Search results for "Array"

showing 10 items of 1264 documents

Glycogen synthase 2 is a novel target gene of peroxisome proliferator-activated receptors.

2007

International audience; Glycogen synthase 2 (Gys-2) is the ratelimiting enzyme in the storage of glycogen in liver and adipose tissue, yet little is known about regulation of Gys-2 transcription. The peroxisome proliferator-activated receptors (PPARs) are transcription factors involved in the regulation of lipid and glucose metabolism and might be hypothesized to govern glycogen synthesis as well. Here, we show that Gys-2 is a direct target gene of PPARalpha, PPARbeta/delta and PPARgamma. Expression of Gys-2 is significantly reduced in adipose tissue of PPARalpha-/-, PPARbeta/delta-/- and PPARgamma+/- mice. Furthermore, synthetic PPARbeta/delta, and gamma agonists markedly up-regulate Gys-2…

Animals; Chromatin/ultrastructure; DNA Primers; Gene Expression Regulation Enzymologic; Glycogen Synthase/genetics; Hepatocytes/enzymology; Hepatocytes/physiology; Mice; Mice Knockout; Peroxisome Proliferator-Activated Receptors/deficiency; Peroxisome Proliferator-Activated Receptors/genetics; Polymerase Chain Reaction; RNA/genetics; RNA/isolation & purification; Rats; Transcription GeneticTranscription GeneticPeroxisome proliferator-activated receptorMESH : HepatocytesPPREPolymerase Chain Reactionadipose-tissuePPARMESH: HepatocytesMice0302 clinical medicineMESH: Animals610 Medicine & healthchemistry.chemical_classificationRegulation of gene expression0303 health sciencesGlycogenglycogen-synthaseChromatinGlycogen Synthase030220 oncology & carcinogenesisMESH : DNA PrimersmicroarrayMESH: DNA Primersmedicine.medical_specialtyHealth aging / healthy living [IGMD 5]fatty-acid oxidationliverGene Expression Regulation EnzymologicMESH: Chromatin03 medical and health sciencesskeletal-muscleGlycogen synthaseMolecular Biology[ SDV.BBM ] Life Sciences [q-bio]/Biochemistry Molecular BiologyHNF4αVLAGPharmacologybeta/deltaMESH: Polymerase Chain Reactionresponse elementsMESH : Peroxisome Proliferator-Activated ReceptorsEndocrinologychemistryMicrobial pathogenesis and host defense [UMCN 4.1]Response elementPeroxisome Proliferator-Activated ReceptorsAdipose tissueMESH: Peroxisome Proliferator-Activated Receptorsin-vivoMESH: Mice KnockoutTransactivationchemistry.chemical_compoundVoeding Metabolisme en GenomicaMESH : RNAMESH : Polymerase Chain ReactionMice KnockoutMESH : ChromatinMESH : RatsMESH: Gene Expression Regulation EnzymologicMetabolism and Genomicsadipose tissueMetabolisme en GenomicaMolecular MedicineNutrition Metabolism and GenomicsMESH : Glycogen SynthaseResearch ArticleMESH: Ratsglycogen synthase 2610 Medicine & healthBiologyMESH : Gene Expression Regulation EnzymologicCellular and Molecular NeuroscienceVoedingMESH: RNAInternal medicineMESH : MicemedicineAnimals[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyTranscription factorMESH: Micealpha ppar-alpha030304 developmental biologyNutritionDNA PrimersMESH: Glycogen SynthaseMESH: Transcription GeneticMESH : Transcription GeneticCell BiologyRatsgene transcriptionbiology.proteinHepatocytesRNAMESH : Mice KnockoutgammaMESH : Animalsmetabolism
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The IceCube prototype string in Amanda

2006

The Antarctic Muon And Neutrino Detector Array (Amanda) is a high-energy neutrino telescope. It is a lattice of optical modules (OM) installed in the clear ice below the South Pole Station. Each OM contains a photomultiplier tube (PMT) that detects photons of Cherenkov light generated in the ice by muons and electrons. IceCube is a cubic-kilometer-sized expansion of Amanda currently being built at the South Pole. In IceCube the PMT signals are digitized already in the optical modules and transmitted to the surface. A prototype string of 41 OMs equipped with this new all-digital technology was deployed in the Amanda array in the year 2000. In this paper we describe the technology and demonst…

Antarctic Muon And Neutrino Detector ArrayAstroparticle physicsPhysicsNuclear and High Energy PhysicsPhotomultiplierPhotonMuonPhysics::Instrumentation and DetectorsAstrophysics::High Energy Astrophysical PhenomenaAstrophysics (astro-ph)Neutrino telescopeAstrophysics::Instrumentation and Methods for AstrophysicsFOS: Physical sciencesAstronomyAstrophysicsNeutrino telescopeAmandaIceCubeData acquisitionSignal digitizationAmanda; IceCube; Neutrino telescope; Signal digitizationInstrumentationCherenkov radiation
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Muon track reconstruction and data selection techniques in AMANDA

2004

The Antarctic Muon And Neutrino Detector Array (AMANDA) is a high-energy neutrino telescope operating at the geographic South Pole. It is a lattice of photo-multiplier tubes buried deep in the polar ice between 1500m and 2000m. The primary goal of this detector is to discover astrophysical sources of high energy neutrinos. A high-energy muon neutrino coming through the earth from the Northern Hemisphere can be identified by the secondary muon moving upward through the detector. The muon tracks are reconstructed with a maximum likelihood method. It models the arrival times and amplitudes of Cherenkov photons registered by the photo-multipliers. This paper describes the different methods of r…

Antarctic Muon And Neutrino Detector ArrayPhysicsAMANDANuclear and High Energy PhysicsParticle physicsAMANDA; Neutrino astrophysics; Neutrino telescope; Track reconstructionMuonPhysics::Instrumentation and DetectorsAstrophysics::High Energy Astrophysical PhenomenaAstrophysics (astro-ph)DetectorFOS: Physical sciencesAstrophysicsNeutrino telescopeTrack reconstructionNeutrino astrophysicsIceCube Neutrino ObservatoryNeutrino detectorHigh Energy Physics::ExperimentMuon neutrinoNeutrinoAstrophysics - Instrumentation and Methods for AstrophysicsInstrumentation and Methods for Astrophysics (astro-ph.IM)InstrumentationLeptonNuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment
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Calibration and survey of AMANDA with the SPASE detectors

2004

We report on the analysis of air showers observed in coincidence by the Antarctic Muon and Neutrino detector array (AMANDA-B10) and the South Pole Air Shower Experiment (SPASE-1 and SPASE-2). We discuss the use of coincident events for calibration and survey of the deep AMANDA detector as well as the response of AMANDA to muon bundles. This analysis uses data taken during 1997 when both SPASE-1 and SPASE-2 were in operation to provide a stereo view of AMANDA. © 2003 Elsevier B.V. All rights reserved.

Antarctic Muon And Neutrino Detector ArrayPhysicsNuclear and High Energy PhysicsMuonDetectorAstronomyCosmic rayParticle detectorAir showerNeutrino detectorCosmic rays; Neutrino telescopesCoincidentNeutrino telescopesCosmic raysInstrumentationNuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment
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The search for Muon neutrinos from northern hemisphere gamma-ray bursts with AMANDA

2007

We present the results of the analysis of neutrino observations by the Antarctic Muon and Neutrino Detector Array (AMANDA) correlated with photon observations of more than 400 gamma-ray bursts (GRBs) in the Northern Hemisphere from 1997 to 2003. During this time period, AMANDA's effective collection area for muon neutrinos was larger than that of any other existing detector. Based on our observations of zero neutrinos during and immediately prior to the GRBs in the dataset, we set the most stringent upper limit on muon neutrino emission correlated with gamma-ray bursts. Assuming a Waxman-Bahcall spectrum and incorporating all systematic uncertainties, our flux upper limit has a normalizatio…

Antarctic Muon And Neutrino Detector ArrayPhysics::Instrumentation and DetectorsAstrophysics::High Energy Astrophysical PhenomenaFOS: Physical sciencesFluxAstrophysicsAstrophysics01 natural sciencesGamma rays: bursts; Neutrinos0103 physical sciencesMuon neutrinoNeutrinos010306 general physics010303 astronomy & astrophysicsPhysicsGamma rays: burstsMuonAstrophysics (astro-ph)Order (ring theory)Astronomy and AstrophysicsSpace and Planetary ScienceAstronomiaHigh Energy Physics::ExperimentNeutrinoGamma-ray burstEnergy (signal processing)
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A circular mesh scheme for the non-orthogonal finite difference time domain method

2002

Beam forming networks (BFN) are an important component of a complex satellite antenna system because they are used to provide accurate amplitude and phase excitation to the elements of the feed network. The need for handling high power and the need for a high degree of integrability, often leads one to choose square coaxial metal lines for constructing BFNs. BFNs usually require variable power dividers such as the rat-race (or ring) couplers with constant or variable divider ratios in order to deliver a prescribed amount of power to a certain element of an antenna array to steer the beam in a desired direction. However, modeling of such circular structures in square coaxial form is not an e…

Antenna arrayEngineeringbusiness.industryMesh generationNumerical analysisFinite difference methodFinite-difference time-domain methodElectronic engineeringCoaxialbusinessTopologySquare (algebra)Power (physics)IEEE Antennas and Propagation Society International Symposium. 1995 Digest
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Electromagnetic Sensitivity Analysis and Shape Optimization Using Method of Moments and Automatic Differentiation

2009

Sensitivity analysis is an important part of gradient-based optimization of electromagnetic devices. We demonstrate how sensitivity analysis can be incorporated into an existing in-house method of moments solver with a relatively small amount of labor by using a technique called automatic differentiation (AD). This approach enables us to obtain (geometrical) sensitivities of the discrete solution with accuracy up to numerical precision. We compare the assembly time and memory usage of the modified and original solvers. Moreover, we optimize the shape of a dipole antenna and the dimensions of a Yagi-Uda array using the presented AD technique, traditional response level finite difference sens…

Antenna arrayMathematical optimizationAutomatic differentiationFinite difference methodShape optimizationSensitivity (control systems)Electrical and Electronic EngineeringMethod of moments (statistics)SolverAlgorithmGradient methodMathematicsIEEE Transactions on Antennas and Propagation
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Dosage-dependent roles of the Cwt1 transcription factor for cell wall architecture, morphogenesis, drug sensitivity and virulence in Candida albicans.

2009

The Cwt1 transcription factor is involved in cell wall architecture of the human fungal pathogen Candida albicans. We demonstrate here that deficiency of Cwt1 leads to decreased β1,6-glucan in the cell wall, while mannoproteins are increased in the cell wall of exponentially growing cells and are released into the medium of stationary phase cells. Hyphal morphogenesis of cwt1 mutants is reduced on the surfaces of some inducing media. Unexpectedly, the CWT1/cwt1 heterozygous strains shows some stronger in vitro phenotypes compared to the homozygous mutant. The heterozygous but not the homozygous strain is also strongly impaired for its virulence in a mouse model of systemic infection. We sug…

Antifungal AgentsMutantMorphogenesisGene DosageHyphaeVirulenceBioengineeringApplied Microbiology and BiotechnologyBiochemistryMicrobiologyCell wallFungal ProteinsMiceCell WallDrug Resistance FungalGene Expression Regulation FungalCandida albicansGeneticsMorphogenesisAnimalsHumansCandida albicansDNA FungalTranscription factorOligonucleotide Array Sequence AnalysisMembrane GlycoproteinsbiologyVirulenceHomozygoteCandidiasisbiology.organism_classificationPhenotypeCorpus albicansMutationBiotechnologyTranscription FactorsYeast (Chichester, England)
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Pga13 in Candida albicans is localized in the cell wall and influences cell surface properties, morphogenesis and virulence.

2011

The fungal cell wall is an essential organelle required for maintaining cell integrity and also plays an important role in the primary interactions between pathogenic fungi and their hosts. PGA13 encodes a GPI protein in the human pathogen Candida albicans, which is highly up-regulated during cell wall regeneration in protoplasts. The Pga13 protein contains a unique tandem repeat, which is present five times and is characterized by conserved spacing between the four cysteine residues. Furthermore, the mature protein contains 38% serine and threonine residues, and therefore probably is a highly glycosylated cell wall protein. Consistent with this, a chimeric Pga13-V5 protein could be localiz…

Antifungal AgentsSurface PropertiesCellMorphogenesisHyphaeCalcofluor-whiteKidneyMicrobiologyMicrobiologyCell wallFungal ProteinsMiceCell WallStress PhysiologicalOrganelleCandida albicansGeneticsmedicineCell AdhesionAnimalsHumansAmino Acid SequenceCell adhesionCandida albicansOligonucleotide Array Sequence AnalysisSequence DeletionFungal proteinMice Inbred BALB CbiologyVirulenceGene Expression ProfilingProtoplastsCandidiasisFlocculationbiology.organism_classificationCell biologymedicine.anatomical_structureFemaleSequence AlignmentFungal genetics and biology : FGB
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Microarray analysis of antibodies induced with synthetic antitumor vaccines : specificity against diverse mucin core structures

2017

Glycoprotein research is pivotal for vaccine development and biomarker discovery. Many successful methodologies for reliably increasing the antigenicity toward tumor-associated glycopeptide structures have been reported. Deeper insights into the quality and specificity of the raised polyclonal, humoral reactions are often not addressed, despite the fact that an immunological memory, which produces antibodies with cross-reactivity to epitopes exposed on healthy cells, may cause autoimmune diseases. In the current work, three MUC1 antitumor vaccine candidates conjugated with different immune stimulants are evaluated immunologically. For assessment of the influence of the immune stimulant on a…

AntigenicityGlycosylationAntibody microarrayProtein Array AnalysisMedizin010402 general chemistry01 natural sciencesCancer VaccinesCatalysisEpitopechemistry.chemical_compoundMiceAntigenPolysaccharidesNeoplasmsAnimalsHumansMUC1Vaccines Syntheticbiology010405 organic chemistryOrganic ChemistryMucin-1GlycopeptidesGeneral ChemistryCombinatorial chemistry0104 chemical sciencesImmunity HumoralchemistryBiochemistryPolyclonal antibodiesAntibody Formationbiology.proteinAntibody
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