Search results for "Ascomycota"

showing 10 items of 82 documents

Thallus Growth Stage and Geographic Origin Shape Microalgal Diversity in Ramalina farinacea Lichen Holobionts

2021

Lichen symbioses are microecosystems hosting many other living organisms besides the two major lichen symbionts (i.e., lichenized fungi [the mycobiont] and green microalgae or cyanobacteria [the photobiont]). Recent investigations evidenced that other fungi, non-photosynthetic bacteria, and microalgae co-inhabit within the lichen thalli, but their diversity and their roles are still underinvestigated. Here we present an ad hoc stratified sampling design and in-depth Illumina paired-end metabarcoding approach to explore microalgal diversity in lichen thalli of the model species Ramalina farinacea from different ecologies. Lichen thalli were surveyed according to three different sizes, and di…

0106 biological sciencesTrebouxiaCyanobacteriasymbiosimycobiontLichensmedia_common.quotation_subjectLichenPlant ScienceAquatic Sciencehigh-throughput sequencing; metabarcoding; mycobiont; photobiont; symbiosis; Trebouxia; Symbiosis; Ascomycota; Chlorophyta; Lichens; Microalgae010603 evolutionary biology01 natural sciencesRamalina farinaceaSymbiosisAscomycotaChlorophytaBotanyMicroalgaeLichenSymbiosismedia_commonbiology010604 marine biology & hydrobiologyhigh-throughput sequencingbiology.organism_classificationThallusHabitatmetabarcodingTrebouxiaphotobiontDiversity (politics)
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The Potential Role of Medicinal Mushrooms in the Prevention and Treatment of Gynecological Cancers: A Review

2019

A review of scientific information about the potential role of medicinal mushrooms in the prevention and treatment of gynecological cancers, human immunodeficiency virus, and human papillomavirus infections is reported here. The results of in vivo and in vitro experiments on 16 different species of Basidiomycetes and three Ascomycetes, which possess chemopreventive potential and are effective in clinical application in combination with chemotherapy, are also discussed. Medicinal mushroom extracts confirm an evident efficacy on the reduction of tumor cell proliferation and side effects in patients with gynecological tumors who are undergoing chemotherapy treatments. This review, the first on…

0106 biological sciencesanimal structuresVaginal NeoplasmsGenital Neoplasms Femalemedicine.medical_treatmentHuman immunodeficiency virus (HIV)Uterine Cervical NeoplasmsTumor cellsmedicine.disease_cause01 natural sciencesApplied Microbiology and BiotechnologyAntioxidantsMiceMedicinal mushroomAscomycotaIn vivo010608 biotechnologyDrug DiscoverymedicineAnimalsHumansIn patientHuman papillomavirusPapillomaviridaeCell ProliferationPharmacologyChemotherapyBiological ProductsClinical Trials as Topicbusiness.industryBasidiomycotafungiHIVSettore BIO/03 - Botanica Ambientale E ApplicataCancer researchFemalebusinessAgaricalesmedicinal mushrooms gynecological cancers human immunodeficiency virus human papillomavirus Basidiomycetes Ascomycetes
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Lasiolactols A and B Produced by the Grapevine Fungal Pathogen Lasiodiplodia mediterranea

2016

A strain of Lasiodiplodia mediterranea, a fungus associated with grapevine decline in Sicily, produced several metabolites in liquid medium. Two new dimeric c-lactols, lasiolactols A and B (1 and 2), were characterized as (2S*,3S*,4R*,5R*,20S*,30S*,40R*,50R*)-and (2R*,3S*,4R*,5R*,20R*,30S*,40R*,50R*)-(5-(4-hydroxymethyl-3,5-dimethyl-tetrahydrofuran- 2-yloxy)-2,4-dimethyl-tetrahydro-furan-3-yl]-methanols by IR, 1D-and 2D-NMR, and HR-ESI-MS. Other four metabolites were identified as botryosphaeriodiplodin, (5R)-5-hydroxylasiodiplodin, (-)-(1R, 2R)-jasmonic acid, and (-)-(3S, 4R, 5R)-4-hydroxymethyl-3,5-dimethyldihydro-2-furanone (3 - 6, resp.). The absolute configuration (R) at hydroxylated s…

0301 basic medicineChemical structureBioengineeringFungusBiochemistryLasiodiplodia mediterranea Botryosphaeria dieback Phytotoxins Lasiolactols A and B Jasmonic acid03 medical and health scienceschemistry.chemical_compoundPhytotoxinAscomycotaBotanyVitisBotryosphaeria diebackMolecular BiologyJasmonic acidbiologyStrain (chemistry)AscomycotaChemistryMethanolJasmonic acidAbsolute configurationSettore AGR/12 - Patologia VegetaleGeneral ChemistryGeneral Medicine030108 mycology & parasitologybiology.organism_classificationHorticultureSpectrophotometryToxicityMolecular MedicinePhytotoxicityLasiodiplodia mediterraneaLasiolactols A and B
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Biofilm biodiversity in French and Swiss show caves using the metabarcoding approach: First data.

2018

International audience; In recent decades, show caves have begun to suffer from microorganism proliferation due to artificial lighting installations for touristic activity. In addition to the aesthetic problem, light encourages microorganisms that are responsible for physical and chemical degradation of limestone walls, speleothems and prehistoric paintings of cultural value. Microorganisms have previously been described by microscopy or culture-dependent methods, but data provided by new generation sequencing are rare. The authors identified, for the first time, microorganisms proliferating in one Swiss and in four French show caves using three different primers. The results showed that bo…

0301 basic medicineCyanobacteriaEnvironmental EngineeringMicroorganism030106 microbiologyConservation010501 environmental sciencesCyanobacteria01 natural sciences[ SDE ] Environmental Sciences03 medical and health sciencesCaveAlgaeAscomycotaChlorophytaBotanyMicroalgaeEnvironmental ChemistryDominance (ecology)14. Life underwaterWaste Management and DisposalIllumina dye sequencingComputingMilieux_MISCELLANEOUS0105 earth and related environmental sciencesDiatomsgeographygeography.geographical_feature_categorybiologyAscomycotaEcologyTrebouxiophyceaeBiodiversitybiology.organism_classificationPollutionMicroorganism communitiesCavesBiofilms[SDE]Environmental SciencesMetabarcodingEnvironmental PollutantsPaintingsFranceSwitzerlandThe Science of the total environment
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Environmental metabarcoding reveals contrasting microbial communities at two poplar phytomanagement sites

2016

The aim of the present study is to deepen the current understanding of the microbial communities at two poplar phytomanagement sites to reveal the environmental factors that drive the abundance, diversity and composition of microbial communities. A soil analysis revealed that the two soils displayed contrasting physico-chemical characteristics, with significant lower pH and higher Cd, Zn and Mn CaCl2-extractable fractions at Leforest site, compared with Pierrelaye site. The fungal and bacterial community profiles in the poplar roots and soils were assessed through Illumina MiSeq sequencing. Diversity indices and β-diversity measures illustrated that the root microbial communities were well …

0301 basic medicineEnvironmental EngineeringSoil test030106 microbiologyBiologyActinobacteria[ SDV.EE ] Life Sciences [q-bio]/Ecology environment03 medical and health sciencesDiversity indexMycorrhizaeBotanyEnvironmental ChemistryDominance (ecology)DNA Barcoding TaxonomicWaste Management and DisposalSoil MicrobiologyComputingMilieux_MISCELLANEOUS[SDV.EE]Life Sciences [q-bio]/Ecology environment2. Zero hungerAscomycotaBacteriaEcologyMicrobiotaAlphaproteobacteriaFungi15. Life on landbiology.organism_classificationPollutionWaste Disposal Facilities030104 developmental biologyBiodegradation EnvironmentalPopulusSoil waterFranceAcidobacteria
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Identification of factors involved in dimorphism and pathogenicity of Zymoseptoria tritici

2017

A forward genetics approach was applied in order to investigate the molecular basis of morphological transition in the wheat pathogenic fungus Zymoseptoria tritici. Z. tritici is a dimorphic plant pathogen displaying environmentally regulated morphogenetic transition between yeast-like and hyphal growth. Considering the infection mode of Z. tritici, the switching to hyphal growth is essential for pathogenicity allowing the fungus the host invasion through natural openings like stomata. We exploited a previously developed Agrobacterium tumefaciens-mediated transformation (ATMT) to generate a mutant library by insertional mutagenesis including more than 10,000 random mutants. To identify gene…

0301 basic medicineHyphal growthMutantlcsh:MedicinePlant SciencePathogenesisPathology and Laboratory MedicineDatabase and Informatics MethodsMedicine and Health Scienceslcsh:ScienceGeneticsMultidisciplinaryVirulenceOrganic CompoundsPlant Fungal PathogensFungal geneticsGenomicsGenomic DatabasesMutant StrainsChemistryPhysical SciencesResearch ArticleGene predictionGenes Fungal030106 microbiologyPlant PathogensMycologyBiologyResearch and Analysis MethodsFungal ProteinsInsertional mutagenesis03 medical and health sciencesAscomycotaGeneticsFungal GeneticsGene PredictionGeneOrganic Chemistrylcsh:ROrganismsFungiChemical CompoundsBiology and Life SciencesComputational BiologyPlant PathologyGenome AnalysisForward geneticsReverse geneticsBiological DatabasesPurinesMutationlcsh:QPLOS ONE
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Innovative Approaches Using Lichen Enriched Media to Improve Isolation and Culturability of Lichen Associated Bacteria

2016

Lichens, self-supporting mutualistic associations between a fungal partner and one or more photosynthetic partners, also harbor non-photosynthetic bacteria. The diversity and contribution of these bacteria to the functioning of lichen symbiosis have recently begun to be studied, often by culture-independent techniques due to difficulties in their isolation and culture. However, culturing as yet unculturable lichenic bacteria is critical to unravel their potential functional roles in lichen symbiogenesis, to explore and exploit their biotechnological potential and for the description of new taxa. Our objective was to improve the recovery of lichen associated bacteria by developing novel isol…

0301 basic medicinePseudevernia furfuraceaSanitizationMicroorganismlcsh:MedicineLichenologyPlant ScienceMicrobial PhysiologyMedicine and Health SciencesPublic and Occupational Healthlcsh:ScienceLichenskin and connective tissue diseasesFungicidesMultidisciplinaryintegumentary systemMicrobial Growth and DevelopmentAgricultureEquipment SterilizationThallusLaboratory EquipmentInfectious DiseasesLichenologyEngineering and TechnologyBiological CulturesAgrochemicalsResearch ArticleEquipment PreparationInfectious Disease ControlLichensNatamycin030106 microbiologyEquipmentBuffersBiologyResearch and Analysis MethodsMicrobiologyMicrobiologyRamalina farinacea03 medical and health sciencesAscomycotaSymbiosisstomatognathic systemFilter SterilizationBotanyBacteriological TechniquesBacteriaBacterial Growthlcsh:ROrganismsFungiBiology and Life Sciencesbiology.organism_classificationCulture MediaHealth CareDisinfectionstomatognathic diseases030104 developmental biologylcsh:QPreventive MedicineBacteriaDevelopmental Biology
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Inhabiting plant roots, nematodes, and truffles—polyphilus, a new helotialean genus with two globally distributed species

2018

Fungal root endophytes, including the common group of dark septate endophytes (DSEs), represent different taxonomic groups and potentially diverse life strategies. In this study, we investigated two unidentified helotialean lineages found previously in a study of DSE fungi of semiarid grasslands, from several other sites, and collected recently from a pezizalean truffle ascoma and eggs of the cereal cyst nematode Heterodera filipjevi. The taxonomic positions and phylogenetic relationships of 21 isolates with different hosts and geographic origins were studied in detail. Four loci, namely, nuc rDNA ITS1-5.8S-ITS2 (internal transcribed spacer [ITS]), partial 28S nuc rDNA (28S), partial 18S nu…

0301 basic medicineSystematicZygotePhysiologyLeotiomycetesHyaloscyphaceaeDNA RibosomalPlant Roots03 medical and health sciencesAscomycotaPhylogeneticsDNA Ribosomal SpacerRNA Ribosomal 28SBotanyRNA Ribosomal 18SGeneticsAnimalsCluster AnalysisTylenchoideaInternal transcribed spacerDNA FungalMolecular BiologyRibosomal DNAPhylogenyEcology Evolution Behavior and SystematicsComputingMilieux_MISCELLANEOUSTaxonomy[SDV.EE]Life Sciences [q-bio]/Ecology environmentHeterodera filipjeviCereal cyst nematodebiologyPhylogenetic tree3 new taxaSequence Analysis DNACell BiologyGeneral Medicine15. Life on land030108 mycology & parasitologybiology.organism_classificationEndophyteRNA Ribosomal 5.8S030104 developmental biologyHelotialesRNA Polymerase IIHyaloscyphaceaeMycologia
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Unexpected associated microalgal diversity in the lichen Ramalina farinacea is uncovered by pyrosequencing analyses

2017

The current literature reveals that the intrathalline coexistence of multiple microalgal taxa in lichens is more common than previously thought, and additional complexity is supported by the coexistence of bacteria and basidiomycete yeasts in lichen thalli. This replaces the old paradigm that lichen symbiosis occurs between a fungus and a single photobiont. The lichen Ramalina farinacea has proven to be a suitable model to study the multiplicity of microalgae in lichen thalli due to the constant coexistence of Trebouxia sp. TR9 and T. jamesii in long-distance populations. To date, studies involving phycobiont diversity within entire thalli are based on Sanger sequencing, but this method see…

0301 basic medicinelcsh:MedicineLichenologyArtificial Gene Amplification and ExtensionPlant SciencePolymerase Chain ReactionDatabase and Informatics MethodsDiversity indexMicroalgaeCluster AnalysisDNA Fungallcsh:ScienceLichenPhylogenyData ManagementMultidisciplinaryEcologybiologyEcologyPhylogenetic AnalysisBiodiversitysymbiosisThallusPhylogeneticspyrosequencingLichenologyTrebouxiaSequence AnalysisResearch ArticleTrebouxiaComputer and Information SciencesBioinformaticsSequence DatabasesReal-Time Polymerase Chain ReactionResearch and Analysis MethodslichenRamalina farinacea03 medical and health sciencesAscomycotaAlgaelichen photobionts pyrosequencing symbiosis TrebouxiaBotanyEvolutionary SystematicsMolecular Biology TechniquesMolecular BiologyDNA sequence analysisTaxonomyEvolutionary BiologyEcology and Environmental Scienceslcsh:RGenetic VariationBiology and Life SciencesSequence Analysis DNAReverse Transcriptase-Polymerase Chain Reactionbiology.organism_classificationBiological Databases030104 developmental biologyphotobiontsPyrosequencinglcsh:QSequence AlignmentPLOS ONE
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Notes on the genus Polycoccum (Ascomycota, Dacampiaceae) in Spain, with a key to the species

2003

AbstractComments on and a key to the 13 Polycoccum species known in Spain are presented, including synopses of their world distributions. Amongst these is P. rubellianae sp. nov., a lichenicolous fungus growing on thalli of Caloplaca rubelliana in eastern Spain (Valencia). It has relatively small ascomata, the lower part pale brown, and also small ascospores which are coarsely verrucose and have a thick gelatinous sheath when young. The new species is associated with a Phoma-like anamorph. The identity and systematic position of P. opulentum requires further study as the name has been applied to different species, and the occurrence of P. marmoratum in Spain is in need of confirmation. The …

AscocarpDothidealesbiologyAscomycotaGenusBotanyKey (lock)Lichenbiology.organism_classificationEcology Evolution Behavior and SystematicsCaloplacaThallusThe Lichenologist
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