Search results for "Bacterial pathogen"

showing 10 items of 54 documents

Culture and Real-time Polymerase Chain reaction sensitivity in the diagnosis of invasive meningococcal disease: Does culture miss less severe cases?

2019

BackgroundInvasive meningococcal disease (IMD) is a highly lethal disease. Diagnosis is commonly performed by culture or Realtime-PCR (qPCR).AimsOur aim was to evaluate, retrospectively, whether culture positivity correlates with higher bacterial load and fatal outcome. Our secondary aim was to compare culture and qPCR sensitivity.MethodsThe National Register for Molecular Surveillance was used as data source. Cycle threshold (CT), known to be inversely correlated with bacterial load, was used to compare bacterial load in different samples.ResultsThree-hundred-thirteen patients were found positive for Neisseria meningitidis by qPCR, or culture, or both; 41 died (case fatality rate 13.1%); 1…

Bacterial DiseasesMale0301 basic medicinePhysiologyAntibioticsCell Culture TechniquesMeningococcal DiseaseNeisseria meningitidisPathology and Laboratory Medicinemedicine.disease_causeNervous SystemSeverity of Illness IndexGastroenterology0302 clinical medicineCerebrospinal fluidAntibioticsInfectious Diseases of the Nervous SystemBiochemistry Genetics and Molecular Biology (all); Agricultural and Biological Sciences (all)Case fatality rateMedicine and Health Sciences030212 general & internal medicineChildFalse Negative ReactionsCerebrospinal FluidMultidisciplinaryAntimicrobialsNeisseria meningitidisQRDrugsBody FluidsBacterial PathogensBloodInfectious DiseasesReal-time polymerase chain reactionNeurologyMedical MicrobiologyChild PreschoolMedicineFemaleAnatomyPathogensNeisseriaMeningitisResearch ArticleDNA Bacterialmedicine.medical_specialtyAdolescentmedicine.drug_classScienceInflammatory Diseases030106 microbiologyMeningitis MeningococcalReal-Time Polymerase Chain ReactionMeningococcal diseaseMicrobiologySensitivity and SpecificitySepsisYoung Adult03 medical and health sciencesSigns and SymptomsDiagnostic MedicineMicrobial ControlSepsisInternal medicinemedicineHumansMeningitisMicrobial PathogensRetrospective StudiesPharmacologyBacteriabusiness.industryOrganismsInfant NewbornBiology and Life SciencesInfantmedicine.diseaseBacterial Loadbusiness
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Stimulated and unstimulated saliva samples have significantly different bacterial profiles

2018

Epidemiological studies use saliva on a regular basis as a non-invasive and easy-to-take sample, which is assumed to be a microbial representative of the oral cavity ecosystem. However, comparative studies between different kinds of saliva samples normally used in microbial studies are scarce. The aim of the current study was to compare oral microbiota composition between two different saliva samples collected simultaneously: non-stimulated saliva with paper points and stimulated saliva collected after chewing paraffin gum. DNA was extracted from saliva samples of ten individuals, then analyzed by 16S rRNA pyrosequencing to describe bacterial diversity. The results demonstrate significant d…

Bacterial DiseasesMale0301 basic medicineSalivaPhysiologylcsh:MedicineMicrobiologiaPathology and Laboratory MedicineOral cavityDatabase and Informatics Methodsfluids and secretions0302 clinical medicineOral DiseasesCariesMedicine and Health SciencesFood sciencelcsh:ScienceChildMultidisciplinaryGenomicsBody FluidsBacterial PathogensInfectious Diseasesmedicine.anatomical_structureMedical MicrobiologyParaffinFemaleAnatomyPathogensSequence AnalysisResearch ArticleAdolescentBioinformaticsOral MedicineSequence DatabasesMicrobial GenomicsBiologyResearch and Analysis MethodsDental plaqueMicrobiologyBuccal mucosa03 medical and health sciencesOral Microbiotastomatognathic systemTongueGeneticsmedicineHumansEpidemiologiaSalivaMicrobial PathogensBacteriaBocalcsh:ROrganismsBiology and Life SciencesStreptococcus030206 dentistrymedicine.disease16S ribosomal RNAstomatognathic diseasesBiological Databases030104 developmental biologyEstomatologiaPyrosequencinglcsh:QMicrobiomePLOS ONE
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Importance of Propionibacterium acnes hemolytic activity in human intervertebral discs: A microbiological study

2018

Most patients with chronic lower back pain (CLBP) exhibit degenerative disc disease. Disc specimens obtained during initial therapeutic discectomies are often infected/colonized with Propionibacterium acnes, a Gram-positive commensal of the human skin. Although pain associated with infection is typically ascribed to the body's inflammatory response, the Gram-positive bacterium Staphylococcus aureus was recently observed to directly activate nociceptors by secreting pore-forming α-hemolysins that disrupt neuronal cell membranes. The hemolytic activity of P. acnes in cultured disc specimens obtained during routine therapeutic discectomies was assessed through incubation on sheep-blood agar. T…

Bacterial DiseasesSensory ReceptorsPhysiologyStaphylococcusCellSocial SciencesHuman skinmedicine.disease_causePathology and Laboratory MedicineToxicologyMass SpectrometryAnalytical ChemistryPathogenesis0302 clinical medicineSpectrum Analysis TechniquesINFECTIONMedicine and Health SciencesNERVEAgarToxinsPsychologyStaphylococcus AureusIntervertebral DiscPOPULATIONMammals030222 orthopedicsMultidisciplinarybiologyQSTAPHYLOCOCCUSREukaryotaNociceptorsASSOCIATIONMatrix-Assisted Laser Desorption Ionization Mass SpectrometryRuminantsPREVALENCE3. Good healthBody FluidsBacterial PathogensChemistrymedicine.anatomical_structureBloodInfectious DiseasesStaphylococcus aureusMedical MicrobiologyPhysical SciencesVertebratesMedicineSensory PerceptionAnatomyPathogensLOW-BACK-PAINResearch ArticleSignal Transductionfood.ingredientScienceLower Back PainToxic AgentsPainResearch and Analysis MethodsMicrobiologyHemolysisDegenerative disc diseaseMicrobiology03 medical and health sciencesPropionibacterium acnesfoodSigns and SymptomsDiagnostic MedicinemedicineAnimalsHumansPropionibacterium acnesMicrobial PathogensStaphylococcal InfectionGram-Positive Bacterial InfectionsINNERVATIONSheepBacteriabusiness.industryOrganismsBiology and Life SciencesCell Biologymedicine.diseasebiology.organism_classificationAmniotesChronic DiseasebusinessLow Back Pain030217 neurology & neurosurgeryBacteriaNeurosciencePLoS ONE
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High level of intrinsic phenotypic antimicrobial resistance in enterobacteria from terrestrial wildlife in Gabonese national parks.

2021

Data on the prevalence of antibiotic resistance in Enterobacteriaceae in African wildlife are still relatively limited. The aim of this study was to estimate the prevalence of phenotypic intrinsic and acquired antimicrobial resistance of enterobacteria from several species of terrestrial wild mammals in national parks of Gabon. Colony culture and isolation were done using MacConkey agar. Isolates were identified using the VITEK 2 and MALDI-TOF methods. Antibiotic susceptibility was analysed and interpreted according to the European Committee on Antimicrobial Susceptibility Testing guidelines. The preliminary test for ESBL-producing Enterobacteriaceae was performed by replicating enterobacte…

CefotaximeKlebsiella pneumoniaeParks RecreationalSocial SciencesWildlifePathology and Laboratory MedicineKlebsiella Pneumoniaechemistry.chemical_compoundFecesKlebsiellaMedicine and Health SciencesPrevalencePsychologyMammalsMultidisciplinarybiologyAnimal BehaviorQEnterobacteriaceae InfectionsREukaryotaCitrobacter freundiiBacterial PathogensAnti-Bacterial AgentsPhenotypeMedical MicrobiologyAnimal SocialityVertebratesApesMedicinePathogensMandrillusMacConkey agarKlebsiella Oxytocamedicine.drugResearch ArticlePrimatesGorillasScienceAnimals WildMicrobial Sensitivity TestsProteus Mirabilisbeta-LactamsKlebsiella variicolaMicrobiologybeta-Lactam Resistancebeta-LactamasesMicrobiologyEnterobacteriaceaeMicrobial ControlEnterobacter cloacaemedicineEscherichia coliAnimalsGabonMicrobial PathogensPharmacologyBehaviorGorilla gorillaBacteriaOrganismsBiology and Life SciencesKlebsiella oxytocabiology.organism_classificationProteus mirabilischemistryAntibiotic ResistanceAmniotesbacteriaAntimicrobial ResistanceEnterobacter cloacaeZoologyPLoS ONE
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The rise and the fall of a Pseudomonas aeruginosa endemic lineage in a hospital

2021

The biological features that allow a pathogen to survive in the hospital environment are mostly unknown. The extinction of bacterial epidemics in hospitals is mostly attributed to changes in medical practice, including infection control, but the role of bacterial adaptation has never been documented. We analysed a collection of Pseudomonas aeruginosa isolates belonging to the Besançon Epidemic Strain (BES), responsible for a 12year nosocomial outbreak, using a genotype-to-phenotype approach. Bayesian analysis estimated the emergence of the clone in the hospital 5 years before its opening, during the creation of its water distribution network made of copper. BES survived better than the refe…

DNA Bacterialparallel evolutionLineage (genetic)Genomic IslandsPathogens and EpidemiologyBiologymedicine.disease_causeAmoeba (operating system)Disease OutbreaksMicrobiology03 medical and health sciencesAntibiotic resistanceDrug Resistance Multiple BacterialGenomic islandbacterial pathogensmedicineHumansPseudomonas InfectionsPathogenGenome size[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologyResearch Articles030304 developmental biology0303 health sciencesoutbreak030306 microbiologyPseudomonas aeruginosahigh-risk cloneOutbreakBayes TheoremSequence Analysis DNAGeneral MedicineHospitals3. Good healthPhenotype[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyPseudomonas aeruginosa
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High temperature and bacteriophages can indirectly select for bacterial pathogenicity in environmental reservoirs

2010

The coincidental evolution hypothesis predicts that traits connected to bacterial pathogenicity could be indirectly selected outside the host as a correlated response to abiotic environmental conditions or different biotic species interactions. To investigate this, an opportunistic bacterial pathogen, Serratia marcescens, was cultured in the absence and presence of the lytic bacteriophage PPV (Podoviridae) at 25°C and 37°C for four weeks (N = 5). At the end, we measured changes in bacterial phage-resistance and potential virulence traits, and determined the pathogenicity of all bacterial selection lines in the Parasemia plantaginis insect model in vivo. Selection at 37°C increased bacterial…

Disease reservoirHot TemperatureMovementlcsh:MedicineVirulenceMothsMicrobiologyMicrobial EcologyMicrobiologyBacteriophage03 medical and health sciencesEnvironmental MicrobiologyAnimalslcsh:ScienceBiologyPathogenSerratia marcescens1183 Plant biology microbiology virologyDisease Reservoirs030304 developmental biologyAbiotic componentEvolutionary Biology0303 health sciencesMultidisciplinaryBiotic componentEcologybiology030306 microbiologylcsh:RPodoviridaebiology.organism_classificationBiological EvolutionSurvival AnalysisBacterial PathogensLytic cycleEvolutionary EcologyLarvaHost-Pathogen InteractionsMicrobial Evolutionlcsh:QBacteriaResearch Article
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Genetic Characterization of Legionella pneumophila Isolated from a Common Watershed in Comunidad Valenciana, Spain

2013

Legionella pneumophila infects humans to produce legionellosis and Pontiac fever only from environmental sources. In order to establish control measures and study the sources of outbreaks it is essential to know extent and distribution of strain variants of this bacterium in the environment. Sporadic and outbreak-related cases of legionellosis have been historically frequent in the Comunidad Valenciana region (CV, Spain), with a high prevalence in its Southeastern-most part (BV). Environmental investigations for the detection of Legionella pneumophila are performed in this area routinely. We present a population genetics study of 87 L. pneumophila strains isolated in 13 different localities…

Evolutionary GeneticsBacterial DiseasesPopulation geneticslcsh:MedicineLocus (genetics)Legionella pneumophilaMicrobiologyMicrobial EcologyLegionella pneumophilaIntergenic regionGenetic variationmedicineNatural SelectionGeneticsGram Negativelcsh:ScienceBiologyMicrobial PathogensGeneticsRecombination GeneticGenetic diversityEvolutionary BiologyMultidisciplinaryLegionellosisbiologyEcologyEcologyPontiac feverlcsh:ROutbreakGenetic Variationbiology.organism_classificationmedicine.diseaseBacterial PathogensInfectious DiseasesSpainMicrobial EvolutionGenetic PolymorphismMedicinelcsh:QWater MicrobiologySequence AnalysisPopulation GeneticsResearch ArticlePLoS ONE
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Life History Trade-Offs and Relaxed Selection Can Decrease Bacterial Virulence in Environmental Reservoirs

2012

Pathogen virulence is usually thought to evolve in reciprocal selection with the host. While this might be true for obligate pathogens, the life histories of opportunistic pathogens typically alternate between within-host and outside-host environments during the infection-transmission cycle. As a result, opportunistic pathogens are likely to experience conflicting selection pressures across different environments, and this could affect their virulence through life-history trait correlations. We studied these correlations experimentally by exposing an opportunistic bacterial pathogen Serratia marcescens to its natural protist predator Tetrahymena thermophila for 13 weeks, after which we meas…

Food ChainEvolutionary ProcessesScienceVirulenceParallel EvolutionPathogenesisEnvironmentBiologyForms of EvolutionMicrobiologyDivergent EvolutionTetrahymena thermophilaMicrobial Ecology03 medical and health sciencesNatural Selectionexperimental evolutionSelection GeneticAdaptationBiologyMicrobial PathogensPathogenSerratia marcescensSelection (genetic algorithm)030304 developmental biologyGeneticsEvolutionary Biology0303 health sciencesMultidisciplinaryEcologyObligate030306 microbiologyHost (biology)Mechanism (biology)QRAdaptation PhysiologicalBiological EvolutionBacterial PathogensvirulenceEvolutionary EcologyMicrobial EvolutionBacterial pigmentMedicineta1181AdaptationResearch ArticlePLoS ONE
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In silico identification and experimental validation of hits active against KPC-2 β-lactamase

2018

Bacterial resistance has become a worldwide concern, particularly after the emergence of resistant strains overproducing carbapenemases. Among these, the KPC-2 carbapenemase represents a significant clinical challenge, being characterized by a broad substrate spectrum that includes aminothiazoleoxime and cephalosporins such as cefotaxime. Moreover, strains harboring KPC-type β-lactamases are often reported as resistant to available β-lactamase inhibitors (clavulanic acid, tazobactam and sulbactam). Therefore, the identification of novel non β-lactam KPC-2 inhibitors is strongly necessary to maintain treatment options. This study explored novel, non-covalent inhibitors active against KPC-2, …

Genetics and Molecular Biology (all)Proteomics0301 basic medicineCefotaximeKlebsiella pneumoniaePathology and Laboratory MedicinePhysical ChemistryBiochemistryKlebsiella PneumoniaeDatabase and Informatics MethodsBiochemistry Genetics and Molecular Biology (all); Agricultural and Biological Sciences (all)AntibioticsKlebsiellaCatalytic DomainMedicine and Health Sciencespolycyclic compoundsDrug InteractionsCrystallographyMultidisciplinarybiologyAntimicrobialsOrganic CompoundsProteomic DatabasesChemistryPhysicsQRDrugsSulbactamCondensed Matter PhysicsBacterial PathogensChemistryBiochemistryMedical MicrobiologyPhysical SciencesCrystal StructureMedicinePathogensbeta-Lactamase InhibitorsResearch Articlemedicine.drugScienceIn silico030106 microbiologySulfonamideResearch and Analysis MethodsMicrobiologyMeropenemTazobactambeta-Lactamases03 medical and health sciencesBacterial ProteinsMicrobial ControlClavulanic acidmedicineSolid State PhysicsMicrobial PathogensPharmacologyLigand efficiencyChemical BondingBacteriaOrganic ChemistryChemical CompoundsOrganismsBiology and Life SciencesHydrogen Bondingbiochemical phenomena metabolism and nutritionbiology.organism_classificationbacterial infections and mycosesAmidesBiological Databases030104 developmental biologyAgricultural and Biological Sciences (all)
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Phage-driven loss of virulence in a fish pathogenic bacterium

2012

Parasites provide a selective pressure during the evolution of their hosts, and mediate a range of effects on ecological communities. Due to their short generation time, host-parasite interactions may also drive the virulence of opportunistic bacteria. This is especially relevant in systems where high densities of hosts and parasites on different trophic levels (e.g. vertebrate hosts, their bacterial pathogens, and virus parasitizing bacteria) co-exist. In farmed salmonid fingerlings, Flavobacterium columnare is an emerging pathogen, and phage that infect F. columnare have been isolated. However, the impact of these phage on their host bacterium is not well understood. To study this, four s…

Gliding motilityPathogenesisAquacultureFish DiseasesFlavobacteriaceae InfectionsSalmonphageBacteriophagesPathogenZebrafishGliding motility0303 health sciencesEvolutionary TheoryMultidisciplinarybiologyEcologyVirulenceQRFishesvirulenssiAnimal ModelsBiological EvolutionBacterial PathogensHost-Pathogen InteractionLytic cycleMedicineResearch ArticleScienceVirulenceMicrobiologyFlavobacteriumMicrobiologyMicrobial EcologyHost-Parasite Interactions03 medical and health sciencesModel OrganismsVirologyAnimals14. Life underwaterBiology030304 developmental biologyEvolutionary Biology030306 microbiologyHost (biology)ta1182biology.organism_classificationEvolutionary Ecologyphage resistanceFlavobacterium columnareVirulence Factors and Mechanismsta1181BacteriaFlavobacteriumopportunismi
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