes of the last group, both genes belonging to Buchnera behave in a similar way, showing a higher A+T content, forming a monophyletic group, a loss in codon bias, especially in third base position, an evolutionary acceleration and an increase in the number of non-synonymous substitutions, confirming pre…

DNA BacterialBiologyEvolution MolecularMonophylyBuchneraMolecular evolutionProteobacteriaGeneticsAnimalsCodonSymbiosisMolecular BiologyGenePhylogenyEcology Evolution Behavior and SystematicsGeneticsBase CompositionPhylogenetic treeHost (biology)Sequence Analysis DNAbiochemical phenomena metabolism and nutritionbiology.organism_classificationAT Rich SequenceAphidsCodon usage biasProteobacteriaBuchneraJournal of Molecular Evolution
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New Clues about the Evolutionary History of Metabolic Losses in Bacterial Endosymbionts, Provided by the Genome of Buchnera aphidicola from the Aphid…

2011

ABSTRACT The symbiotic association between aphids (Homoptera) and Buchnera aphidicola ( Gammaproteobacteria ) started about 100 to 200 million years ago. As a consequence of this relationship, the bacterial genome has undergone a prominent size reduction. The downsize genome process starts when the bacterium enters the host and will probably end with its extinction and replacement by another healthier bacterium or with the establishment of metabolic complementation between two or more bacteria. Nowadays, several complete genomes of Buchnera aphidicola from four different aphid species ( Acyrthosiphon pisum , Schizaphis graminum , Baizongia pistacea , and Cinara cedri ) have been fully seque…

DNA BacterialMolecular Sequence DataBacterial genome sizeApplied Microbiology and BiotechnologyGenomeEvolution MolecularBuchneraPhylogeneticsAnimalsEvolutionary and Genomic MicrobiologySymbiosisPhylogenyWhole genome sequencingGeneticsComparative genomicsEcologyPhylogenetic treebiologySequence Analysis DNAbiochemical phenomena metabolism and nutritionbiology.organism_classificationAcyrthosiphon pisumAphidsBuchneraGenome BacterialFood ScienceBiotechnologyApplied and Environmental Microbiology
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Comparative analysis of two genomic regions among four strains of Buchnera aphidicola, primary endosymbiont of aphids

2004

Preliminary analysis of two selected genomic regions of Buchnera aphidicola BCc, the primary endosymbiont of the cedar aphid Cinara cedri, has revealed a number of interesting features when compared with the corresponding homologous regions of the three B. aphidicola genomes previously sequenced, that are associated with different aphid species. Both regions exhibit a significant reduction in length and gene number in B. aphidicola BCc, as it could be expected since it possess the smallest bacterial genome. However, the observed genome reduction is not even in both regions, as it appears to be dependent on the nature of their gene content. The region fpr-trxA, that contains mainly metabolic…

DNA BacterialMolecular Sequence DataBacterial genome sizeBiologyGenomeIntergenic regionBuchneraSpecies SpecificityGeneticsHomologous chromosomeAnimalsORFSSymbiosisGeneGeneticsBase CompositionAphidChromosome MappingSequence Analysis DNAGeneral Medicinebiology.organism_classificationGenes BacterialAphidsDNA IntergenicBuchneraGenome Bacterial
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Molecular Systematics of Aphids and Their Primary Endosymbionts

2001

Abstract Aphids constitute a monophyletic group within the order Homoptera (i.e., superfamily Aphidoidea). The Aphidoidea originated in the Jurassic about 150 my ago from some aphidiform ancestor whose origin can be traced back to about 250 my ago. They exhibit a mutualistic association with intracellular bacteria ( Buchnera sp.) related to Escherichia coli. Buchnera is usually considered the aphids' primary endosymbiont. The association is obligate for both partners. The 16S rDNA-based phylogeny of Buchnera from four aphid families showed complete concordance with the morphology-based phylogeny of their aphid hosts, which pointed to a single original infection in a common ancestor of aphid…

DNA BacterialMolecular Sequence DataGenes InsectEvolution MolecularMonophylyBuchneraPhylogeneticsRNA Ribosomal 16SBotanyGeneticsAnimalsSymbiosisMolecular BiologyPhylogenyEcology Evolution Behavior and SystematicsAphidObligatebiologyfood and beveragesAphididaeDNASequence Analysis DNAbiochemical phenomena metabolism and nutritionbiology.organism_classificationProton-Translocating ATPasesSister groupGenes BacterialEvolutionary biologyAphidsMolecular phylogeneticsBuchneraMolecular Phylogenetics and Evolution
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Prephenate dehydratase from the aphid endosymbiont (Buchnera) displays changes in the regulatory domain that suggest its desensitization to inhibitio…

2000

ABSTRACT Buchnera aphidicola , the prokaryotic endosymbiont of aphids, complements dietary deficiencies with the synthesis and provision of several essential amino acids. We have cloned and sequenced a region of the genome of B. aphidicola isolated from Acyrthosiphon pisum which includes the two-domain aroQ/pheA gene. This gene encodes the bifunctional chorismate mutase-prephenate dehydratase protein, which plays a central role in l -phenylalanine biosynthesis. Two changes involved in the overproduction of this amino acid have been detected. First, the absence of an attenuator region suggests a constitutive expression of this gene. Second, the regulatory domain of the Buchnera prephenate de…

DNA BacterialPhenylalanineMolecular Sequence DataPrephenate dehydratasePhenylalanineMicrobiologychemistry.chemical_compoundBiosynthesisBuchneraEscherichia coliAnimalsHumansAmino Acid SequenceEnzyme InhibitorsSymbiosisMolecular BiologyGenechemistry.chemical_classificationGeneticsBinding SitesbiologyBase SequenceSequence Homology Amino Acidbiochemical phenomena metabolism and nutritionbiology.organism_classificationPrephenate DehydrataseAmino acidEnzymeBiochemistrychemistryDehydrataseAphidsBuchneraGenome BacterialPopulation Genetics and EvolutionChorismate MutaseJournal of bacteriology
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Identification of a gene overexpressed in aphids reared under short photoperiod.

2003

Most aphids develop a cyclic parthenogenesis life-cycle. After several generations of viviparously produced parthenogenetic females, follows a single annual generation of sexual individuals, usually in autumn, that mate and lay the sexual eggs. Shortening of photoperiod at the end of the summer (together with temperature) is a key factor inducing the sexual response. Currently no genes involved in the cascade of events that lead to the appearance of sexual forms have been reported. After a Differential Display RT-PCR survey performed on Acyrthosiphon pisum aphids, we identified a gene that is overexpressed in aphids reared under short photoperiod conditions that induce sexuality in this spe…

DNA ComplementaryPhotoperiodMolecular Sequence DataBiologyBiochemistrySexual Behavior AnimalComplementary DNAAnimalsCircadian rhythmAmino Acid SequenceCloning MolecularMolecular BiologyGeneDNA PrimersphotoperiodismGeneticsDifferential displayBase SequenceSequence Homology Amino Acidfood and beveragesParthenogenesisbiology.organism_classificationAcyrthosiphon pisumInsect ScienceAphidsGABAergicInsect ProteinsInsect biochemistry and molecular biology
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Coexistence of Wolbachia with Buchnera aphidicola and a Secondary Symbiont in the Aphid Cinara cedri

2004

ABSTRACT Intracellular symbiosis is very common in the insect world. For the aphid Cinara cedri , we have identified by electron microscopy three symbiotic bacteria that can be characterized by their different sizes, morphologies, and electrodensities. PCR amplification and sequencing of the 16S ribosomal DNA (rDNA) genes showed that, in addition to harboring Buchnera aphidicola , the primary endosymbiont of aphids, C. cedri harbors a secondary symbiont (S symbiont) that was previously found to be associated with aphids (PASS, or R type) and an α-proteobacterium that belongs to the Wolbachia genus. Using in situ hybridization with specific bacterial probes designed for symbiont 16S rDNA seq…

Genetics and Molecular BiologyBacterial genome sizeBiologyDNA RibosomalPolymerase Chain ReactionMicrobiologyBuchneraRNA Ribosomal 16SBotanyAnimalsSymbiosisMolecular BiologyRibosomal DNAPhylogenyGeneticsAphidBacteriocytefungifood and beveragesbiochemical phenomena metabolism and nutritionbiology.organism_classificationMicroscopy ElectronAphidsCinarabacteriaWolbachiaBuchneraWolbachiaSymbiotic bacteriaJournal of Bacteriology
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Extreme genome reduction in Buchnera spp.: Toward the minimal genome needed for symbiotic life

2002

Buchnera is a mutualistic intracellular symbiont of aphids. Their association began about 200 million years ago, with host and symbiont lineages evolving in parallel since that time. During this coevolutionary process, Buchnera has experienced a dramatic decrease of genome size, retaining only essential genes for its specialized lifestyle. Previous studies reported that genome size in Buchnera spp. is very uniform, suggesting that genome shrinkage occurred early in evolution, and that modern lineages retain the genome size of a common ancestor. Our physical mapping of Buchnera genomes obtained from five aphid lineages shows that the genome size is not conserved among them, but has been red…

GeneticsDNA BacterialGenome evolutionMultidisciplinarybiologyBase SequenceMolecular Sequence DataGenome projectBacterial genome sizebiochemical phenomena metabolism and nutritionBiological Sciencesbiology.organism_classificationGenomeBuchneraGene densityAphidsAnimalsMinimal genomeBuchneraSymbiosisGenome sizeGenome Bacterial
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Plasmids in the aphid endosymbiont Buchnera aphidicola with the smallest genomes. A puzzling evolutionary story

2006

Buchnera aphidicola, the primary endosymbiont of aphids, has undergone important genomic and biochemical changes as an adaptation to intracellular life. The most important structural changes include a drastic genome reduction and the amplification of genes encoding key enzymes for the biosynthesis of amino acids by their translocation to plasmids. Molecular characterization through different aphid subfamilies has revealed that the genes involved in leucine and tryptophan biosynthesis show a variable fate, since they can be located on plasmids or on the chromosome in different lineages. This versatility contrasts with the genomic stasis found in three distantly related B. aphidicola strains …

GeneticsRecombination GeneticSubfamilybiologyfood and beveragesChromosomeGeneral Medicinebiochemical phenomena metabolism and nutritionbiology.organism_classificationGenomeEvolution MolecularRec A RecombinasesPlasmidBuchneraAphidsGeneticsAnimalsLeucineAmino AcidsBuchneraSymbiosisGeneBacteriaGenome BacterialPlasmids
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The haplotype distribution of two genes of citrus tristeza virus is altered after host change or aphid transmission.

1999

Genetic variability of citrus tristeza virus (CTV) was studied using the haplotypes detected by single-strand conformation polymorphism (SSCP) analysis of genes p18 and p20 in six virus populations of two origins. The Spanish group included a CTV isolate and subisolates obtained by graft-transmission to different host species. The other included two subisolates aphid-transmitted from a single Japanese isolate. The homozygosity observed for gene p20 was always significantly higher than that expected under neutral evolution, whereas only three populations showed high homozygosity for p18, suggesting stronger host constraints for p20 than for p18. Sequential transmissions of a Spanish isolate …

Geneticseducation.field_of_studyAnalysis of VarianceCitrusClosterovirusGenes ViralHost (biology)PopulationHaplotypeCitrus tristeza virusSingle-strand conformation polymorphismBiologybiology.organism_classificationAnalysis of molecular varianceCapsidHaplotypesVirologyAphidsAnimalsClosterovirusGenetic variabilityeducationMathematical ComputingPolymorphism Single-Stranded ConformationalVirology
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