Search results for "Bacteria"

showing 10 items of 4919 documents

Distinct Clones of Yersinia pestis Caused the Black Death

2010

From AD 1347 to AD 1353, the Black Death killed tens of millions of people in Europe, leaving misery and devastation in its wake, with successive epidemics ravaging the continent until the 18th century. The etiology of this disease has remained highly controversial, ranging from claims based on genetics and the historical descriptions of symptoms that it was caused by Yersinia pestis to conclusions that it must have been caused by other pathogens. It has also been disputed whether plague had the same etiology in northern and southern Europe. Here we identified DNA and protein signatures specific for Y. pestis in human skeletons from mass graves in northern, central and southern Europe that …

Yersinia pestis[SDV]Life Sciences [q-bio]Sequence HomologyDiseaseMESH: Base SequenceMESH: Genetic Markers[SHS]Humanities and Social SciencesDisease OutbreaksInfectious Diseases/Bacterial InfectionsMESH: GenotypeGenotypeMass ScreeningBiology (General)MESH: Disease OutbreaksMESH: PhylogenyCladePhylogenyGenetics0303 health sciencesMicrobiology/Microbial Evolution and GenomicsbiologyClones; Yersinia pestis; Black DeathBacterialGenetics and Genomics/Microbial Evolution and Genomics3. Good healthEuropeEvolutionary Biology/Human EvolutionInfectious DiseasesResearch ArticleDNA BacterialGenetic MarkersGenotypeQH301-705.5Molecular Sequence DataImmunologyMESH: Yersinia pestisZoologyMolecular Biology/Molecular EvolutionPlague (disease)MESH: PlagueMESH: Sequence Homology Nucleic AcidMicrobiologyNO03 medical and health sciencesPhylogeneticsSequence Homology Nucleic AcidVirologyGeneticsHumansMESH: Mass ScreeningEpidemicsMolecular BiologyMESH: EpidemicsMass screening030304 developmental biologyPlagueEvolutionary BiologyMESH: HumansMESH: Molecular Sequence DataNucleic AcidBase Sequence030306 microbiologyGenetics and GenomicsDNARC581-607biology.organism_classificationMESH: DNA BacterialYersinia pestisBase Sequence; DNA Bacterial; Disease Outbreaks; Epidemics; Europe; Genetic Markers; Genotype; Humans; Mass Screening; Molecular Sequence Data; Phylogeny; Plague; Sequence Homology Nucleic Acid; Yersinia pestisEtiologyParasitologyMESH: EuropeImmunologic diseases. Allergy
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Immunomodulatory effects of dietary β-1,3-glucan from Euglena gracilis in rainbow trout (Oncorhynchus mykiss) immersion vaccinated against Yersinia r…

2012

Abstract Potential immunostimulatory effects of orally administered β-glucan were investigated in combination with immersion vaccination against enteric redmouth disease caused by Yersinia ruckeri in rainbow trout (Oncorhynchus mykiss). A linear, unbranched and pure (purity ≥98%) β-1,3-glucan (syn. paramylon) from the alga Euglena gracilis was applied at an inclusion level of 1% β-glucan in feed administered at a rate of 1% biomass day−1 for 84 consecutive days. Fish were vaccinated after two weeks of experimental feeding and bath challenged with live Y. ruckeri six weeks post-vaccination. Blood and head kidney were sampled at day 0, 13 (1 day pre-vaccination), 15, 55, 59 (day 3 post-challe…

Yersinia ruckeribeta-GlucansYersinia InfectionsAquatic ScienceMicrobiologyAndrologyFish Diseaseschemistry.chemical_compoundImmersionAnimalsEuglena gracilisImmunologic FactorsEnvironmental ChemistrySerum amyloid AbiologyGene Expression ProfilingVaccinationEnteric redmouth diseaseAcute-phase proteinGeneral MedicineHead Kidneybiology.organism_classificationAntibodies BacterialSurvival AnalysisVaccinationstomatognathic diseasesGene Expression RegulationchemistryOncorhynchus mykissBacterial Vaccinesbiology.proteinCytokinesMuramidaseRainbow troutYersinia ruckeriAntibodyLysozymeAcute-Phase ProteinsFish & Shellfish Immunology
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Ultraviolet B Irradiation Affects Resistance of Rainbow Trout (Oncorhynchus mykiss) Against Bacterium Yersinia ruckeri and Trematode Diplostomum spat…

2007

Ultraviolet B (UVB) radiation is known to have various effects on the immune system of fish, but the effect on the actual disease resistance has remained largely unknown. Here we studied the effect of UVB on the resistance of rainbow trout (Oncorhynchus mykiss) against a bacterium Yersinia ruckeri, the causative agent of enteric red mouth disease, and a trematode parasite Diplostomum spathaceum, which causes cataracts in fish. The fish were exposed to UVB irradiation seven times in 14 days, and inoculated intraperitoneally with Y. ruckeri on day 5 after the first irradiation. On day 2 postinfection (p.i.), the number of viable bacteria in the kidney was lower in UVB-exposed than in unexpose…

Yersinia ruckeriintegumentary systembiologyUltraviolet RaysInoculationEcologyColony Count MicrobialSpleenGeneral Medicinebiology.organism_classificationBiochemistryMicrobiologymedicine.anatomical_structureImmune systemOncorhynchus mykissmedicineAnimalsParasite hostingRainbow troutTrematodaYersinia ruckeriPhysical and Theoretical ChemistryPathogenBacteriaPhotochemistry and Photobiology
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Comparative efficacy of Zataria multiflora Boiss., Origanum compactum and Eugenia caryophyllus essential oils against E. coli O157:H7, feline caliciv…

2013

Abstract Ready-to-eat salads using baby-leaf and multi-leaf mixes are one of the most promising developments in the fresh-cut food industry. There is great interest in developing novel decontamination treatments, which are both safe for consumers and more efficient against foodborne pathogens. In this study, emulsions of essential oils (EOs) from Origanum compactum (oregano), Eugenia caryophyllus (clove), and Zataria multiflora Boiss (zataria) were applied by spray (0.8 ml) after the sanitizing washing step. The aim was to investigate their ability to control the growth of potentially cross-contaminating pathogens and endogenous microbiota in commercial baby leaves, processed in a fresh-cut…

Zataria multifloraTime FactorsFood industryFood HandlingSyzygiumColony Count Microbialmedicine.disease_causeEscherichia coli O157MicrobiologyOriganum compactumMagnoliopsidaOriganumBotanyVegetablesmedicineOils VolatileFood microbiologyFood scienceEscherichia coliFeline calicivirusLamiaceaebiologybusiness.industryInoculationMicrobiotaTemperatureGeneral Medicinebiology.organism_classificationFood safetyAnti-Bacterial AgentsPlant LeavesFood MicrobiologybusinessFood ScienceCalicivirus FelineInternational journal of food microbiology
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Kinetic modelling of the Zymomonas mobilis Entner-Doudoroff pathway: insights into control and functionality.

2013

Zymomonas mobilis, an ethanol-producing bacterium, possesses the Entner-Doudoroff (E-D) pathway, pyruvate decarboxylase and two alcohol dehydrogenase isoenzymes for the fermentative production of ethanol and carbon dioxide from glucose. Using available kinetic parameters, we have developed a kinetic model that incorporates the enzymic reactions of the E-D pathway, both alcohol dehydrogenases, transport reactions and reactions related to ATP metabolism. After optimizing the reaction parameters within likely physiological limits, the resulting kinetic model was capable of simulating glycolysis in vivo and in cell-free extracts with good agreement with the fluxes and steady-state intermediate …

ZymomonasbiologyEthanolATPaseAlcohol DehydrogenaseGene Expression Regulation BacterialCarbon Dioxidebiology.organism_classificationMicrobiologyZymomonas mobilisModels BiologicalMetabolic engineeringAdenosine TriphosphateGlucoseBiochemistrybiology.proteinGlycolysisComputer SimulationEthanol metabolismEntner–Doudoroff pathwayPyruvate DecarboxylasePyruvate decarboxylaseMetabolic Networks and PathwaysAlcohol dehydrogenaseMicrobiology (Reading, England)
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The presence of conifer resin decreases the use of the immune system in wood ants.

2008

5 pages; International audience; 1. Wood ants ( Formica paralugubris ) incorporate large amounts of solidified conifer resin into their nest, which reduces the density of many bacteria and fungi and protects the ants against some detrimental micro-organisms. By inducing an environment unfavourable to pathogens, the presence of resin may allow workers to reduce the use of their immune system. 2. The present study tested the hypothesis that the presence of resin decreases the immune activity of wood ants. Specifically, three components of the humoral immune defences of workers kept in resin-rich and resin-free experimental nests (antibacterial, lytic, and prophenoloxidase activities) were com…

[ SDV.BA.ZI ] Life Sciences [q-bio]/Animal biology/Invertebrate ZoologyFormica paralugubrisBiologyFormica paralugubrisMicrobiologyImmune systemNestImmunityBotany[ SDV.IMM ] Life Sciences [q-bio]/Immunologyantibacterial activity; Formica paralugubris; immunity; lytic activity; medication; plant secondary metabolites; prophenoloxidaseEcologyprophenoloxidasetechnology industry and agriculturelytic activityProphenoloxidasebiochemical phenomena metabolism and nutritionbiology.organism_classificationimmunityplant secondary metabolitesLytic cycleInsect SciencemedicationAntibacterial activityAntibacterial activityBacteria
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Seasonal fluctuations and long-term persistence of pathogenic populations of Agrobacterium spp. in soils.

2002

ABSTRACT Short- and long-term persistence of pathogenic (i.e., tumor forming) agrobacteria in soil was investigated in six nursery plots with a history of high crown gall incidence. No pathogenic Agrobacterium strains were isolated in soil samples taken in fall and winter in any plots, but such strains were isolated from both bulk soils and weed rhizospheres (over 0.5 × 10 5 pathogenic CFU/g of bulk soil or rhizosphere) in three out of six plots in spring and summer. PCR amplifications of a vir sequence from DNA extracted from soil confirmed the presence of Ti plasmids in summer and their absence in fall and winter. The results indicate that strains that harbor a Ti plasmid had an unforesee…

[ SDV.BV ] Life Sciences [q-bio]/Vegetal BiologyBiovarApplied Microbiology and BiotechnologyPolymerase Chain ReactionTi plasmidchemistry.chemical_compoundPlant MicrobiologyMESH : EcosystemMESH : DNA BacterialMESH: EcosystemMESH : Polymerase Chain ReactionComputingMilieux_MISCELLANEOUSSoil Microbiology2. Zero hungerOctopine[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesRhizosphereeducation.field_of_studyEcologybiologyBacterialHorticulture[SDV.EE] Life Sciences [q-bio]/Ecology environmentPOUVOIR PATHOGENESeasonsSoil microbiologyBiotechnologyPlasmidsRhizobiumMESH: RhizobiumDNA BacterialAgrobacteriumPopulationMESH : Soil MicrobiologyBulk soilMESH : Rhizobium03 medical and health sciencesMESH: PlasmidsBotany[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyeducationEcosystem030304 developmental biologyMESH : Seasons030306 microbiologyMESH: Polymerase Chain ReactionDNAbiology.organism_classificationMESH: DNA BacterialchemistryMESH: Soil MicrobiologyMESH : PlasmidsMESH: SeasonsFood Science
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Acyl-homoserine lactone production is more common among plant-associated Pseudomonas spp. than among soilborne Pseudomonas spp.

2001

ABSTRACT A total of 137 soilborne and plant-associated bacterial strains belonging to different Pseudomonas species were tested for their ability to synthesize N -acyl-homoserine lactones (NAHL). Fifty-four strains synthesized NAHL. Interestingly, NAHL production appears to be more common among plant-associated than among soilborne Pseudomonas spp. Indeed, 40% of the analyzed Pseudomonas syringae strains produced NAHL which were identified most often as the short-chain NAHL, N -hexanoyl- l -homoserine lactone, N -(3-oxo-hexanoyl)-homoserine lactone, and N -(3-oxo-octanoyl)- l -homoserine lactone (no absolute correlation between genomospecies of P. syringae and their ability to produce NAHL …

[ SDV.BV ] Life Sciences [q-bio]/Vegetal BiologyMESH: Sequence Analysis DNAMESH : Molecular Sequence DataMESH: PlantsMESH: Amino Acid SequenceErwiniaMESH: Base SequenceApplied Microbiology and Biotechnologychemistry.chemical_compoundPlant MicrobiologyMESH: Plant Diseases4-ButyrolactoneChromobacteriumPseudomonas syringaeMESH : Bacterial ProteinsMESH : DNA BacterialCloning MolecularMESH: Bacterial ProteinsComputingMilieux_MISCELLANEOUSSoil Microbiology[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesMESH: Gene Expression Regulation BacterialMESH: Genetic Complementation TestEcologybiologyMESH : Amino Acid SequenceMESH : Plant DiseasesPseudomonasBacterialMESH : 4-ButyrolactonePlantsN-ACYL-HOMOSERINE LACTONE[SDV.EE] Life Sciences [q-bio]/Ecology environmentPseudomonadalesSequence AnalysisBiotechnologyPseudomonadaceaeMESH : Gene Expression Regulation BacterialDNA BacterialMESH : Cloning MolecularMESH : Soil MicrobiologyCarbon-Oxygen LyasesMolecular Sequence DataHomoserineMESH : PlantsMicrobiologyMESH: Carbon-Oxygen Lyases03 medical and health sciencesBacterial ProteinsPseudomonas[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyMESH: Cloning MolecularAmino Acid SequenceMESH : Carbon-Oxygen Lyases030304 developmental biologyPlant DiseasesMESH: Molecular Sequence DataMESH : Genetic Complementation TestBase Sequence030306 microbiologyPantoeaGenetic Complementation TestMolecularMESH: PseudomonasGene Expression Regulation BacterialSequence Analysis DNADNAbiology.organism_classificationMESH: DNA BacterialchemistryGene Expression RegulationMESH: Soil MicrobiologyMESH: 4-ButyrolactoneMESH : Base SequenceFood ScienceMESH : PseudomonasMESH : Sequence Analysis DNACloning
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Depth matters : Effects of precipitation regime on soil microbial activity upon rewetting of a plant-soil system

2018

International audience; Climate change is predicted to affect not only the amount but also the temporal distribution of rain. Changes in frequency and amplitude of rain events, i.e. precipitation patterns, result in different water conditions with soil depth, and likely affect plant growth and shape plant and soil microbial activity. Here, we used 18O stable isotope probing (SIP) to investigate bacterial and fungal communities that actively grew or not upon rewetting, at three different depths in plant-soil mesocosms previously subjected to frequent or infrequent watering for 12 weeks (equal total water input). Phylogenetic marker genes for bacteria and fungi were sequenced after rewetting,…

[SDE] Environmental Sciences0301 basic medicineBiogeochemical cycleRain[SDV]Life Sciences [q-bio]Stable-isotope probingPlant DevelopmentBiologyMicrobiologyArticleprecipitation legacyMesocosmSoil03 medical and health sciencesdry-wetMicrobial ecologyAbundance (ecology)[SDV.BV]Life Sciences [q-bio]/Vegetal Biology[SDV.BV] Life Sciences [q-bio]/Vegetal BiologyPrecipitationPhylogenySoil MicrobiologyEcology Evolution Behavior and Systematicsplant-soil interactionsTopsoilBacteriaFungi04 agricultural and veterinary sciences15. Life on land[SDV] Life Sciences [q-bio]030104 developmental biologyAgronomy13. Climate action[SDE]Environmental Sciences040103 agronomy & agriculture0401 agriculture forestry and fisheriesSoil horizonmicrobial community
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Natural soil reservoirs for human pathogenic and fecal indicator bacteria

2015

Prod ? EA UB INRA BIOME; International audience; résumé du livre : Environmental microbiology, the study of the roles that microbes play in all planetary environments, is one of the most important areas of scientific research. The The Manual of Environmental Microbiology, Fourth Edition, provides comprehensive coverage of this critical and growing field. Thoroughly updated and revised, the Manuall is the definitive reference for information on microbes in air, water, and soil and their impact on human health and welfare. Written in accessible, clear prose, the manual covers four broad areas: general methodologies, environmental public health microbiology, microbial ecology, and biodegradati…

[SDE] Environmental Sciences16 rRNA Sequencinghuman pathogenic bacteria[SDV]Life Sciences [q-bio]Indicator bacteriamultilocus sequence typingBiologySoil management03 medical and health sciences[SDV.BV]Life Sciences [q-bio]/Vegetal Biology[SDV.BV] Life Sciences [q-bio]/Vegetal BiologyFeces030304 developmental biology0303 health sciences[ SDV ] Life Sciences [q-bio]030306 microbiologybusiness.industryEcologymassive parallel sequencing15. Life on landbiology.organism_classification6. Clean waterBiotechnologyWater resources[SDV] Life Sciences [q-bio]13. Climate actionAgricultureSoil water[SDE]Environmental SciencesbusinessBacteriaSludge
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