Search results for "Axon"

showing 10 items of 2126 documents

Handbook of protocols for standardized measurement of terrestrial invertebrate functional traits

2017

Trait-based approaches are increasingly being used to test mechanisms underlying species assemblages and biotic interactions across a wide range of organisms including terrestrial arthropods and to investigate consequences for ecosystem processes. Such an approach relies on the standardized measurement of functional traits that can be applied across taxa and regions. Currently, however, unified methods of trait measurements are lacking for terrestrial arthropods and related macroinvertebrates (terrestrial invertebrates hereafter). Here, we present a comprehensive review and detailed protocol for a set of 29 traits known to be sensitive to global stressors and to affect ecosystem processes a…

0106 biological sciencesMorphologylifeRange (biology)DATABASEPhysiology[SDV]Life Sciences [q-bio]BiologyFunctional diversity010603 evolutionary biology01 natural sciencesENVIRONMENTAL-CHANGE10127 Institute of Evolutionary Biology and Environmental StudiesSpecies featuresLife-historyEcosystemBehaviourTaxonomic rankEcology Evolution Behavior and SystematicsTrophic levelInvertebrateBODY-SIZECLIMATE-CHANGE[ SDV ] Life Sciences [q-bio]Ecology010604 marine biology & hydrobiologyRESPONSE DIVERSITYFeedingLABORATORY ADAPTATIONSpecies diversity15. Life on landspecies features; species characteristics; physiology; morphology; feeding; behaviour; life-history; functional diversityTaxon1105 Ecology Evolution Behavior and SystematicsSpecies characteristicsTraitCOMMUNITY-LEVEL570 Life sciences; biology590 Animals (Zoology)historySPECIES TRAITSPLANT TRAITSFunctional Ecology
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Empirical Bayes improves assessments of diversity and similarity when overdispersion prevails in taxonomic counts with no covariates

2019

Abstract The assessment of diversity and similarity is relevant in monitoring the status of ecosystems. The respective indicators are based on the taxonomic composition of biological communities of interest, currently estimated through the proportions computed from sampling multivariate counts. In this work we present a novel method to estimate the taxonomic composition able to work even with a single sample and no covariates, when data are affected by overdispersion. The presence of overdispersion in taxonomic counts may be the result of significant environmental factors which are often unobservable but influence communities. Following the empirical Bayes approach, we combine a Bayesian mo…

0106 biological sciencesMultivariate statisticsBiological dataEmpirical Bayesian estimationEcologyTaxonomic compositionGeneral Decision SciencesEnvironmental monitoring010501 environmental sciencesBayesian inference010603 evolutionary biology01 natural sciencesBiodiversity assessment; Dirichlet-Multinomial model; Empirical Bayesian estimation; Environmental monitoring; Taxonomic compositionMarginal likelihoodBayes' theoremOverdispersionStatisticsTaxonomic rankDirichlet-Multinomial modelBiodiversity assessmentEcology Evolution Behavior and Systematics0105 earth and related environmental sciencesEmpirical Bayes methodMathematics
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A multivariate morphometric analysis of diagnostic traits in southern Italy and Sicily pubescent oaks

2020

AbstractSpecies identification within the species complex ofQ. pubescensis a well-known taxonomic challenge among European botanists. Some of the specific pubescent oak binomials currently accepted in various European floras and checklists were originally described in Sicily and southern Calabria. As a consequence, several species belonging to the pubescent oaks group (Q. pubescens,Q. amplifolia,Q. congesta,Q. dalechampii,Q. leptobalanaandQ. virgiliana) are reported in the taxonomic and phytosociological literature. To verify whether it was possible to associate a diverse set of morphological characters with each of these different taxa, thirteen natural populations of pubescent oak from Si…

0106 biological sciencesMultivariate statisticsSpecies complexdiagnostic morphological charactersdiagnostic morphological characters; nomenclature; quercus; southern Europe; taxonomyPaleontologyZoologyPlant ScienceBiology010603 evolutionary biology01 natural sciencesPlant ecologysouthern EuropetaxonomyTaxonDiagnostic morphological characters Nomenclature Quercus Southern Europe TaxonomyBotánicaTaxonomy (biology)Identification (biology)nomenclaturequercusNomenclature010606 plant biology & botany
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New insights into the enameloid microstructure of batoid fishes (Chondrichthyes)

2016

Chondrichthyan teeth are capped with a hypermineralized tissue known as enameloid. Its microstructure displays a hierarchical organization that has increased in structural complexity from a homogenous single-crystallite enameloid (SCE) in early Chondricthyans to the complex multilayered enameloid found in modern sharks (consisting of bundles of crystallites arranged in intriguing patterns). Recent analyses of the enameloid microstructure in batoid fishes, focused on Myliobatiformes and fossil taxa, point to the presence of a bundled (or fibred) multilayered enameloid, a condition proposed as plesiomorphic for Batoidea. In this work, we provide further enameloid analysis for a selection of t…

0106 biological sciencesMyliobatiformes010506 paleontologybiologySem analysisRhina ancylostomaBiodiversityEnameloidbiology.organism_classificationMicrostructure010603 evolutionary biology01 natural sciencesChondrichthyesSymplesiomorphyPaleontologyEvolutionary biologyBatoideaAnimal Science and ZoologyEcology Evolution Behavior and SystematicsTaxonomy0105 earth and related environmental sciencesZoological Journal of the Linnean Society
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<p><strong><em>Sinostoma</em> <em>yunnanicum</em>, the first nemastomatine harvestman in China (Arachnida: Opilio…

2016

The easternmost Nemastomatinae species, Sinostoma yunnanicum n. gen., n. sp., from northern Yunnan, China is described. It extends the geographic distribution of Nemastomatinae by roughly 3000 km southeastwards. Within Nemastomatinae Sinostoma displays plesiomorphic characters, including the long, basic bulb of the truncus shaft and the extremely short glans of penis, armed with short robust spines. Sinostoma may represent a relict line in the early evolution of nemastomatine harvestmen.

0106 biological sciencesNemastomatidae010607 zoologyOpilionesBiologyBody sizebiology.organism_classification010603 evolutionary biology01 natural sciencesGeographic distributionPaleontologymedicine.anatomical_structuremedicineAnimal Science and ZoologyTaxonomy (biology)ChinaGlansEcology Evolution Behavior and SystematicsPenisZootaxa
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A minimalist macroparasite diversity in the round goby of the Upper Rhine reduced to an exotic acanthocephalan lineage.

2018

AbstractThe round goby, Neogobius melanostomus, is a Ponto-Caspian fish considered as an invasive species in a wide range of aquatic ecosystems. To understand the role that parasites may play in its successful invasion across Western Europe, we investigated the parasitic diversity of the round goby along its invasion corridor, from the Danube to the Upper Rhine rivers, using data from literature and a molecular barcoding approach, respectively. Among 1666 parasites extracted from 179 gobies of the Upper Rhine, all of the 248 parasites barcoded on the c oxidase subunit I gene were identified as Pomphorhynchus laevis. This lack of macroparasite diversity was interpreted as a loss of parasites…

0106 biological sciencesNeogobiusRange (biology)Lineage (evolution)Zoology010603 evolutionary biology01 natural sciencesNucleotide diversityAcanthocephalaPomphorhynchus laevisinvasive speciesElectron Transport Complex IVNeogobius melanostomusRhine–Main–Danube corridorRiversAnimalsDNA Barcoding Taxonomic[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/Parasitology14. Life underwaterEurope EasternPhylogenyGenetic diversitybiology010604 marine biology & hydrobiologyGenetic VariationHigh-Throughput Nucleotide SequencingBiodiversitybiology.organism_classificationPerciformesInfectious DiseasesHaplotypesRound gobyMacroparasiteAnimal Science and ZoologyParasitologyPomphorhynchus laevisFranceHelminthiasis AnimalIntroduced SpeciesExotic parasite
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Can Deliberately Incomplete Gene Sample Augmentation Improve a Phylogeny Estimate for the Advanced Moths and Butterflies (Hexapoda: Lepidoptera)?

2011

Abstract This paper addresses the question of whether one can economically improve the robustness of a molecular phylogeny estimate by increasing gene sampling in only a subset of taxa, without having the analysis invalidated by artifacts arising from large blocks of missing data. Our case study stems from an ongoing effort to resolve poorly understood deeper relationships in the large clade Ditrysia ( > 150,000 species) of the insect order Lepidoptera (butterflies and moths). Seeking to remedy the overall weak support for deeper divergences in an initial study based on five nuclear genes (6.6 kb) in 123 exemplars, we nearly tripled the total gene sample (to 26 genes, 18.4 kb) but only in a…

0106 biological sciencesNonsynonymous substitutionNuclear genetaxon samplingStatistics as TopicGenes Insect010603 evolutionary biology01 natural sciencesmolecular phylogeneticsGenetic Heterogeneitymissing data03 medical and health sciencesDitrysiaGeneticsAnimalsGelechioideaPhylogenyEcology Evolution Behavior and Systematics030304 developmental biologyGenetics0303 health sciencesbiologyNucleotidesHexapodaClassificationnuclear genesbiology.organism_classificationMissing dataLepidopteragene samplingTaxonMacrolepidopteraEvolutionary biologyMolecular phylogeneticsDitrysiaRegular ArticlesSystematic Biology
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A new flatworm species of Temnocephala (Rhabdocoela, Temnocephalidae) ectosymbiont on the freshwater crab Valdivia serrata (Decapoda, Trichodactylida…

2020

A new species of temnocephalan is described from the branchial chambers ofValdivia serratain Colombia asTemnocephala ivandarioisp. nov.The most distinctive characters of the new species are in the cirrus and the epidermal ‘excretory’ syncytial plates. In the present study, the terminology to describe the cirrus of species ofTemnocephalais updated. Comparison between the shape of the cirrus of the temnocephalans associated with trichodactylid crabs is also provided.

0106 biological sciencesNot assignedTrichodactyloidearoyalty.order_of_chivalryroyaltyEubrachyuraTemnocephala01 natural sciencesEriphioideaEumalacostracataxonomyDecapodaCrustacealcsh:ZoologyBilaterialcsh:QL1-991TemnocephaloideaMalacostracaReserva Natural TanimbocabiologyDecapodaCephalornisRhabdocoelaTemnocephala ivandarioi sp. nov.Taxonomy (biology)CirrusEucaridaTemnocephalidaFreshwater crabCoelenterataResearch ArticlePortunoideaValdiviaArthropodaNephrozoa010607 zoologyProtostomiaZoologyDalytyphloplanidaTrichodactylidaeTemnocephalidaeCircumscriptional names of the taxon under010603 evolutionary biologyPolychelidaSystematicsHaplopharynx quadristimulusValdivia serrataAnimaliaEcology Evolution Behavior and SystematicsTrichodactylidaeFlatwormbiology.organism_classificationCrustaceanCyclodorippoideaRhabdocoelaNotchiaEcdysozoaAnimal Science and ZoologyPlatyhelminthesCrustacea Reserva Natural Tanimboca taxonomy Temnocephala ivandarioi sp. nov.AmericasZooKeys
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Ecological niche features override biological traits and taxonomic relatedness as predictors of occupancy and abundance in lake littoral macroinverte…

2018

The degree to which species ecological and biological traits determine their distribution and abundance has intrigued ecologists for a long time, and it has seen a revival in recent years. This topic is important because it provides information about the determinants of species rarity and their conservation implications. We examined the effects of niche breadth, niche position, biological traits and taxonomic relatedness on the interspecific occupancy–abundance relationship, as well as on occupancy and abundance, in lake littoral macroinvertebrates. We sampled 48 lakes in a boreal lake district, found altogether 155 species, and calculated regional occupancy (as the proportion of sites occu…

0106 biological sciencesOccupancyNicheBiology010603 evolutionary biology01 natural sciencesbiologiset ominaisuudettraitsAbundance (ecology)distributionLittoral zoneOccupancy–abundance relationshipEcology Evolution Behavior and SystematicsvesieläimistöEcological nichecommonality analysisEcology010604 marine biology & hydrobiologylevinneisyysInterspecific competitionselkärangattomatekologinen lokerotaxonomic relatednessHabitatta1181occupancy-abundance relationshipEcography
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Abundance–variance and abundance–occupancy relationships in a marine host–parasite system: The importance of taxonomy and ecology of transmission

2011

Abundance-occupancy and abundance-variance relationships are two of the most general macroecological patterns capturing essential fundamentals of the structuring of species distributions and are widely documented for free-living animal and plant species populations at different spatial scales. However, empirical data for parasites have been gathered using appropriate sampling designs only recently. We performed analyses across species of the variation in infection parameters and patterns of aggregation of the most widespread parasites in the marine sparid fish Boops boops across seven localities of two marine biogeographical regions, the North East Atlantic and the Mediterranean. We used a …

0106 biological sciencesOccupancyPopulationSpatial distributionModels Biological010603 evolutionary biology01 natural sciencesHost SpecificityHost-Parasite Interactions030308 mycology & parasitologyFish Diseases03 medical and health sciencesAnimalsParasitesSeawaterEcosystem14. Life underwatereducationEcosystem0303 health scienceseducation.field_of_studybiologyEcologyBoops boopsbiology.organism_classificationPerciformesSpatial heterogeneityInfectious DiseasesTaxonParasitologyTaxonomy (biology)BiologieInternational Journal for Parasitology
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