Search results for "Aquatic environments"

showing 10 items of 24 documents

A spatially explicit risk assessment approach: Cetaceans and marine traffic in the Pelagos Sanctuary (Mediterranean Sea).

2017

15 páginas, 5 figuras, 2 tablas.-- This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited

0106 biological scienceslcsh:MedicineMarine and Aquatic SciencesTransportationStenella coeruleoalba01 natural sciencesMediterranean seaStenellaOceanslcsh:ScienceConservation ScienceMammalsMultidisciplinarybiologyFin WhaleMarine reserveFin WhalesHabitatsBottle-Nosed DolphinGeographyHabitatVertebratesEngineering and TechnologyResearch ArticleConservation of Natural ResourcesDolphinsMarine BiologySede Central IEO010603 evolutionary biologyRisk AssessmentBodies of waterbiology.animalMediterranean SeaAnimals14. Life underwaterMarine MammalsEcosystemShipsModels StatisticalBalaenoptera010604 marine biology & hydrobiologylcsh:REcology and Environmental SciencesOrganismsWhalesBiology and Life SciencesAquatic EnvironmentsPelagic zoneMarine spatial planningBayes Theorembiology.organism_classificationMarine EnvironmentsBoatsFisheryAmniotesEarth Scienceslcsh:QMarine protected area
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A Comparative Analysis of Aquatic and Polyethylene-Associated Antibiotic-Resistant Microbiota in the Mediterranean Sea

2021

Simple Summary In recent years, a growing interest has been devoted to the bacterial characterization of marine plastic debris. So far, a few publications have explored the composition of microbial communities on polyethylene (PE) waste items and the occurrence of antibiotic-resistant bacteria (ARB). The occurrence of ARB in natural matrices can contribute to the spread of antibiotic resistance genes (ARGs) among environmental bacteria. In this study, we compared the microbial composition and the presence of ARGs in water and PE fragments collected from a stream and the seawater in a coastal area of Northwestern Sicily. Our findings showed more ARGs on PE fragments than the corresponding wa…

0301 basic medicineAquatic environments030106 microbiologyPlastisphereBiologyIntegronArticleResistomeGeneral Biochemistry Genetics and Molecular BiologyIntegron03 medical and health sciencesAntibiotic resistanceMediterranean seaAntibiotic resistance genesFood scienceMicrobiomelcsh:QH301-705.5General Immunology and MicrobiologyAquatic ecosystemPlastisphereResistome030104 developmental biologylcsh:Biology (General)Antibiotic resistant bacteriaPolyethylenebiology.proteinSeawaterMicrobiomeGeneral Agricultural and Biological SciencesBiology
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Modulation of the growth and metabolic response of cyanobacteria by the multifaceted activity of naringenin

2017

The interactions between the plant-derived bioflavonoid, naringenin, and prokaryotic microalgae representatives (cyanobacteria), were investigated with respect to its influence on the growth and metabolic response of these microorganisms. To achieve reliable results, the growth of cyanobacteria was determined based on measurements of chlorophyll content, morphological changes were assessed through microscopic observations, and the chemical response of cells was determined using liquid and gas chromatography (HPLC; GC-FID). The results show that micromolar levels of naringenin stimulated the growth of cyanobacteria. Increased growth was observed for halophilic strains at naringenin concentra…

ChlorophyllPigments0301 basic medicineCyanobacteriaNaringeninExopolysaccharidesChloroplastsMicroorganismCellGlycobiologyMarine and Aquatic Scienceslcsh:MedicineFresh WaterPlant ScienceBiochemistrychemistry.chemical_compoundElectron MicroscopyNostoclcsh:ScienceLiquid ChromatographyMicroscopyMultidisciplinarybiologyChemistryChromatographic Techniquesfood and beveragesHalophilemedicine.anatomical_structureBiochemistryFlavanonesPhysical SciencesScanning Electron MicroscopyCellular Structures and OrganellesCellular TypesResearch ArticleFreshwater EnvironmentsChromatography GasPlant Cell BiologyMaterials Science030106 microbiologyCyanobacteriaResearch and Analysis MethodsCell wallExcretion03 medical and health sciencesPolysaccharidesPlant CellsmedicineMaterials by AttributeBacteriaOrganic PigmentsEcology and Environmental Scienceslcsh:ROrganismsBiology and Life SciencesAquatic EnvironmentsCell Biologybiology.organism_classificationAnabaenaHigh Performance Liquid Chromatography030104 developmental biologyEarth Scienceslcsh:QBacteriaChromatography LiquidNostoc muscorumPLOS ONE
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Geosphere-biosphere interactions in bio-activity volcanic lakes: Evidences from Hule and Rìo Cuarto (Costa Rica)

2014

Hule and R ́ıo Cuarto are maar lakes located 11 and 18 km N of Poa ́s volcano along a 27 km long fracture zone, in the Central Volcanic Range of Costa Rica. Both lakes are characterized by a stable thermic and chemical stratification and recently they were affected by fish killing events likely related to the uprising of deep anoxic waters to the surface caused by rollover phenomena. The vertical profiles of temperature, pH, redox potential, chemical and isotopic compositions of water and dissolved gases, as well as prokaryotic diversity estimated by DNA fingerprinting and massive 16S rRNA pyrosequencing along the water column of the two lakes, have highlighted that different bio-geochemica…

Genetics and Molecular Biology (all)Aerobic bacterialcsh:MedicineMarine and Aquatic Sciencestrace elementsSettore BIO/19 - Microbiologia GeneraleBiochemistryWater columnBiochemistry Genetics and Molecular Biology (all); Agricultural and Biological Sciences (all)RNA Ribosomal 16SLimnologylcsh:SciencePhylogenyTotal organic carbonMultidisciplinarygeography.geographical_feature_categoryEcologyBiosphereBiogeochemistryHydrogen-Ion ConcentrationAnoxic watersMaarChemistryOceanographyPhysical SciencesMethaneOxidation-ReductionResearch ArticleFreshwater EnvironmentsCosta RicaSettore BIO/07 - EcologiaVolcanic EruptionsCarbon CycleHydrothermal VentsEnvironmental ChemistryMolecular Biology TechniquesSequencing TechniquesMolecular BiologygeographyVolcanic lakeBacterialcsh:RHigh Throughput SequencingEcology and Environmental SciencesOrganismsChemical CompoundsBiology and Life SciencesAquatic EnvironmentsCarbon DioxideArchaeaDNA FingerprintingOxygenLakesGeochemistryVolcanoAgricultural and Biological Sciences (all)Settore GEO/08 - Geochimica e VulcanologiaEarth SciencesEnvironmental sciencelcsh:QSurface water
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Genome-Wide SNP-Genotyping Array to Study the Evolution of the Human Pathogen Vibrio vulnificus Biotype 3

2014

Vibrio vulnificus is an aquatic bacterium and an important human pathogen. Strains Of V. vulnificus are classified into three different biotypes. The newly emerged biotype 3 has been found to be clonal and restricted to Israel. In the family Vibrionaceae , horizontal gene transfer is the main mechanism responsible for the emergence of new pathogen groups. To better understand the evolution of the bacterium, and in particular to trace the evolution of biotype 3, we performed genome-wide SNP genotyping of 254 clinical and environmental V. vulnificus isolates with worldwide distribution recovered over a 30-year period, representing all phylogeny groups. A custom single-nucleotide polymorphism …

GenotypingGenome evolutionlcsh:MedicineMarine and Aquatic SciencesGenome ViralVibrio vulnificusPolymorphism Single NucleotideMicrobiologyGenomeEvolution MolecularMolecular GeneticsGeneticslcsh:ScienceMolecular Biology TechniquesCladeVibrio vulnificusMolecular BiologyGenotypingComparative genomicsGeneticsEvolutionary BiologyBacterial EvolutionMultidisciplinarybiologyPhylogenetic treelcsh:REcology and Environmental SciencesBiology and Life SciencesAquatic Environmentsbiology.organism_classificationOrganismal EvolutionSNP genotypingHaplotypesBacteris patògensMicrobial EvolutionEarth Scienceslcsh:QPopulation GeneticsResearch ArticlePLoS ONE
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Closely Related Archaeal Haloarcula hispanica Icosahedral Viruses HHIV-2 and SH1 Have Nonhomologous Genes Encoding Host Recognition Functions

2012

Studies on viral capsid architectures and coat protein folds have revealed the evolutionary lineages of viruses branching to all three domains of life. A widespread group of icosahedral tailless viruses, the PRD1-adenovirus lineage, was the first to be established. A double -barrel fold for a single major capsid protein is characteristic of these viruses. Similar viruses carrying genes coding for two major capsid proteins with a more complex structure, such as Thermus phage P23-77 and haloarchaeal virus SH1, have been isolated. Here, we studied the host range, life cycle, biochemical composition, and genomic sequence of a new isolate, Haloarcula hispanica icosahedral virus 2 (HHIV-2), which…

INSIGHTSsidontavirusesNUCLEOTIDE-SEQUENCEGENOME SEQUENCEPROTEINHALOPHILIC ARCHAEONAQUATIC ENVIRONMENTSBACTERIOPHAGE PRD1VACCINIA VIRUSVIRAL EVOLUTION
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Short-term occupations at high elevation during the Middle Paleolithic at Kalavan 2 (Republic of Armenia).

2021

The Armenian highlands encompasses rugged and environmentally diverse landscapes and is characterized by a mosaic of distinct ecological niches and large temperature gradients. Strong seasonal fluctuations in resource availability along topographic gradients likely prompted Pleistocene hominin groups to adapt by adjusting their mobility strategies. However, the role that elevated landscapes played in hunter-gatherer settlement systems during the Late Pleistocene (Middle Palaeolithic [MP]) remains poorly understood. At 1640 m above sea level, the MP site of Kalavan 2 (Armenia) is ideally positioned for testing hypotheses involving elevation-dependent seasonal mobility and subsistence strateg…

Lesser CaucasusTechnologyHominidsSteppeStratigraphySocial SciencesMarine and Aquatic Scienceshabitat selection010502 geochemistry & geophysics01 natural sciences[SDU.STU.GC]Sciences of the Universe [physics]/Earth Sciences/GeochemistryMiddle Paleolithic0601 history and archaeologyHistory AncientSedimentary Geologyraw-materialMultidisciplinarygeography.geographical_feature_category060102 archaeologyEcologyFossilsAltitudeQRexplosive eruptionsHominidaeGeology06 humanities and the arts[SHS.GEO]Humanities and Social Sciences/GeographyArmeniaGeographyArchaeology[SDU.STU.CL]Sciences of the Universe [physics]/Earth Sciences/Climatology[SDU.STU.ST]Sciences of the Universe [physics]/Earth Sciences/StratigraphylanguageMedicineVolcanoesSeasonsPhysical AnthropologyGeghama highlandArtifactsResearch ArticleFreshwater EnvironmentsVolcanic GlassObsidianPleistocene[SHS.ARCHEO]Humanities and Social Sciences/Archaeology and PrehistoryScience[SDE.MCG]Environmental Sciences/Global ChangesVolcanology930obsidian artifactsArchaic HumansRiversIgneous GeologyPaleoanthropologyAnimalsHumansHominins[SDU.STU.GL]Sciences of the Universe [physics]/Earth Sciences/Glaciology[SDU.STU.GM]Sciences of the Universe [physics]/Earth Sciences/Geomorphology[SDU.STU.HY]Sciences of the Universe [physics]/Earth Sciences/HydrologyOccupations[SDU.ENVI]Sciences of the Universe [physics]/Continental interfaces environmentSea level0105 earth and related environmental sciencesPetrologyEcological niche[SDU.STU.TE]Sciences of the Universe [physics]/Earth Sciences/Tectonicsvolcano Eastern AnatoliaArmenianEcology and Environmental SciencesSubsistence agricultureBiology and Life SciencesPaleontologyAquatic EnvironmentsBodies of Water900 Geschichte und Geografie::930 Geschichte des Altertums (bis ca. 499) Archäologie::930 Geschichte des Altertums bis ca. 499 Archäologie[SDE.ES]Environmental Sciences/Environmental and Societylanguage.human_languagewax n-alkanesPaleoanthropology[SHS.ENVIR]Humanities and Social Sciences/Environmental studiesAnthropologyEarth SciencesAnimal MigrationSedimentPloS one
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Characterization of small HSPs from Anemonia viridis reveals insights into molecular evolution of alpha crystallin genes among cnidarians.

2014

Gene family encoding small Heat-Shock Proteins (sHSPs containing α-crystallin domain) are found both in prokaryotic and eukaryotic organisms; however, there is limited knowledge of their evolution. In this study, two small HSP genes termed AvHSP28.6 and AvHSP27, both organized in one intron and two exons, were characterised in the Mediterranean snakelocks anemone Anemonia viridis. The release of the genome sequence of Hydra magnipapillata and Nematostella vectensis enabled a comprehensive study of the molecular evolution of α-crystallin gene family among cnidarians. Most of the H. magnipapillata sHSP genes share the same gene organization described for AvHSP28.6 and AvHSP27, differing from …

LipopolysaccharidesMarine and Aquatic SciencesGene ExpressionCnidarianSea anemoneGenomeAnemoniaGene duplicationProtein Isoformsalpha-CrystallinsPhylogenyGenomic organizationGeneticsMultidisciplinarybiologyReverse Transcriptase Polymerase Chain ReactionQTemperatureRMedicineAnemonia viridiSmall HSP; Anemonia viridis; Cnidarians; molecular evolutionResearch ArticleScienceMolecular Sequence DataMarine BiologySmall HSPEvolution MolecularCnidariaSpecies SpecificityMolecular evolutionMetals HeavySequence Homology Nucleic AcidAnimalsGene familyAmino Acid SequenceMolecular BiologyGeneEvolutionary BiologyBase SequenceSequence Homology Amino Acidmolecular evolutionGene Expression ProfilingEcology and Environmental SciencesBiology and Life SciencesAquatic EnvironmentsCell Biologybiology.organism_classificationHeat-Shock Proteins SmallSea AnemonesEarth SciencesPLoS ONE
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Current status of Schistosoma mansoni infection among previously treated rural communities in the Abbey and Didessa Valleys, Western Ethiopia: Implic…

2021

Background Schistosoma constitutes a major public health problem and developmental challenges in the majority of developing and subtropical regions. The World Health Organization has set guidelines for the control and elimination of schistosomiasis. Ethiopia is providing school-based Mass Drug Administration (MDA) at the study areas of the Abbey and Didessa Valleys of western Ethiopian since 2015. Moreover, mass treatment was already done in the same villages 30 years ago. However, the current Schistosoma mansoni infection status among humans and snails in the study areas is not known. Hence, the present study aims to determine the current status. Methods A community-based cross-sectional …

MaleRural PopulationTopographySchistosoma MansoniSanitationSnailsMarine and Aquatic SciencesGeographical LocationsFeces0302 clinical medicineMedical ConditionsHygienePrevalenceMedicine and Health SciencesSchistosomiasisPublic and Occupational Health030212 general & internal medicineSanitationSocioeconomicsChildEggs per grammedia_commonMultidisciplinarySchoolsbiologyQREukaryotaHygieneGeographyHelminth InfectionsChild PreschoolMass Drug AdministrationSchistosomaMedicineFemaleSchistosoma mansoniEnvironmental HealthResearch ArticleNeglected Tropical DiseasesFreshwater EnvironmentsValleysWet seasonAdultmedicine.medical_specialtyAdolescentmedia_common.quotation_subjectScience030231 tropical medicineEnvironment03 medical and health sciencesYoung AdultRiversSurface WaterHelminthsparasitic diseasesmedicineParasitic DiseasesAnimalsHumansMass drug administrationSchistosomaLandformsPublic healthEcology and Environmental SciencesOrganismsBiology and Life SciencesAquatic EnvironmentsGeomorphologyBodies of Waterbiology.organism_classificationTropical DiseasesInvertebratesSchistosomiasis mansoniVDP::Medical disciplines: 700Health CareCross-Sectional StudiesPeople and PlacesAfricaEarth SciencesEthiopiaHydrologyZoologyPLoS ONE
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Origin of the natural variation in the storage of dietary carotenoids in freshwater amphipod crustaceans

2020

16 pages; International audience; Carotenoids are diverse lipophilic natural pigments which are stored in variable amounts by animals. Given the multiple biological functions of carotenoids, such variation may have strong implications in evolutionary biology. Crustaceans such as Gammarus amphipods store large amounts of these pigments and inter-population variation occurs. While differences in parasite selective pressure have been proposed to explain this variation, the contribution of other factors such as genetic differences in the gammarid ability to assimilate and/or store pigments, and the environmental availability of carotenoids cannot be dismissed. This study investigates the relati…

Pigments0106 biological sciencesSpeciationMarine and Aquatic SciencesFresh Water01 natural sciencesGammarusMedicine and Health SciencesNatural variabilityMaterialsCarotenoidchemistry.chemical_classificationEnzyme Precursors0303 health sciencesMultidisciplinarybiologyQREukaryotafood and beveragesCrustaceansPhysical SciencesMedicineCatechol OxidaseResearch ArticleFreshwater EnvironmentsEvolutionary ProcessesArthropodaScienceMaterials ScienceZoologyNatural variation010603 evolutionary biology03 medical and health sciencesRiversCryptic SpeciationGeneticsParasitic DiseasesAnimalsAmphipodaParasitesNutrition030304 developmental biologyEvolutionary BiologyOrganic PigmentsPopulation BiologyEcology and Environmental SciencesOrganismsBiology and Life SciencesAquatic EnvironmentsEnvironmental availabilityBodies of Waterbiology.organism_classificationCarotenoidsInvertebratesCrustaceanDiet[SDV.BA.ZI]Life Sciences [q-bio]/Animal biology/Invertebrate ZoologychemistryFood supplementMicrosporidiaGammarus fossarumEarth SciencesGenetic PolymorphismPopulation GeneticsPLOS ONE
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