Search results for "Base Sequence"

showing 10 items of 1146 documents

Genetic basis of human complement C4A deficiency. Detection of a point mutation leading to nonexpression.

1993

Abstract The fourth component of the human complement system (C4) is coded for by two genes, C4A and C4B, located within the MHC. Null alleles of C4 (C4Q0) are defined by the absence of C4 protein in plasma. These null alleles are due either to large gene deletions or to nonexpression of the respective genes. In a previous study, evidence was obtained for nonexpressed defective genes at the C4A locus, and for gene conversion at the C4B locus. To further characterize the molecular basis of these non-expressed C4A genes, we selected nine pairs of PCR primers from flanking genomic intron sequences to amplify all 41 exons from individuals with a defective C4A gene. The amplified products were s…

ElectrophoresisMolecular Sequence DataLocus (genetics)BiologyPolymerase Chain ReactionAutoimmune DiseasesHumansPoint MutationGene conversionAmino Acid SequenceGeneGeneticsPolymorphism GeneticBase SequenceHaplotypeC4AGene AmplificationImmunologic Deficiency SyndromesComplement C4aSingle-strand conformation polymorphismGeneral MedicineExonsSequence Analysis DNAMolecular biologyNull alleleStop codonHaplotypesResearch Article
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cDNA cloning and deduced amino acid sequence of a major, glycine-rich cuticular protein from the coleopteran Tenebrio molitor. Temporal and spatial d…

1992

0014-2956 (Print) Journal Article Research Support, Non-U.S. Gov't; In Coleoptera, the elytra (forewings), with a very hard and thick cuticle, protect the membranous and delicate hindwings against mechanical stress. We have isolated and characterized a cDNA encoding a major cuticle protein in Tenebrio molitor, named ACP-20. The deduced amino acid sequence is roughly tripartite, with two terminal glycine-rich domains and a central region showing pronounced similarities with some other hard cuticle proteins. Northern blot and in situ hybridization analyses reveal that ACP-20 gene expression is developmentally regulated since transcript accumulation occurs only in epidermal regions synthesizin…

Electrophoresismedia_common.quotation_subjectCuticleMolecular Sequence DataGlycineProteins/chemistry/*geneticsBiologyBiochemistryDNA/chemistry/*geneticsComplementary DNAGene expressionBiological/genetics/physiologyAnimalsElectrophoresis Gel Two-DimensionalNorthernNorthern blotAmino Acid SequenceCloning MolecularMetamorphosisTenebrioPeptide sequencemedia_commonGelBase SequenceMetamorphosisBlottingMetamorphosis BiologicalNucleic acid sequenceProteinsMolecularNucleic Acid HybridizationDNABlotting NorthernMolecular biologyTenebrio/chemistry/*geneticsCell biologyGene Expression RegulationGlycine/analysisJuvenile hormoneTwo-DimensionalInsect ProteinsCloning
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Sea urchin HSF activity in vitro and in transgenic embryos.

1997

Evidence is provided for the presence at the physiological temperature of 20 degrees C of a heat shock transcriptor factor, HSF, in the nuclei of P.lividus embryos. This HSF is able to specifically bind in vitro the heat shock element, HSE, of the promoter of the hsp70 gene i.v., as suggested by DNA-protein binding reactions and DNAse I protection assays. Upon heat-shock, at the temperature of 31 degrees C, its ability to bind the HSE units becomes much higher. The HSF activated by heat-shock drives in vivo the transcription of the beta-galactosidase reporter gene in transgenic sea urchin gastrulae. An ATF-like transcription factor, widely described in other organisms but not at all in sea …

Embryo NonmammalianHot TemperatureSea UrchinTranscription FactorTransgeneRecombinant Fusion ProteinsMolecular Sequence DataBiophysicsTransfectionBiochemistryAnimals Genetically ModifiedTranscription (biology)Genes Reporterbiology.animalHeat shock proteinAnimalsHSP70 Heat-Shock ProteinsCell NucleuPromoter Regions GeneticMolecular BiologySea urchinTranscription factorHeat-Shock ProteinsCell NucleusHSP70 Heat-Shock ProteinReporter genebiologyBase SequenceAnimalTemperatureHeat-Shock ProteinPromoterCell BiologyGastrulabeta-GalactosidaseMolecular biologyCell biologyHsp70BiophysicSea UrchinsRecombinant Fusion ProteinTranscription FactorsBiochemical and biophysical research communications
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Gene within gene configuration and expression of the Drosophila melanogaster genes lethal(2) neighbour of tid [l(2)not] and lethal(2) relative of tid…

1997

In this paper, we describe the structure and temporal expression pattern of the Drosophila melanogaster genes l(2)not and l(2)rot located at locus 59F5 vis a vis the tumor suppressor gene l(2)tid described previously and exhibiting a gene within gene configuration. The l(2)not protein coding region, 1530 nt, is divided into two exons by an intron, 2645 nt, harboring the genes l(2)rot, co-transcribed from the same DNA strand, and l(2)tid, co-transcribed from the opposite DNA strand, located vis a vis. To determine proteins encoded by the genes described in this study polyclonal rabbit antibodies (Ab), anti-Not and anti-Rot, were generated. Immunostaining of developmental Western blots with t…

Embryo NonmammalianTranscription GeneticMolecular Sequence DataRestriction MappingGenes Insectmacromolecular substancesBiologyMannosyltransferasesAntibodiesExonTranscription (biology)GeneticsAnimalsDrosophila ProteinsNorthern blotAmino Acid SequenceMicroscopy ImmunoelectronGeneBody PatterningRegulation of gene expressionBase SequenceSequence Homology Amino Acidtechnology industry and agricultureIntronRNAGene Expression Regulation DevelopmentalMembrane ProteinsGeneral MedicineExonsMolecular biologyIntronsPeptide FragmentsAntisense RNADrosophila melanogasterGene Expression RegulationInsect ProteinsRabbitsSequence AlignmentGene
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The RNA-binding protein ELAV regulates Hox RNA processing, expression and function within the Drosophila nervous system

2014

The regulated head-to-tail expression of Hox genes provides a coordinate system for the activation of specific programmes of cell differentiation according to axial level. Recent work indicates that Hox expression can be regulated via RNA processing but the underlying mechanisms and biological significance of this form of regulation remain poorly understood. Here we explore these issues within the developing Drosophila central nervous system (CNS). We show that the pan-neural RNA-binding protein (RBP) ELAV (Hu antigen) regulates the RNA processing patterns of the Hox gene Ultrabithorax (Ubx) within the embryonic CNS. Using a combination of biochemical, genetic and imaging approaches we demo…

Embryo Nonmammaliananimal structuresNeurogenesisRNA-binding proteinCellular differentiationMolecular Sequence DataRNA-binding proteinBiologyAntennapediaNervous SystemMorphogenesisAnimalsDrosophila ProteinsRNA Processing Post-TranscriptionalELAV/HuHox geneMolecular BiologyTranscription factorPhylogenyResearch ArticlesUltrabithoraxHomeodomain ProteinsAlternative polyadenylation (APA)GeneticsBase SequenceAlternative splicingGenes HomeoboxGene Expression Regulation DevelopmentalSegment-specific apoptosisHoxCell biologyDrosophila melanogasterELAV ProteinsRNA processingCentral nervous systemembryonic structuresDrosophilaDrosophila ProteinTranscription FactorsAlternative splicingDevelopmental BiologyDevelopment
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Isolated bladder exstrophy associated with a de novo 0.9 Mb microduplication on chromosome 19p13.12

2012

BACKGROUND: The exstrophy-epispadias complex (BEEC) is a urogenital birth defect of varying severity. The causes of the BEEC are likely to be heterogeneous, with individual environmental or genetic risk factors still being largely unknown. In this study, we aimed to identify de novo causative copy number variations (CNVs) that contribute to the BEEC. METHODS: Array-based molecular karyotyping was performed to screen 110 individuals with BEEC. Promising CNVs were tested for de novo occurrence by investigating parental DNAs. Genes located in regions of rearrangements were prioritized through expression analysis in mice to be sequenced in the complete cohort, to identify high-penetrance mutati…

EmbryologyDNA Copy Number VariationsSequence analysisKaryotypeUrinary BladderGene DosageMedizinBiologyGene dosageMicesymbols.namesakeGene DuplicationChromosome DuplicationGene duplicationAnimalsHumansCoding regionCopy-number variationGeneSanger sequencingGeneticsBase SequenceBladder ExstrophySequence Analysis DNAGeneral MedicinePediatrics Perinatology and Child HealthChromosomal regionsymbolsChromosomes Human Pair 19Developmental Biology
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Cloning of Several Genes Coding for Retinoic Acid Nuclear Receptors in the Mouse Embryonal Carcinoma Cell Line PCC7–MZ1

1993

Mouse embryonal carcinoma cell line PCC7-Mz1 can be induced by retinoic acid (RA) to differentiate into several well defined phenotypes of neuroectodermal origin (Lang, E. et al. (1989) J. Cell. Biol. 109, 2481-2493). Several subclones of the cell line (clonal variants) differ from each other in their developmental potential. To test whether these differences in cellular fate are due to somatic mutations in specific genes of these cells, we have cloned full length cDNAs coding for the alpha 1 and beta 2 isoforms, and partial length cDNAs coding for the alpha 2, beta 1 and beta 3 isoforms of the retinoic acid nuclear receptor (RAR). The cloned cDNAs did not differ in sequence from those of n…

Embryonal Carcinoma Stem CellsReceptors Retinoic AcidSomatic cellCellular differentiationMolecular Sequence DataRetinoic acidTretinoinBiologyEmbryonal carcinomaMicechemistry.chemical_compoundTumor Cells CulturedmedicineAnimalsHumansAmino Acid SequenceCloning MolecularPromoter Regions GeneticGenePharmacologyCloningBase SequenceNuclear ProteinsEmbryonal Carcinoma Stem CellsCell DifferentiationDNAmedicine.diseaseMolecular biologyRecombinant ProteinsRetinoic acid receptorchemistryNeoplastic Stem CellsCarrier ProteinsJournal of Receptor Research
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Avidin Is a Promising Tag for Fusion Proteins Produced in Baculovirus-Infected Insect Cells

1999

The baculovirus expression vector system (BEVS) has become one of the most versatile and powerful eukaryotic systems for recombinant protein expression. We have constructed a novel baculovirus transfer vector (pbacAVs+C) which allows for the efficient production, detection, and single-step purification of the desired molecule as a secretion-compatible avidin fusion protein in insect cells. It also enables fast construction of the baculoviruses by site-specific transposition in Escherichia coli. To demonstrate the power of this vector, we report here on the production of immunologically intact hevein, a major cysteine-rich latex allergen, as avidin fusion protein. Our results indicate that a…

EnteropeptidaseStreptavidinRecombinant Fusion ProteinsGenetic VectorsMolecular Sequence DataGene ExpressionSpodopteramedicine.disease_causeCell Linelaw.invention03 medical and health scienceschemistry.chemical_compoundlawLectinsmedicineAnimalsAmino Acid SequenceEscherichia coliPeptide sequenceDNA PrimersPlant Proteins030304 developmental biology0303 health sciencesBinding SitesBase Sequencebiology030302 biochemistry & molecular biologyAvidinFusion proteinMolecular biologyEnteropeptidasechemistryBiochemistryCell culturebiology.proteinRecombinant DNAPlant LectinsBaculoviridaeAntimicrobial Cationic PeptidesPlasmidsBiotechnologyAvidinProtein Expression and Purification
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Molecular characterisation of Galba truncatula, Lymnaea neotropica and L. schirazensis from Cajamarca, Peru and their potential role in transmission …

2012

Abstract Background Human and animal fascioliasis is emerging in many world regions, among which Andean countries constitute the largest regional hot spot and Peru the country presenting more human endemic areas. A survey was undertaken on the lymnaeid snails inhabiting the hyperendemic area of Cajamarca, where human prevalences are the highest known among the areas presenting a "valley transmission pattern", to establish which species are present, genetically characterise their populations by comparison with other human endemic areas, and discuss which ones have transmission capacity and their potential implications with human and animal infection. Methods Therefore, ribosomal DNA ITS-2 an…

EntomologyDisease reservoirMitochondrial DNAFascioliasisSnailsZoologyDNA MitochondrialPolymerase Chain ReactionHost-Parasite Interactionslcsh:Infectious and parasitic diseasesRNA Ribosomal 16SPeruFasciola hepaticaAnimalsHumanslcsh:RC109-216Galba truncatulaDisease ReservoirsPopulation DensityFasciolabiologyBase SequenceEcologyResearchbiology.organism_classificationFasciolaInfectious DiseasesGalbaParasitologyLarvaCyclooxygenase 1ParasitologyParasites & Vectors
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A new baseline for fascioliasis in Venezuela: lymnaeid vectors ascertained by DNA sequencing and analysis of their relationships with human and anima…

2011

Abstract Background Human and animal fascioliasis poses serious public health problems in South America. In Venezuela, livestock infection represents an important veterinary problem whereas there appear to be few human cases reported, most of which are passively detected in health centres. However, results of recent surveys suggest that the situation may be underestimated in particular areas. To obtain a baseline for future fascioliasis assessment, studies were undertaken by means of rDNA ITS-2 and ITS-1 and mtDNA cox 1 sequencing to clarify the specific status of Venezuelan lymnaeids, their geographical distribution and fascioliasis transmission capacity, by comparison with other American …

EntomologyFascioliasisOld WorldLivestockPseudosuccinea columellaFaunaMolecular Sequence DataSnailsZoologyDisease Vectorslcsh:Infectious and parasitic diseasesAnimalsHumanslcsh:RC109-216Amino Acid SequencePhylogenyGalba truncatulabiologyBase Sequencebusiness.industryEcologyResearchSequence Analysis DNAFasciola hepaticabiology.organism_classificationVenezuelaInfectious DiseasesParasitologyVector (epidemiology)ParasitologyLivestockbusinessParasites & Vectors
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