Search results for "Assay"

showing 10 items of 2241 documents

Identification of Brassicadiene, a Diterpene Hydrocarbon Attractive to the Invasive Stink Bug Bagrada hilaris, from Volatiles of Cauliflower Seedling…

2020

Brassicadiene, a novel tricyclic diterpene hydrocarbon, was identified by a combination of mass spectrometry, microchemical tests, and analysis of NMR spectra. The compound constitutes >90% of the volatile organic compounds produced by cauliflower seedlings, Brassica oleracea var. botrytis. The invasive stink bug Bagrada hilaris is strongly attracted to brassicadiene, providing a mechanism for this herbivore, which specializes on cruciferous plants, to locate its hosts in a nutrient-rich and vulnerable stage.

painted bugchemistry.chemical_classificationmass spectrometry microchemical tests NMR analysis Y-olfactometer bioassaysBagrada hilarisfood.ingredientbiologyChemistrykairomoneOrganic ChemistryBrassica oleracea var botrytisbiology.organism_classificationBiochemistryditerpene hydrocarbonchemistry.chemical_compoundfoodHydrocarbonSettore AGR/11 - Entomologia Generale E ApplicataBotanyBrassica oleraceaPhysical and Theoretical ChemistryDiterpeneBotrytis
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In Vitro Cytotoxic Effect of Aqueous Extracts from Leaves and Rhizomes of the Seagrass Posidonia oceanica (L.) Delile on HepG2 Liver Cancer Cells: Fo…

2023

Aqueous extracts from Posidonia oceanica’s green and brown (beached) leaves and rhizomes were prepared, submitted to phenolic compound and proteomic analysis, and examined for their potential cytotoxic effect on HepG2 liver cancer cells in culture. The chosen endpoints related to survival and death were cell viability and locomotory behavior, cell-cycle analysis, apoptosis and autophagy, mitochondrial membrane polarization, and cell redox state. Here, we show that 24 h exposure to both green-leaf- and rhizome-derived extracts decreased tumor cell number in a dose–response manner, with a mean half maximal inhibitory concentration (IC50) estimated at 83 and 11.5 μg of dry extract/mL, respecti…

phenolic compoundreactive oxygen specieSettore CHIM/10 - Chimica Degli AlimentiGeneral Immunology and MicrobiologycaspaseSettore BIO/05 - Zoologiaproteomic analysiscell biology; cell cycle; reactive oxygen species; wound healing assay; caspases; mitochondrial transmembrane potential; clonogenic assay; phenolic compounds; proteomic analysisGeneral Biochemistry Genetics and Molecular Biologycell biologymitochondrial transmembrane potentialcell cycleclonogenic assaySettore BIO/06 - Anatomia Comparata E CitologiaGeneral Agricultural and Biological Scienceswound healing assayBiology
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Function of odorant-binding proteins in the Drosophila melanogaster chemoreception

2017

National audience; Function of odorant-binding proteins in the Drosophila [i]melanogaster[/i] chemoreception. 18. rencontre du Club de neurobiologie des invertébrés

pichia pastorisanimal structures[ SDV.AEN ] Life Sciences [q-bio]/Food and Nutritioneducationodorant-binding proteinsdrosophila melanogasterhumanitiestestingCAFÉ assay[SDV.AEN] Life Sciences [q-bio]/Food and Nutritionprotéineessaiprotein[SDV.AEN]Life Sciences [q-bio]/Food and Nutritionhuman activitiespsychological phenomena and processeshealth care economics and organizationsfluorescent binding assays
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Regulatory networks underlying mycorrhizal development delineated by genome-wide expression profiling and functional analysis of the transcription fa…

2017

Background: Ectomycorrhizal (ECM) fungi develop a mutualistic symbiotic interaction with the roots of their host plants. During this process, they undergo a series of developmental transitions from the running hyphae in the rhizosphere to the coenocytic hyphae forming finger-like structures within the root apoplastic space. These transitions, which involve profound, symbiosis-associated metabolic changes, also entail a substantial transcriptome reprogramming with coordinated waves of differentially expressed genes. To date, little is known about the key transcriptional regulators driving these changes, and the aim of the present study was to delineate and functionally characterize the trans…

polypeptidelcsh:QH426-470Transcription factors; symbiosis; secreted proteins; transcriptional activator trap assay; yeast; transcriptome; ectomycorrhiza developmentlcsh:BiotechnologyTranscription Factors/geneticslaccaria bicolorpopulusyeastectomycorrhizasecreted proteinsLaccariadéveloppement biologiquelcsh:TP248.13-248.65MycorrhizaeTranscription factorsgenomicsGene Regulatory Networkstranscriptional activator trap assayLaccaria/geneticsectomycorrhiza developmentGene Expression ProfilingMycorrhizae/geneticsfungiMicrobiology and Parasitologypseudotsuga menziesiisymbiosisMicrobiologie et Parasitologielcsh:Genetics[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyontogenyectomycorhizeTranscription factors;ectomycorrhiza development;secreted proteins;symbiosis;transcriptional activator trap assay;transcriptome;yeastsymbiosetranscriptomefacteur de transcriptionResearch Article
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DEVELOPMENT & QUALIFICATION OF BIOASSAYS FOR THE DETERMINATION OF THE BIOACTIVITY, PREDICTIVE PHARMACOKINETICS AND POTENTIAL IMMUNOGENICITY OF THERAP…

2021

The critical quality attributes of a given biotherapeutic monoclonal antibody (mAb), its molecular characterization, functional assessment and effector function analysis should be defined and profiled in detail during the life cycle of a biotherapeutic drug. In the past, this product characterization was simple and standardized. In today’s complex world of biologics, success demands a more thoughtful approach and drug developers are investing in advanced analytics much earlier in the development process. Indeed, investing in selected sophisticated and state of the art analytics in early developmental phases of a therapeutic monoclonal antibody may mitigate risks by confirming that the drug …

predictive pharmacokineticbioassaybiological activitybiotherapeutic antibodiemethod development and qualificationpotential immunogenicity.
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Rac1 protein signaling is required for DNA damage response stimulated by topoisomerase II poisons.

2012

To investigate the potency of the topoisomerase II (topo II) poisons doxorubicin and etoposide to stimulate the DNA damage response (DDR), S139 phosphorylation of histone H2AX (γH2AX) was analyzed using rat cardiomyoblast cells (H9c2). Etoposide caused a dose-dependent increase in the γH2AX level as shown by Western blotting. By contrast, the doxorubicin response was bell-shaped with high doses failing to increase H2AX phosphorylation. Identical results were obtained by immunohistochemical analysis of γH2AX focus formation, comet assay-based DNA strand break analysis, and measuring the formation of the topo II-DNA cleavable complex. At low dose, doxorubicin activated ataxia telangiectasia m…

rac1 GTP-Binding Proteinrho GTP-Binding ProteinsDNA damageAntineoplastic AgentsBiochemistryPoisonsCell LineHistonesNeoplasmsmedicineAnimalsTopoisomerase II InhibitorsDoxorubicinMolecular BiologyEtoposidebiologyCell DeathTopoisomeraseCell BiologyMolecular biologyImmunohistochemistryRatsComet assayHistoneDNA Topoisomerases Type IIDNA Topoisomerases Type Ibiology.proteinPhosphorylationTopoisomerase-II InhibitorHydroxymethylglutaryl-CoA Reductase Inhibitorsmedicine.drugDNA DamageSignal TransductionThe Journal of biological chemistry
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KOSMOS 2017 Peru Side Experiment: nutrients, phytoplankton abundances, enzyme rates, photophysiology

2022

This data was collected during an short-term incubation experiment in March 2017 that investigated the response of a surface plankton community to upwelling. This experiment was carried in the framework of the SFB754-funded KOSMOS mesocosm study that took place in La Punta, Callao, Peru between February-April 2017. A total of six different treatments were used to disentangle chemical and biological characteristics of deep water that influence surface plankton blooms: 2 different deep water sources with different nutrient concentrations; 3 treatments to distinguish the effects of inorganic nutrients, organic nutrients and deep water microbial populations. Measured variables include inorganic…

ratioDay of experimentSFB754colored dissolved organic matter at 325 nmNitriteChlorophyll aAbsorption coefficient colored dissolved organic matter at 254 nmClimate - Biogeochemistry Interactions in the Tropical Ocean (SFB754)colorimetric determinationFluorometerFluorometricNitrateNanoplanktonPhytoplankton cells phycocyanin-containing (FL-4)PicoeukaryotesFluorometer fast repetition rateCalculatedFlow cytometryNutrient consumption ratioforward scatterSynechococcusupwelling systemsMesocosm experimentSpectrophotometricClimate Biogeochemistry Interactions in the Tropical Ocean SFB754SilicateBiogeochemistryBiospheric SciencesMaximum photochemical quantum yield of photosystem IIenzyme activitycell sizeDissolved inorganic nitrogen/dissolved inorganic phosphorus ratioKOSMOS_2017chainsAbsorption coefficient colored dissolved organic matter 250 nm/365 nm ratioeastern tropical South Pacific OceanKOSMOSExcess phosphateAbsorption coefficient colored dissolved organic matter at 325 nmNatural SciencesGeosciencescolored dissolved organic matter at 254 nmphycocyanin containing FL 4Absorption coefficientPhosphateTank numberPhytoplankton cells chainsNetwork of Leading European AQUAtic MesoCOSM Facilities Connecting Mountains to Oceans from the ArctReplicatenutrientsfast repetition rateDATE TIMECryptophytesMicrophytoplanktonPhytoplankton cellsLeucine aminopeptidase activityDissolved inorganic nitrogen dissolved inorganic phosphorus ratiofungiEnzymatic assayContinuous flow analyserTreatmentDATE/TIMEcolored dissolved organic matter 250 nm 365 nmPhytoplanktonPhytoplankton cell size forward scatterNetwork of Leading European AQUAtic MesoCOSM Facilities Connecting Mountains to Oceans from the Arctic to the Mediterranean (AQUACOSM)CDOMContinuous flow analyser colorimetric determinationNitrate and Nitrite
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Biological and Proteomic Characterization of the Anti-Cancer Potency of Aqueous Extracts from Cell-Free Coelomic Fluid of Arbacia lixula Sea Urchin i…

2022

Echinoderms are an acknowledged source of bioactive compounds exerting various beneficial effects on human health. Here, we examined the potential in vitro anti-hepatocarcinoma effects of aqueous extracts of the cell-free coelomic fluid obtained from the sea urchin Arbacia lixula using the HepG2 cell line as a model system. This was accomplished by employing a combination of colorimetric, microscopic and flow cytometric assays to determine cell viability, cell cycle distribution, the possible onset of apoptosis, the accumulation rate of acidic vesicular organelles, mitochondrial polarization, cell redox state and cell locomotory ability. The obtained data show that exposed HepG2 cells under…

reactive oxygen specieSettore CHIM/10 - Chimica Degli AlimentiSettore BIO/05 - ZoologiaHepG2 cellOcean Engineeringapoptosisea urchinechinodermmitochondrial transmembrane potentialcell cycleacidic vesicular organelleSettore BIO/06 - Anatomia Comparata E Citologiacoelomic fluidcoelomic fluid; sea urchin; echinoderm; HepG2 cells; apoptosis; cell cycle; acidic vesicular organelles; mitochondrial transmembrane potential; reactive oxygen species; wound healing assaywound healing assayWater Science and TechnologyCivil and Structural EngineeringJournal of Marine Science and Engineering
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Evaluation of oleander accessions for resistance to Pseudomonas savastanoi pv. nerii

2006

Nine oleander accessions were evaluated for resistance to Pseudomonas savastanoi pv. nerii, causal agent of the oleander knot disease. None of the accessions was resistant when tested with three bacterial strains of different virulence, but they varied significantly in the severity of symptoms induced by these strains. The most susceptible accessions "Dark Salmon" (dark salmon flower) showed deformation of stems, leaves and seed pods and secondary knots on aerial parts, whereas the least susceptible one "White" (white flower), inoculated with the least virulent strain, showed neither localized knots at the inoculation point nor secondary symptoms. In this study an in vitro test, based on pr…

screening for resistancedetached leaf assaySettore AGR/12 - Patologia VegetalePlant ScienceNerium oleander; Oleander knot disease; screening for resistance; detached leaf assayNerium oleanderOleander knot disease
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Fragment‐ and Negative Image‐Based Screening of Phosphodiesterase 10A Inhibitors

2019

A novel virtual screening methodology called fragment‐ and negative image‐based (F‐NiB) screening is introduced and tested experimentally using phosphodiesterase 10A (PDE10A) as a case study. Potent PDE10A‐specific small‐molecule inhibitors are actively sought after for their antipsychotic and neuroprotective effects. The F‐NiB combines features from both fragment‐based drug discovery and negative image‐based (NIB) screening methodologies to facilitate rational drug discovery. The selected structural parts of protein‐bound ligand(s) are seamlessly combined with the negative image of the target's ligand‐binding cavity. This cavity‐ and fragment‐based hybrid model, namely its shape and electr…

skitsofreniastructure-based virtual screeningseulontaParkinsonin tautivirtual screeningfragmentnegative image based (FNiB) screeningphosphodiesterase 10A (PDE10A)schizophrenianegative image based (NIB)lääkkeetParkinson’s diseaseradiometric activity assayfragment-based drug discoveryHuntingtonin tautiHuntington’s disease
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