Search results for "Bacterial"

showing 10 items of 3246 documents

Inactivation of the ftsH gene of Lactobacillus plantarum WCFS1: Effects on growth, stress tolerance, cell surface properties and biofilm formation

2012

FtsH proteins are ubiquitous membrane-bound, ATP-dependent metalloproteases of the AAA family. In eubacteria, FtsH is involved in protein quality control under stress conditions. Lactobacillus plantarum is a widespread lactic acid bacterium that is encountered in several fermented food, including dairy products, vegetables and meat. In the present work the expression of the ftsH gene of L. plantarum was studied by quantitative real time RT-PCR in bacterial cultures subjected to various abiotic stresses. Both oxidative stress and addition of a membrane-fluidizing agent induced ftsH transcription, while a depletion of carbon-source repressed its mRNA level. Mutants deprived of the FtsH protea…

Surface Propertiesmedicine.medical_treatmentMutantReal-Time Polymerase Chain Reactionmedicine.disease_causeMicrobiologyMicrobiologyATP-Dependent ProteasesBacterial ProteinsStress PhysiologicalTranscription (biology)medicineGeneProteasebiologyReverse Transcriptase Polymerase Chain ReactionGene Expression ProfilingTemperatureBiofilmbiology.organism_classificationBiochemistryBiofilmsSaltsProtein qualityGene DeletionLactobacillus plantarumOxidative stressLactobacillus plantarumMicrobiological Research
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Antibakteriālo līdzekļu patēriņš un tā izmaiņas Latvijas slimnīcās

2013

Elektroniskā versija nesatur pielikumus

SurveillancePrevalence studiesAntibakteriālo līdzekļu patēriņšMedicineAntibacterialsMedicīna un farmācijaAntimicrobial resistanceAntimikrobā rezistenceVeselības aprūpePrevalences pētījumsMedicīna
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Closing in on the toxic domain through analysis of a variant Clostridium difficile cytotoxin B

1995

Strain 1470 is the standard typing strain for serogroup F of Clostridium difficile containing both toxin genes, toxA-1470 and toxB-1470. A polymerase chain reaction (PCR)-based approach to the sequencing of the total toxB-1470 gene identified an open reading frame (ORF) of 7104 nucleotides. In comparison with the previously sequenced toxB of C. difficile VP10463, the toxB-1470 gene has 16 additional nucleotides, 13 within the 5'-untranslated region and three within the coding region. The M(r) of ToxB-1470 is 269,262, with an isoelectric point (IP) of 4.16. The equivalent values for ToxB are M(r) 269,709 and IP 4.13. In comparison with ToxB, ToxB-1470 differs primarily in the N-terminal regi…

SwineSequence analysisBacterial ToxinsMolecular Sequence DataRestriction MappingClostridium sordelliiMicrobiologyCell LineMicrobiologyOpen Reading FramesBacterial ProteinsAnimalsCoding regionAmino Acid SequenceCloning MolecularMolecular BiologyPeptide sequenceGeneClostridiumBase SequencebiologyClostridioides difficileCytotoxinsSequence Analysis DNAClostridium difficileClostridium novyibiology.organism_classificationActinsOpen reading frameGenes BacterialEndothelium VascularMolecular Microbiology
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Circadian and Infradian Activity Rhythms in the Mammalian Pineal Body

1982

The neuroendocrine nature of the pineal organ is well established. Linked to the optic system via postganglionic sympathetic fibres coming from the superior cervical ganglia, the parenchymal cells of the pineal synthesize serotonin from tryptophan and convert it to melatonin, the most widely studied pineal substance, and other indoleamines. Melatonin synthesis is stimulated by noradrenaline released from intrapineal sympathetic nerve fibres, involving β-adrenergic mechanisms and the adenyl cyclase-cAMP-system. The rate-limiting enzyme of melatonin formation is serotonin-N-acetyltransferase (NAT) that converts serotonin to N-acetylserotonin. Hydroxyindole-O-methyltransferase (HIOMT) catalyze…

Synaptic ribbonendocrine systemmedicine.medical_specialtyChemistryGerbilBacterial circadian rhythmsMelatoninPineal glandmedicine.anatomical_structureEndocrinologyInfradian rhythmInternal medicinemedicineSerotoninCircadian rhythmhormones hormone substitutes and hormone antagonistsmedicine.drug
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Cluster of Legionnaires’ Disease in an Italian Prison

2019

Background: Legionella pneumophila (Lp) is the most common etiologic agent causing Legionnaires&rsquo

SystemVeterinary medicine<i>Legionella pneumophila</i>Health Toxicology and Mutagenesismedia_common.quotation_subjectwaterlcsh:MedicinePrison030230 surgeryReference laboratoryDisease clusterLegionella pneumophilaArticleLegionella pneumophila03 medical and health sciences0302 clinical medicinePrevalencemedicineCluster AnalysisHumansTypingclusterGenotypingmedia_common0303 health sciencesbiology030306 microbiologylcsh:RPublic Health Environmental and Occupational HealthSequence typesbacterial infections and mycosesbiology.organism_classificationmedicine.diseaserespiratory tract diseasesItalyPrisonsbacteriasystemsLegionnaires' diseaseprisonLegionnaires' DiseaseWater MicrobiologyEnvironmental MonitoringInternational Journal of Environmental Research and Public Health
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One is not enough: On the effects of reference genome for the mapping and subsequent analyses of short-reads.

2020

Mapping of high-throughput sequencing (HTS) reads to a single arbitrary reference genome is a frequently used approach in microbial genomics. However, the choice of a reference may represent a source of errors that may affect subsequent analyses such as the detection of single nucleotide polymorphisms (SNPs) and phylogenetic inference. In this work, we evaluated the effect of reference choice on short-read sequence data from five clinically and epidemiologically relevant bacteria (Klebsiella pneumoniae, Legionella pneumophila, Neisseria gonorrhoeae, Pseudomonas aeruginosa and Serratia marcescens). Publicly available whole-genome assemblies encompassing the genomic diversity of these species…

Systematic errorSingle Nucleotide PolymorphismsPathology and Laboratory MedicineGenomeKlebsiella PneumoniaeDatabase and Informatics MethodsData sequencesKlebsiellaMedicine and Health SciencesBiology (General)CladePhylogenyData ManagementEcologyPhylogenetic treeBacterial GenomicsMicrobial GeneticsChromosome MappingHigh-Throughput Nucleotide SequencingPhylogenetic AnalysisGenomicsBacterial PathogensPhylogeneticsLegionella PneumophilaComputational Theory and MathematicsMedical MicrobiologyModeling and SimulationPathogensSequence AnalysisResearch ArticleComputer and Information SciencesBioinformaticsQH301-705.5LegionellaSequence alignmentSingle-nucleotide polymorphismGenomicsComputational biologyMicrobial GenomicsBiologyResearch and Analysis MethodsPolymorphism Single NucleotideMicrobiologyCellular and Molecular NeurosciencePhylogeneticsGeneticsSNPBacterial GeneticsEvolutionary SystematicsMolecular BiologyMicrobial PathogensEcology Evolution Behavior and SystematicsTaxonomyEvolutionary BiologyBacteriaOrganismsBiology and Life SciencesBacteriologySequence AlignmentGenome BacterialReference genomePLoS Computational Biology
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Modular organization in the reductive evolution of protein-protein interaction networks

2006

Analysis of the reduction in genome size of Buchnera aphidicola from its common ancestor E. coli shows that the organization of networks into modules is the property that seems to be directly related with the evolutionary process of genome reduction.

Systems biologyComplex systemComputational biologyBiologyGenomeProtein protein interaction networkProtein–protein interactionBuchneraInteraction networkProtein Interaction MappingEscherichia coliAnimalsHumansDatabases ProteinGeneticsbusiness.industrySystems BiologyResearchbiochemical phenomena metabolism and nutritionModular designbiology.organism_classificationBiological EvolutionProtein Structure TertiaryStructural Homology ProteinMultiprotein ComplexesBuchnerabusinessAlgorithmsGenome BacterialGenome Biology
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Definition of the HLA-A2 restricted peptides recognized by human CD8+ effector T cells by flow-assisted sorting of the CD8+ CD45RA+ CD28– T cell subp…

2003

SUMMARY In response to antigenic stimulation, naive MHC-class I restricted and antigen-specific CD8+ CD45RA+ CD28+ T cells undergo clonal expansion, differentiate into CD8+ CD45RO+ memory T cells and convert to CD8+ CD45RA+ CD28− T cells displaying potent immune effector functions upon re-encounter with the nominal antigen. We show that the effector CD8+ CD45RA+ CD28– T cell subset is expanded in peripheral blood lymphocytes (PBL) from patients with human papilloma virus (HPV)+ cervical lesions as well as in PBL from patients with pulmonary tuberculosis. Flow-cytometric cell sorted CD8+ CD45RA+ CD28– and CD8+ CD45RA+ CD28– T cells were tested for recognition of HLA-A2 restricted peptides de…

T cellImmunologyUterine Cervical Neoplasmschemical and pharmacologic phenomenaStreptamerBiologyT-Lymphocytes RegulatoryImmunophenotypingAntigen-Antibody ReactionsViral ProteinsInterleukin 21Bacterial ProteinsCD28 AntigensAntigenHLA-A2 AntigenmedicineHumansImmunology and AllergyCytotoxic T cellIL-2 receptorAntigen-presenting cellTuberculosis PulmonaryAntigens BacterialPapillomavirus InfectionsCD28Cell Differentiationhemic and immune systemsMycobacterium tuberculosisOriginal ArticlesFlow Cytometrymedicine.anatomical_structureImmunologyLeukocyte Common AntigensFemaleCell DivisionClinical and Experimental Immunology
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Unexpected Modulation of Recall B and T Cell Responses after Immunization with Rotavirus-like Particles in the Presence of LT-R192G

2010

LT-R192G, a mutant of the thermolabile enterotoxin of E. coli, is a potent adjuvant of immunization. Immune responses are generally analyzed at the end of protocols including at least 2 administrations, but rarely after a prime. To investigate this point, we compared B and T cell responses in mice after one and two intrarectal immunizations with 2/6 rotavirus-like particles (2/6-VLP) and LT-R192G. After a boost, we found, an unexpected lower B cell expansion measured by flow cytometry, despite a secondary antibody response. We then analyzed CD4(+)CD25(+)Foxp3(+) regulatory T cells (Tregs) and CD4(+)CD25(+)Foxp3(-) helper T cells after in vitro (re)stimulation of mesenteric lymph node cells …

T-LymphocytesHealth Toxicology and Mutagenesismedicine.medical_treatmentT cellBacterial ToxinsDose-Response Relationship Immunologiclcsh:Medicinechemical and pharmacologic phenomenaBiologyToxicologyArticleregulatory T cellsEnterotoxinsMiceInterleukin 21Immune systemB-1a lymphocyteAdjuvants ImmunologicAntigenmedicineAnimalsIL-2 receptorCD25B cellB-LymphocytesMice Inbred BALB CB lymphocytemucosal immunizationEscherichia coli Proteinslcsh:RRotavirus VaccinesVirionFOXP3LT-R192Ghemic and immune systemsrotavirusmedicine.anatomical_structureFoxp3ImmunologyFemaleImmunizationAdjuvantToxins
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In vitro T-cell immunogenicity of oligopeptides derived from the region 92-110 of the 16-kDa protein ofMycobacterium tuberculosis

2004

The 16-kDa protein of Mycobacterium tuberculosis provokes specific immune responses; it is thus a target for the development of peptide-based diagnostic reagents and subunit vaccines. Previous studies have demonstrated the presence of several regions containing murine and human T-cell epitopes. Within the 91–110 immunodominant domain, we found that peptides comprising the sequence of 91SEFAYGSFVRTVSL104 elicit specific T-cell responses in both human T-cell clones and human peripheral blood mononuclear cells (PBMC) from PPD+ (purified protein derivative) individuals. Elongation of this peptide towards the C-terminal end did not provide more effective peptides, but the removal of residue 91Se…

T-LymphocytesT cellMolecular Sequence DataBiophysicsPeptideIn Vitro TechniquesBiochemistryProtein Structure SecondaryEpitopeBiomaterialsMycobacterium tuberculosisEpitopesInterferon-gammaMiceBacterial ProteinsmedicineAnimalsHumansAmino Acid SequenceProtein secondary structurechemistry.chemical_classificationOligopeptidebiologyChemistryImmunogenicityOrganic ChemistryMycobacterium tuberculosisGeneral Medicinebiology.organism_classificationMolecular biologyIn vitroMolecular Weightmedicine.anatomical_structureOligopeptidesBiopolymers
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