Search results for "Bayesian computation"
showing 2 items of 12 documents
Data from: Extinction and recolonization of maritime Antarctica in the limpet Nacella concinna (Strebel, 1908) during the last glacial cycle: toward …
2013
Quaternary glaciations in Antarctica drastically modified geographical ranges and population sizes of marine benthic invertebrates and thus affected the amount and distribution of intraspecific genetic variation. Here, we present new genetic information in the Antarctic limpet Nacella concinna, a dominant Antarctic benthic species along shallow ice-free rocky ecosystems. We examined the patterns of genetic diversity and structure in this broadcast spawner along maritime Antarctica and from the peri-Antarctic island of South Georgia. Genetic analyses showed that N. concinna represents a single panmictic unit in maritime Antarctic. Low levels of genetic diversity characterized this population…
Theoretical and methodological aspects of MCMC computations with noisy likelihoods
2018
Approximate Bayesian computation (ABC) [11, 42] is a popular method for Bayesian inference involving an intractable, or expensive to evaluate, likelihood function but where simulation from the model is easy. The method consists of defining an alternative likelihood function which is also in general intractable but naturally lends itself to pseudo-marginal computations [5], hence making the approach of practical interest. The aim of this chapter is to show the connections of ABC Markov chain Monte Carlo with pseudo-marginal algorithms, review their existing theoretical results, and discuss how these can inform practice and hopefully lead to fruitful methodological developments. peerReviewed