Search results for "Atlantic"

showing 10 items of 307 documents

DNA barcoding for species assignment: the case of Mediterranean marine fishes

2014

Background: DNA barcoding enhances the prospects for species-level identifications globally using a standardized and authenticated DNA-based approach. Reference libraries comprising validated DNA barcodes (COI) constitute robust datasets for testing query sequences, providing considerable utility to identify marine fish and other organisms. Here we test the feasibility of using DNA barcoding to assign species to tissue samples from fish collected in the central Mediterranean Sea, a major contributor to the European marine ichthyofaunal diversity. Methodology/Principal Findings: A dataset of 1278 DNA barcodes, representing 218 marine fish species, was used to test the utility of DNA barcodes…

Mediterranean climateBiophysicsSettore BIO/05 - Zoologialcsh:MedicineMarine and Aquatic SciencesMarine BiologyBiologyResearch and Analysis MethodsDNA barcodingBiochemistryBarcoding Fishes Mediterranean Sea Atlantic Ocean.Marine species diversityMediterranean seaModel OrganismsSpecies SpecificityFishes -- Mediterranean SeaPhylogeneticsMarine MonitoringNucleic AcidsMediterranean SeaAnimalsDNA Barcoding Taxonomic14. Life underwaterGenes -- Researchlcsh:SciencePhylogenyMultidisciplinaryScience & TechnologyEcologyEcologylcsh:REcology and Environmental SciencesMarine EcologyFishesMarine fishBiology and Life SciencesFisheries ScienceDNAAnimal ModelsClassificationEvolutionary biologyDna barcodesEarth Scienceslcsh:QTaxonomy (biology)Nucleotide sequenceResearch Article
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Phylogeographic patterns of decapod crustaceans at the Atlantic-Mediterranean transition.

2012

9 páginas, 4 figuras, 3 tablas.

Mediterranean climateGene FlowGenetic SpeciationBiologyOceanographic discontinuitiesPopulation structureDNA MitochondrialGene flowElectron Transport Complex IVMediterranean seaDepth distributionDecapodaGeneticsMediterranean SeaAnimalsMolecular BiologyAtlantic OceanEcology Evolution Behavior and SystematicsPhylogenymtDNAEcologyGenetic VariationLast Glacial MaximumSequence Analysis DNAbiology.organism_classificationCrustaceanPhylogeographyPhylogeographyHaplotypesGlaciationsLiocarcinus depuratorGlobal biodiversityMolecular phylogenetics and evolution
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The Pillars of Hercules as a bathymetric barrier to gene flow promoting isolation in a global deep-sea shark (Centroscymnus coelolepis).

2015

Catarino, Diana ... et. al.-- 19 pages, 5 figures, 4 tables, data accessibility http://dx.doi.org/10.5061/dryad.ss368, supporting information http://dx.doi.org/10.1111/mec.13453

Mediterranean climateGene FlowMaleGenotypePopulationMediterraneanPopulation structureDNA MitochondrialIsolationMediterranean seaCentroscymnus coelolepisGenetic driftGeneticsMediterranean SeaAnimals14. Life underwatereducationAtlantic OceanEcology Evolution Behavior and SystematicsmtDNA control regioneducation.field_of_studyPacific OceanbiologyEcologySequence Analysis DNAbiology.organism_classificationBiological EvolutionBarriers to dispersalGenetic divergenceGenetics PopulationDeep-sea sharkSharksBiological dispersalFemaleMicrosatellite RepeatsMolecular ecology
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Mediterranean circulation perturbations over the last five centuries: Relevance to past Eastern Mediterranean Transient-type events

2016

The Eastern Mediterranean Transient (EMT) occurred in the Aegean Sea from 1988 to 1995 and is the most significant intermediate-to-deep Mediterranean overturning perturbation reported by instrumental records. The EMT was likely caused by accumulation of high salinity waters in the Levantine and enhanced heat loss in the Aegean Sea, coupled with surface water freshening in the Sicily Channel. It is still unknown whether similar transients occurred in the past and, if so, what their forcing processes were. In this study, sediments from the Sicily Channel document surface water freshening (SCFR) at 1910 ± 12, 1812 ± 18, 1725 ± 25 and 1580 ± 30 CE. A regional ocean hindcast links SCFR to enhanc…

Mediterranean climateMultidisciplinary010504 meteorology & atmospheric sciencesAtmospheric circulationEMT010502 geochemistry & geophysics01 natural sciencesArticleBottom waterEastern Mediterranean TransientMediterranean seaOceanographyPaleoceanography13. Climate actionPaleoceanographyNorth Atlantic oscillationAegean SeaAtlantic multidecadal oscillationMediterranean SeacirculationThermohaline circulation14. Life underwaterPaleoceanography; Mediterranean Sea; Eastern Mediterranean transientGeology0105 earth and related environmental sciencesScientific Reports
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Nothodissotis (Melastomataceae), a new genus from Atlantic Central Africa, including the new species N. alenensis from Equatorial Guinea

2019

Based on morphological and phylogenetic evidence, a new genus of Melastomataceae (Melastomateae), Nothodissotis Veranso-Libalah & G.Kadereit, gen. nov., is described from Atlantic Central Africa. Nothodissotis is distinguished from other African Melastomateae genera by its calyx-lobes that are notched at apex and asymmetrical (vs. entire and symmetrical). Nothodissotis includes two species: the type species N.barteri (Hook.f.) Veranso-Libalah & G.Kadereit, comb. nov. (syn. Dissotisbarteri Hook.f.), and the new species N.alenensis Veranso-Libalah & O. Lachenaud, sp. nov., described and illustrated here. Both species are restricted to open vegetation on rock outcrops w…

MelastomataceaeBiodiversity & ConservationZoologyPlant ScienceBiologyphylogenyHypanthiumFloristics & DistributionMagnoliopsidaAtlantic Ocean IslandsGenuslcsh:BotanymorphologyIUCN Red ListVulnerable speciesPlantaeEcology Evolution Behavior and SystematicsMolecular systematicsTaxonomynew speciesAppendagevulnerable speciesCentral AfricaNomenclatureMyrtalesDissotisplant conservationbiology.organism_classificationlcsh:QK1-989TracheophytaType speciesMelastomataceaeAfricaEquatorial GuineaConservation statusNothodissotisResearch ArticleIdentification keyPhytoKeys
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Recent expansion of Northeast Atlantic and Mediterranean populations of Melicertus (Penaeus) kerathurus (Crustacea: Decapoda).

2009

We analysed the genetic diversity of Melicertus kerathurus (Penaeidae), a commercially valuable penaeid shrimp that is distributed in the Mediterranean Sea and eastern Atlantic Ocean. We examined the polymorphism of a 494 bp DNA segment of the mitochondrial COI region in 173 individuals, sampled in nine Mediterranean and two Atlantic samples, covering the whole range of the species from the tropical waters of the Gulf of Guinea to the eastern part of the Mediterranean Sea. The mean nucleotide and haplotype diversities were π = 0.00275 and h = 0.718, respectively, for the global data set, with the highest values occurring in the African samples and the lowest in the Adriatic Sea. A clear sam…

MelicertusMediterranean climatePenaeidaeMediterranean seabiologyDecapodaRange (biology)EcologyMelicertus kerathurusAquatic Sciencebiology.organism_classificationAtlantic Ocean COI Genetics Mediterranean Sea Melicertus kerathurus Population structure Postglacial expansionShrimp
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Tracing the first steps of American sturgeon pioneers in Europe

2008

Abstract Background A Baltic population of Atlantic sturgeon was founded ~1,200 years ago by migrants from North America, but after centuries of persistence, the population was extirpated in the 1960s, mainly as a result of over-harvest and habitat alterations. As there are four genetically distinct groups of Atlantic sturgeon inhabiting North American rivers today, we investigated the genetic provenance of the historic Baltic population by ancient DNA analyses using mitochondrial and nuclear markers. Results The phylogeographic signal obtained from multilocus microsatellite DNA genotypes and mitochondrial DNA control region haplotypes, when compared to existing baseline datasets from extan…

Mitochondrial DNAEvolutionMolecular Sequence DataPopulationZoologyBiologyDNA MitochondrialPolymerase Chain ReactionEvolution MolecularSturgeonQH359-425AnimalseducationAtlantic OceanPhylogenyEcology Evolution Behavior and Systematicseducation.field_of_studyBase SequenceChimeraFishesSequence Analysis DNAbiology.organism_classificationhumanitiesEuropePhylogeographyGenetics PopulationAncient DNAHaplotypesHabitatMicrosatelliteSequence AlignmentMicrosatellite RepeatsResearch ArticleAtlantic sturgeonBMC Evolutionary Biology
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The Stationarity of Lead-Lag Teleconnections with East Africa Rainfall and its Incidence on Seasonal Predictability

2001

East Africa experiences large interannual rainfall variations, which can lead to severe droughts, as in 1984 in Ethiopia, or extensive flooding, as in 1997 in Somalia and Kenya. In the last 15 years, significant advances have been made in relating these variations to large-scale ocean-atmosphere anomalies, of which those associated to ENSO (El Nino Southern Oscillation) come first. The additional importance of sea-surface variations in the Tropical Atlantic and Indian Oceans is becoming established. Although 20th century East African precipitation series did not experience decadal-scale trends as significant as those found in the sahelian belt, the correlation with ENSO, the Indian monsoon …

Monsoon of South AsiaGeographyIncidence (epidemiology)ClimatologyFlooding (psychology)TropicsPrecipitationPredictabilityTropical AtlanticTeleconnection
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Understanding melt generation beneath the slow-spreading Kolbeinsey Ridge using 238U, 230Th, and 231Pa excesses

2011

International audience; To examine the petrogenesis and sources of basalts from the Kolbeinsey Ridge, one of the shallowest locations along the global ridge system, we present new measurements of Nd, Sr, Hf, and Pb isotopes and U-series disequilibria on 32 axial basalts. Young Kolbeinsey basalts (full-spreading rate = 1.8 cm/yr; 67 degrees 05'-70 degrees 26'N) display ((230)Th/(238)U) 1 with ((230)Th/(238)U) from 0.95 to 1.30 and have low U (11.3-65.6 ppb) and Th (33.0 ppb-2.40 ppm) concentrations. Except for characteristic isotopic enrichment near the Jan Mayen region, the otherwise depleted Kolbeinsey basalts (e. g. (87)Sr/(86)Sr = 0.70272-0.70301, epsilon(Nd) = 8.4-10.5, epsilon(Hf) = 15…

NORWEGIAN-GREENLAND SEAU-SERIES DISEQUILIBRIA010504 meteorology & atmospheric sciences[SDE.MCG]Environmental Sciences/Global ChangesMID-ATLANTIC RIDGEGeochemistry[SDU.STU]Sciences of the Universe [physics]/Earth SciencesHETEROGENEOUS ICELAND PLUMEMid-Atlantic Ridge010502 geochemistry & geophysics01 natural sciences[SDU.STU.GC]Sciences of the Universe [physics]/Earth Sciences/GeochemistryGeochemistry and PetrologyJUAN-DE-FUCAComputingMilieux_MISCELLANEOUSTH-PA-RA0105 earth and related environmental sciencesPetrogenesisND-PB ISOTOPEPeridotiteBasaltUPWELLING RATES BENEATH[ SDU.STU ] Sciences of the Universe [physics]/Earth SciencesCrustTRACE-ELEMENT EVIDENCE[ SDU.STU.GC ] Sciences of the Universe [physics]/Earth Sciences/GeochemistryEAST PACIFIC RISE[ SDE.MCG ] Environmental Sciences/Global Changes13. Climate actionRidge (meteorology)UpwellingEclogiteGeologyGeochimica et Cosmochimica Acta
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An improved version of the Atlantic cod genome and advancements in functional genomics: implications for the future of cod farming

2016

Abstract Recent advancements within state-of-the-art genomic tools and the generation of the first version of the Atlantic cod genome (Star et al., 2011) have proven to be valuable resources, improving our understanding of this species’ biology. In this chapter we describe some aspects and implications of using these resources to identify genes and molecular pathways involved in Atlantic cod growth and development, as well as responses to nutritional changes, pathogens and other immune stimuli, and environmental stressors (e.g., temperature, stress, or pollutants). Additionally, we highlight the immunological puzzle of the Atlantic cod that lacks components of the adaptive immune system pre…

Natural selectionbiologyEcologyEvolutionary biologySystems biologyPhenotypic traitAtlantic codbiology.organism_classificationGeneGenomeFunctional genomicsLocal adaptation
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