Search results for "BILAYER"

showing 10 items of 391 documents

Functional competition within a membrane: Lipid recognition vs. transmembrane helix oligomerization

2015

Abstract Binding of specific lipids to large, polytopic membrane proteins is well described, and it is clear that such lipids are crucial for protein stability and activity. In contrast, binding of defined lipid species to individual transmembrane helices and regulation of transmembrane helix monomer–oligomer equilibria by binding of distinct lipids is a concept, which has emerged only lately. Lipids bind to single-span membrane proteins, both in the juxta-membrane region as well as in the hydrophobic membrane core. While some interactions counteract transmembrane helix oligomerization, in other cases lipid binding appears to enhance oligomerization. As reversible oligomerization is involve…

Models MolecularSyntaxin 1AMembrane lipidsLipid BilayersBiophysicsBiologyBinding CompetitiveBiochemistryProtein Structure SecondaryMembrane LipidsLipid bindingOligomerizationIntegral membrane proteinC99Transmembrane channelsMolecular StructureMembrane transport proteinCell MembranePeripheral membrane proteinMembrane ProteinsCell Biologyp24Transmembrane proteinProtein Structure TertiaryCell biologyTransmembrane domainMembrane proteinMembrane proteinbiology.proteinlipids (amino acids peptides and proteins)Protein BindingBiochimica et Biophysica Acta (BBA) - Biomembranes
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Quenching of fluorescein-conjugated lipids by antibodies. Quantitative recognition and binding of lipid-bound haptens in biomembrane models, formatio…

1992

Three model biomembrane systems, monolayers, micelles, and vesicles, have been used to study the influence of chemical and physical variables of hapten presentation at membrane interfaces on antibody binding. Hapten recognition and binding were monitored for the anti-fluorescein monoclonal antibody 4–4-20 generated against the hapten, fluorescein, in these membrane models as a function of fluorescein-conjugated lipid architecture. Specific recognition and binding in this system are conveniently monitored by quenching of fluorescein emission upon penetration of fluorescein into the antibody's active site. Lipid structure was shown to play a large role in affecting antibody quenching. Interes…

Models MolecularTime FactorsProtein ConformationStereochemistry030303 biophysicsMolecular ConformationBiophysicsModels BiologicalMice03 medical and health scienceschemistry.chemical_compoundAnimalsFluoresceinBinding siteLipid bilayerMicellesPhospholipids030304 developmental biologyPhosphatidylethanolamine0303 health sciencesLiposomeVesicleCell MembraneAntibodies MonoclonalMembranes ArtificialBiological membraneFluoresceinsKineticsSpectrometry FluorescencechemistryLiposomeslipids (amino acids peptides and proteins)Binding Sites AntibodyHaptensHaptenResearch ArticleBiophysical Journal
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Insights into virus evolution and membrane biogenesis from the structure of the marine lipid-containing bacteriophage PM2.

2008

Recent, primarily structural observations indicate that related viruses, harboring no sequence similarity, infect hosts of different domains of life. One such clade of viruses, defined by common capsid architecture and coat protein fold, is the so-called PRD1-adenovirus lineage. Here we report the structure of the marine lipid-containing bacteriophage PM2 determined by crystallographic analyses of the entire approximately 45 MDa virion and of the outer coat proteins P1 and P2, revealing PM2 to be a primeval member of the PRD1-adenovirus lineage with an icosahedral shell and canonical double beta barrel major coat protein. The view of the lipid bilayer, richly decorated with membrane protein…

Models MolecularViral proteinProtein ConformationvirusesMolecular Sequence DataBiologymedicine.disease_causeCrystallography X-Ray03 medical and health sciencesProtein structuremedicineLipid bilayerMolecular Biology030304 developmental biology0303 health sciences030306 microbiologyCorticoviridaeVirionCell BiologyVirologyBiological EvolutionLipidsCell biologyBeta barrelMembrane proteinCapsidViral evolutionMembrane biogenesisVirusesCalciumCapsid ProteinsMolecular cell
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Cluster organization and pore structure of ion channels formed by beticolin 3, a nonpeptidic fungal toxin

1999

Beticolin 3 (B3) belongs to a family of nonpeptidic phytotoxins produced by the fungus Cercospora beticola, which present a broad spectrum of cytotoxic effects. We report here that, at cytotoxic concentration (10 microM), B3 formed voltage-independent, weakly selective ion channels with multiple conductance levels in planar lipid bilayers. In symmetrical standard solutions, conductance values of the first levels were, respectively, 16 +/- 1 pS, 32 +/- 2 pS, and 57 +/- 2 pS (n = 4) and so on, any conductance level being roughly twice the lower one. Whether a cluster organization of elementary channels or different channel structures underlies this particular property was addressed by investi…

Models Molecular[SDV]Life Sciences [q-bio]Lipid BilayersMolecular ConformationBiophysicsIn Vitro Techniques010402 general chemistryHeterocyclic Compounds 4 or More Rings01 natural sciencesBiophysical PhenomenaIon ChannelsMembrane Potentials03 medical and health sciencesElectrical resistivity and conductivityCluster (physics)Lipid bilayerIon channelComputingMilieux_MISCELLANEOUS030304 developmental biologyMembrane potential0303 health sciencesChemistryElectric ConductivityConductanceBiological activityMycotoxins0104 chemical sciencesCrystallographySelectivityResearch Article
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The impact of model peptides on structural and dynamic properties of egg yolk lecithin liposomes - experimental and DFT studies.

2015

Electron spin resonance (ESR), 1H-NMR, voltage and resistance experiments were performed to explore structural and dynamic changes of Egg Yolk Lecithin (EYL) bilayer upon addition of model peptides. Two of them are phenylalanine (Phe) derivatives, Ac-Phe-NHMe (1) and Ac-Phe-NMe2 (2), and the third one, Ac-(Z)-ΔPhe-NMe2 (3), is a derivative of (Z)-α,β-dehydrophenylalanine. The ESR results revealed that all compounds reduced the fluidity of liposome's membrane, and the highest activity was observed for compound 2 with N-methylated C-terminal amide bond (Ac-Phe-NMe2). This compound, being the most hydrophobic, penetrates easily through biological membranes. This was also observed in voltage an…

Models Molecularfood.ingredientBioengineeringBiochemistryLecithinlaw.inventionfoodlawLecithinsOrganic chemistryPeptide bondElectron paramagnetic resonanceMolecular BiologyLiposomeMolecular StructureChemistryBilayerBiological membraneGeneral ChemistryGeneral MedicineNuclear magnetic resonance spectroscopyEgg YolkCrystallographyMembraneLiposomesMolecular MedicineQuantum TheoryThermodynamicsPeptidesChemistrybiodiversity
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Effect of tin and lead chlorotriphenyl analogues on selected living cells.

2010

Three kinds of living cells, human embryonic kidney cells, Saccharomyces cerevisiae, and Escherichia coli, were tested for their sensitivity to chlorotriphenyltin and chlorotriphenyllead. The tin compound proved definitely more toxic than the lead derivative, particularly in the case of the human embryonic kidney cells devoid of any protective cell wall. Electron paramagnetic resonance (EPR) comparative studies carried out by using a natural model liposome system (egg yolk lecithin) confirmed considerable changes within the lipid bilayer upon doping by the aforementioned additives, which may be crucial to the mechanism of the observed cell cleavage. The individual dopants revealed diverse i…

Models Molecularfood.ingredientCell SurvivalHealth Toxicology and MutagenesisCellMolecular Conformationchemistry.chemical_elementSaccharomyces cerevisiaeToxicologyCleavage (embryo)BiochemistryLecithinCell wallfoodLecithinsmedicineEscherichia coliOrganometallic CompoundsOrganotin CompoundsHumansChlorotriphenyltinLipid bilayerMolecular BiologyLiposomeElectron Spin Resonance SpectroscopyGeneral MedicineYeastChlorotriphenylleadElectron Paramagnetic Resonancemedicine.anatomical_structureMembraneHEK293 CellsBiochemistrychemistryLeadHuman Embryonic Kidney CellsLiposomesMolecular MedicineTinJournal of biochemical and molecular toxicology
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Formation of irreversibly bound annexin A1 protein domains on POPC/POPS solid supported membranes

2008

AbstractThe specific interaction of annexin A1 with phospholipid bilayers is scrutinized by means of scanning force and fluorescence microscopy, quartz crystal microbalance, ellipsometry, and modeled by dynamic Monte Carlo simulations. It was found that POPC/POPS bilayers exhibit phase separation in POPC- and POPS-enriched domains as a function of Ca2+ concentration. Annexin A1 interacts with POPC/POPS bilayers by forming irreversibly bound protein domains with monolayer thickness on POPS-enriched nanodomains, while the attachment of proteins to the POPC-enriched regions is fully reversible. A thorough kinetic analysis of the process reveals that both, the binding constant of annexin A1 at …

Models Moleculargenetic structuresLipid BilayersBiophysicsPhospholipidAnalytical chemistryPhosphatidylserines02 engineering and technologyMicroscopy Atomic ForceBiochemistryBiophysical PhenomenaMembrane Lipids03 medical and health scienceschemistry.chemical_compoundProtein structureSFMMonolayerMicropatterned membranesAnimalsHumansPOPCMonte Carlo simulationAnnexin A1030304 developmental biologyFluorescence microscopy0303 health sciencesEllipsometrytechnology industry and agricultureCell BiologyQuartz crystal microbalanceSurface Plasmon Resonance021001 nanoscience & nanotechnologyBinding constantProtein Structure TertiaryMembraneMicroscopy FluorescencechemistryQCMPhosphatidylcholinesBiophysicsCalciumlipids (amino acids peptides and proteins)Adsorption0210 nano-technologyMonte Carlo MethodProtein BindingAnnexin A1Biochimica et Biophysica Acta (BBA) - Biomembranes
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Phospholipid and phospholipid-protein monolayers at the air/water interface.

1990

Molecular StructureAir water interfaceChemistryAirLipid BilayersPhospholipidProteinsWaterchemistry.chemical_compoundChemical engineeringMonolayerPressurePhysical and Theoretical ChemistryPhospholipidsAnnual review of physical chemistry
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Electroburning of few-layer graphene flakes, epitaxial graphene, and turbostratic graphene discs in air and under vacuum

2015

Graphene-based electrodes are very promising for molecular electronics and spintronics. Here we report a systematic characterization of the electroburning (EB) process, leading to the formation of nanometer-spaced gaps, on different types of few-layer graphene (namely mechanically exfoliated graphene on SiO2, graphene epitaxially grown on the C-face of SiC and turbostratic graphene discs deposited on SiO2) under air and vacuum conditions. The EB process is found to depend on both the graphene type and on the ambient conditions. For the mechanically exfoliated graphene, performing EB under vacuum leads to a higher yield of nanometer-gap formation than working in air. Conversely, for graphene…

Molecular spintronicsmolecular spintronicsMaterials sciencemolecular electronicsMolecular electronicsGeneral Physics and AstronomyNanotechnologylcsh:Chemical technologyEpitaxyGraphene based electrodeslcsh:TechnologyFull Research PaperGraphene; Graphene based electrodes; Molecular electronics; Molecular spintronics; Materials Science (all); Electrical and Electronic Engineering; Physics and Astronomy (all)law.inventionPhysics and Astronomy (all)lawNanotechnologylcsh:TP1-1185ddc:530General Materials ScienceElectrical and Electronic Engineeringlcsh:ScienceComputingMilieux_MISCELLANEOUSGraphene oxide paper[PHYS]Physics [physics]lcsh:TGraphenegraphene based electrodesPhysicsGraphene foamMolecular electronicslcsh:QC1-999NanoscienceElectrodelcsh:QMaterials Science (all)GrapheneBilayer graphenelcsh:PhysicsGraphene nanoribbons
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Experimental and theoretical evidence for bilayer-by-bilayer surface melting of crystalline ice

2017

On the surface of water ice, a quasi-liquid layer (QLL) has been extensively reported at temperatures below its bulk melting point at 273 K. Approaching the bulk melting temperature from below, the thickness of the QLL is known to increase. To elucidate the precise temperature variation of the QLL, and its nature, we investigate the surface melting of hexagonal ice by combining noncontact, surface-specific vibrational sum frequency generation (SFG) spectroscopy and spectra calculated from molecular dynamics simulations. Using SFG, we probe the outermost water layers of distinct single crystalline ice faces at different temperatures. For the basal face, a stepwise, sudden weakening of the hy…

MultidisciplinarySum-frequency generationMaterials scienceBilayerTransition temperatureSum frequency generationSurface meltingWaterNanotechnology02 engineering and technology010402 general chemistry021001 nanoscience & nanotechnology01 natural sciencesSpectral line0104 chemical sciencesMolecular dynamicsChemical physicsCommentariesMelting pointStepwise0210 nano-technologySpectroscopyCrystalline iceLayer (electronics)Proceedings of the National Academy of Sciences
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