Search results for "Bacterium"

showing 10 items of 595 documents

Low sensitivity of the MPT64 identification test to detect lineage 5 of the Mycobacterium tuberculosis complex

2018

Abstract: Purpose. Differentiation of the Mycobacterium tuberculosis complex (MTBc) from non-tuberculous mycobacteria (NTM) is important for tuberculosis diagnosis and is a prerequisite for reliable phenotypic drug-resistance testing. We evaluated the performance of the rapid MPT64 antigen identification test for the detection of Mycobacterium africanum lineage 5 (MAF L5). Methodology. Smear-positive tuberculosis patients' sputa were included prospectively. Culture was performed on Lowenstein-Jensen medium and, when positive, the MPT64 test and the classical para-nitro benzoic acid susceptibility and heat-labile catalase (PNB/catalase) identification tests were performed. The MPT64 test was…

0301 basic medicineMicrobiology (medical)TuberculosisRepeat testing030106 microbiologyPolymorphism Single NucleotideSensitivity and SpecificityMicrobiologyMicrobiology03 medical and health sciencesTuberculosis diagnosisAntigenmedicineHumansTuberculosisBiologyAntigens BacterialbiologyGene Expression Regulation BacterialMycobacterium tuberculosisGeneral Medicinebiology.organism_classificationmedicine.diseaseBacterial Typing Techniques3. Good healthMycobacterium tuberculosis complexNonsynonymous snpsMycobacterium africanumJournal of Medical Microbiology
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Large genomics datasets shed light on the evolution of the Mycobacterium tuberculosis complex

2019

Review: 5 páginas, 1 figura

0301 basic medicineMicrobiology (medical)TuberculosisVirulence FactorsEvolutionmedia_common.quotation_subject030106 microbiologyVirulenceGenomicsMicrobiologyPopulation genomicsEvolution Molecular03 medical and health sciencesGeneticsmedicineHumansTuberculosisEvolution Genomics Mycobacterium tuberculosis complex Positive selectionMolecular BiologyEcology Evolution Behavior and SystematicsPhylogenymedia_commonbiologyStrain (biology)Genetic VariationMycobacterium tuberculosisGenomicsGlobal diversitymedicine.diseasebiology.organism_classification3. Good healthPositive selection030104 developmental biologyInfectious DiseasesMycobacterium tuberculosis complexEvolutionary biologyHost-Pathogen InteractionsMycobacterium tuberculosis complexhuman activitiesGenome BacterialDiversity (politics)
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Are moxifloxacin and levofloxacin equally effective to treat XDR tuberculosis?

2017

International audience; Background: Moxifloxacin retains partial activity against some fluoroquinolone-resistant mutants of Mycobacterium tuberculosis. Levofloxacin is presumed to be as active as moxifloxacin against drug-susceptible tuberculosis and to have a better safety profile.Objectives: To compare the in vivo activity of levofloxacin and moxifloxacin against M. tuberculosis strains with various levels of fluoroquinolone resistance.Methods: BALB/c mice were intravenously infected with 106M. tuberculosis H37Rv and three isogenic mutants: GyrA A90V, GyrB E540A and GyrB A543V. Treatment with 50 or 100 mg/kg levofloxacin and 60 or 66 mg/kg moxifloxacin was given orally every 6 h, for 4 we…

0301 basic medicineMicrobiology (medical)Tuberculosis[SDV.SP.MED] Life Sciences [q-bio]/Pharmaceutical sciences/MedicationmiceExtensively Drug-Resistant Tuberculosis030106 microbiologyMicrobial Sensitivity TestsMicrobiologyMycobacterium tuberculosis03 medical and health sciences0302 clinical medicine[SDV.SP.MED]Life Sciences [q-bio]/Pharmaceutical sciences/MedicationLevofloxacinMoxifloxacinIn vivo[SDV.MHEP.MI]Life Sciences [q-bio]/Human health and pathology/Infectious diseasesmedicineAnimalsPharmacology (medical)heterocyclic compounds030212 general & internal medicinePharmacologyMice Inbred BALB ClevofloxacinbiologyChemistry[ SDV.SP.MED ] Life Sciences [q-bio]/Pharmaceutical sciences/MedicationExtensively drug-resistant tuberculosisMycobacterium tuberculosisbiochemical phenomena metabolism and nutritionmedicine.diseasebiology.organism_classificationbacterial infections and mycosesFluoroquinolone resistanceAnti-Bacterial Agents3. Good health[ SDV.MHEP.MI ] Life Sciences [q-bio]/Human health and pathology/Infectious diseasesDisease Models AnimalSafety profileTreatment OutcomeInfectious Diseasestuberculosis[SDV.MHEP.MI] Life Sciences [q-bio]/Human health and pathology/Infectious diseasesbacteriamoxifloxacinFluoroquinolonesmedicine.drug
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Interactions between Rainbow Trout Eyed Eggs and Flavobacterium spp. Using a Bath Challenge Model:Preliminary Evaluation of Bacteriophages as Pathoge…

2021

The microbial community surrounding fish eyed eggs can harbor pathogenic bacteria. In this study we focused on rainbow trout (Oncorhynchus mykiss) eyed eggs and the potential of bacteriophages against the pathogenic bacteria Flavobacterium psychrophilum and F. columnare. An infection bath method was first established, and the effects of singular phages on fish eggs was assessed (survival of eyed eggs, interaction of phages with eyed eggs). Subsequently, bacteria-challenged eyed eggs were exposed to phages to evaluate their effects in controlling the bacterial population. Culture-based methods were used to enumerate the number of bacteria and/or phages associated with eyed eggs and in the su…

0301 basic medicineMicrobiology (medical)bacteriophagesgenetic structuresCYTOPHAGA-PSYCHROPHILAQH301-705.5030106 microbiologyZoologyFlavobacterium psychrophilummedicine.disease_causeinfektiotMicrobiologybakteriofagitbakteeritCOLD-WATER DISEASE03 medical and health sciencesFlavobacterium columnaremätiFISHkirjolohiVirologyONCORHYNCHUS-MYKISS WALBAUMATLANTIC SALMONFlavobacterium psychrophilummedicineCOLUMNARE INFECTIONBiology (General)PathogenIncubationIN-VIVOeyed eggsbiologyPathogenic bacteria<i>Flavobacterium columnare</i>kalatauditbiology.organism_classificationrainbow troutphage-mediated control030104 developmental biologyFlavobacterium columnareembryonic structuresSURVIVALGENETIC DIVERSITYVIRULENCERainbow trout<i>Flavobacterium psychrophilum</i>FlavobacteriumBacteria
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In-Depth Characterization and Functional Analysis of Clonal Variants in a Mycobacterium tuberculosis Strain Prone to Microevolution

2017

The role of clonal complexity has gradually been accepted in infection by Mycobacterium tuberculosis (MTB), although analyses of this issue are limited. We performed an in-depth study of a case of recurrent MTB infection by integrating genotyping, whole genome sequencing, analysis of gene expression and infectivity in in vitro and in vivo models. Four different clonal variants were identified from independent intrapatient evolutionary branches. One of the single-nucleotide polymorphisms in the variants mapped in mce3R, which encodes a repressor of an operon involved in virulence, and affected expression of the operon. Competitive in vivo and in vitro co-infection assays revealed higher infe…

0301 basic medicineMicrobiology (medical)in vitro infectionsOperon030106 microbiologylcsh:QR1-502VirulenceBiologyMicrobiologylcsh:Microbiologyfunctional analysisMycobacterium tuberculosis03 medical and health sciencesmedicineMicroevolutionGenotypingIn vivo infectionsWhole genome sequencingGeneticsInfectivitywhole genome sequencingFunctional analysisMicroevolutionMycobacterium tuberculosisbiology.organism_classificationmedicine.disease3. Good healthmicroevolutionWhole genome sequencingCoinfectionIn vitro infectionsin vivo infectionsFrontiers in Microbiology
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Mycobacterium tuberculosis Acquires Limited Genetic Diversity in Prolonged Infections, Reactivations and Transmissions Involving Multiple Hosts

2018

9 páginas, 5 figuras y material suplementario en: https://www.frontiersin.org/articles/10.3389/fmicb.2017.02661/full#supplementary-material

0301 basic medicineMicrobiology (medical)lcsh:QR1-502Microbiologylcsh:Microbiologylaw.inventionStrainMycobacterium tuberculosis03 medical and health scienceslawMicroevolutionTuberculosisLatency (engineering)Clonal variantsVariabilityOriginal ResearchGeneticsGenetic diversitybiologyOutbreaksMicroevolutionbiology.organism_classification3. Good health030104 developmental biologyTransmission (mechanics)Whole genome sequencingAfricaSNPs
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Field performance of the Abbott RealTime MTB assay for the diagnosis of extrapulmonary tuberculosis in a low-prevalence setting

2020

Introduction: The sensitivities of conventional mycobacterial culture in solid or liquid media and acid-fast bacilli (AFB) smear microscopy for Mycobacterium tuberculosis complex (MTBC) detection in extrapulmonary specimens are suboptimal. We evaluated the field performance of the Abbott RealTime MTB assay for the diagnosis of extrapulmonary tuberculosis in a low-prevalence setting. Methods: The total number of extrapulmonary specimens with mycobacterial culture and PCR results was 566: sterile fluids (n = 278), non-sterile fluids (n = 147), lymph node material (n = 69) tissue biopsies (n = 63), and abscess aspirates (n = 9). A composite standard consisting of mycobacterial culture results,…

0301 basic medicineMicrobiology (medical)medicine.medical_specialty030106 microbiologyPcr assayReal-Time Polymerase Chain ReactionSensitivity and SpecificityGastroenterologyReal-time polymerase chain reactionSmear microscopy03 medical and health sciences0302 clinical medicineInternal medicinePrevalencemedicineHumansTuberculosis030212 general & internal medicineAbscessLymph nodeExtrapulmonary tuberculosisBacteriological Techniquesbiologybusiness.industryExtrapulmonary tuberculosisMycobacterial cultureField studyMycobacterium tuberculosisbiology.organism_classificationmedicine.diseasemedicine.anatomical_structureMycobacterium tuberculosis complexMycobacterium tuberculosis complexHistopathologybusinessEnfermedades infecciosas y microbiologia clinica (English ed.)
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Selection of New Probiotics for Endometrial Health

2019

Microbiota is a crucial player in gynecologic health, in which bacteria can shift to a dysbiotic state triggering a pathogenic process. Based on an ecological understanding of the problem, the aim of this study is to select a potential probiotic strain to improve female reproductive tract based on its capacity to initially lower pH and to promote the reduction of pathogenic bacteria. Based on this rationale, strain Lactobacillus rhamnosus BPL005 was initially selected for its capacity to reduce in vitro pH levels and produce organic acids. Subsequently, strain L. rhamnosus BPL005 (CECT 8800) was demonstrated to have a protective role on endometrial infections in an in vitro model of bacteri…

0301 basic medicineMicrobiology (medical)pathogen inhibition030106 microbiologyImmunologyCarboxylic Acidslcsh:QR1-502Atopobium vaginaemedicine.disease_causeReproductive Tract InfectionsMicrobiologylcsh:MicrobiologyStreptococcus agalactiaeMicrobiologylaw.invention03 medical and health sciencesPropionibacterium acnesProbioticLactobacillus rhamnosuslawAntibiosismedicineHumansGardnerella vaginalisendometrial healthPropionibacterium acnesL. rhamnosus BPL005 (CECT 8800)Cells CulturedbiologyLacticaseibacillus rhamnosusMicrobiotaProbioticsfood and beveragesEpithelial CellsPathogenic bacteriaGenitalia FemaleHydrogen-Ion Concentrationbiology.organism_classificationGardnerella vaginalisActinobacteria030104 developmental biologyInfectious DiseasesStreptococcus agalactiaegynecological pathogensFemaleBacteriaprobioticFrontiers in Cellular and Infection Microbiology
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Directed evolution of a Mycobacteriophage

2019

This article belongs to the Special Issue Bacteriophages: Alternatives to Antibiotics and Beyond.

0301 basic medicineMicrobiology (medical)phage therapyPhage therapyPhage therapyMycobacteriophagemedicine.medical_treatment030106 microbiologymycobacteriophagesMycobacterium smegmatismedicine.disease_causeBiochemistryMicrobiologyArticle03 medical and health sciencesAntibiotic resistancemedicinePharmacology (medical)General Pharmacology Toxicology and Pharmaceuticsdirected evolutionGeneticsMycobacteriophagesbiologyMycobacterium smegmatislcsh:RM1-950Pathogenic bacteriaMycobacteriophagesbiology.organism_classificationDirected evolution3. Good health030104 developmental biologyInfectious Diseaseslcsh:Therapeutics. PharmacologyLytic cycle<i>Mycobacterium smegmatis</i>Directed evolution
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Local adaptation in populations of Mycobacterium tuberculosis endemic to the Indian Ocean Rim

2021

24 páginas, 3 figuras, 1 tabla. The sequence data generated by this study has been deposited on SRA (https://www.ncbi.nlm.nih.gov/sra) under the accession number PRJNA670836. Extended data is available here: https://github.com/fmenardo/MTBC_L1_L3. DOI: https://doi.org/10.5281/zenodo.4609804 (Menardo, 2021).

0301 basic medicineMycobacterium tuberculosis / patogenicidadeTuberculosisGenotypevirusesLineage (evolution)030106 microbiologyLocus (genetics)adaptationBiologyGenomeGeneral Biochemistry Genetics and Molecular BiologyMycobacterium tuberculosis03 medical and health sciencesAdapta??oGenoma BacterianomedicineHumansOceano ?ndico / epidemiologiaGeneral Pharmacology Toxicology and PharmaceuticsAdaptationIndian OceanLocal adaptationGenetic diversityGeneral Immunology and Microbiologyvirus diseasesTuberculose / patologiaGeneral MedicineArticlesMycobacterium tuberculosisbiochemical phenomena metabolism and nutritionbiology.organism_classificationmedicine.diseasedigestive system diseases3. Good health030104 developmental biologyMycobacterium tuberculosis complexEvolutionary biologycoevolutionLinhagemCoevolutionResearch ArticleF1000Research
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