Search results for "Biochemistry"

showing 10 items of 20172 documents

Molecular determinants of the Arabidopsis AKT1 K+ channel ionic selectivity investigated by expression in yeast of randomly mutated channels

1999

International audience; The Avabidopsis thaliana K+ channel AKT1 was expressed in a yeast strain defective for K+ uptake at low K+ concentrations (<3 mM). Besides restoring K+ transport in this strain, AKT1 expression increased its tolerance to salt (NaCl or LiCl), whatever the external K+ concentration used (50 mu M, 5 mM, or 50 mM), We took advantage of the latter phenomenon for screening a library of channels randomly mutated in the region that shares homologies with the pore forming domain (the so-called P domain) of animal K+ channels (Shaker family). Cassette mutagenesis was performed using a degenerate oligonucleotide that was designed to ensure, theoretically, a single mutation per …

0106 biological sciencesPhysiology[SDV]Life Sciences [q-bio]Saccharomyces cerevisiaeMutantPlant Science01 natural sciencesCell membrane03 medical and health sciencesComplementary DNAGeneticsmedicine[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyIon transporterComputingMilieux_MISCELLANEOUS030304 developmental biologychemistry.chemical_classification0303 health sciencesbiologyCell BiologyGeneral Medicinebiology.organism_classificationCassette mutagenesisAmino acidmedicine.anatomical_structureBiochemistrychemistryBiophysicsMembrane channel010606 plant biology & botany
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Symbiosis-related plant genes modulate molecular responses in an arbuscular mycorrhizal fungus during early root interactions.

2009

To gain further insight into the role of the plant genome in arbuscular mycorrhiza (AM) establishment, we investigated whether symbiosis-related plant genes affect fungal gene expression in germinating spores and at the appressoria stage of root interactions. Glomus intraradices genes were identified in expressed sequence tag libraries of mycorrhizal Medicago truncatula roots by in silico expression analyses. Transcripts of a subset of genes, with predicted functions in transcription, protein synthesis, primary or secondary metabolism, or of unknown function, were monitored in spores and germinating spores and during interactions with roots of wild-type or mycorrhiza-defective (Myc–) mutan…

0106 biological sciencesPhysiologychampignon phytopathogèneBiologyGenes Plant01 natural sciencesPlant Root NodulationPlant RootsMicrobiology03 medical and health sciencesGene Expression Regulation PlantARBUSCULAR MYCORRHIZAL FUNGUSMycorrhizaeGene expressionMedicago truncatulaSpore germination[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyMycorrhizaSymbiosisGene030304 developmental biologyPlant Proteins0303 health sciencesAppressoriumExpressed sequence taggénomegènefungifood and beveragesGeneral Medicine15. Life on landbiology.organism_classificationMedicago truncatulaArbuscular mycorrhizaracinesymbioseAgronomy and Crop Science010606 plant biology & botanyMolecular plant-microbe interactions : MPMI
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Protein phosphorylation is induced in tobacco cells by the elicitor cryptogein

1994

Changes in plasmalemma ion fluxes were observed when tobacco (Nicotiana tabacum) cells were treated with cryptogein, a proteinaceous elicitor from Phytophthora cryptogea. A strong alkalization of the culture medium, accompanied by a leakage of potassium, was induced within a few minutes of treatment. These effects reached a maximum after 30 to 40 min and lasted for several hours. This treatment also resulted in a rapid, but transient, production of activated oxygen species. All these physiological responses were fully sensitive to staurosporine, a known protein kinase inhibitor. Furthermore, a study of protein phosphorylation showed that cryptogein induced a staurosporine-sensitive phosphor…

0106 biological sciencesPhysiologymedicine.drug_classNicotiana tabacumPlant Sciencemacromolecular substances01 natural sciences[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics03 medical and health sciences[SDV.GEN.GPL] Life Sciences [q-bio]/Genetics/Plants geneticsGeneticsmedicineStaurosporineProtein phosphorylationComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencesbiologyPhytophthora cryptogeafood and beveragesCULTURE DE TISSUSProtein kinase inhibitorbiology.organism_classificationElicitorBiochemistryCell culturePhosphorylation010606 plant biology & botanymedicine.drugResearch Article
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Nuclear protein kinases: still enigmatic components in plant cell signalling

2010

International audience; Plants constantly face changing conditions in their environment. Unravelling the transduction mechanisms from signal perception at the plasma membrane level down to gene expression in the nucleus is a fascinating challenge. Protein phosphorylation, catalysed by protein kinases, is one of the major posttranslational modifications involved in the specificity, kinetic(s) and intensity of a signal transduction pathway. Although commonly assumed, the involvement of nuclear protein kinases in signal transduction is often poorly characterized. In particular, both their regulation and mode of action remain to be elucidated and may lead to the unveiling of new original mechan…

0106 biological sciencesPhysiologyp38 mitogen-activated protein kinasesPROTEIN KINASENUCLEAR TRANSLOCATIONPlant ScienceBiology01 natural sciencesSecond Messenger Systems03 medical and health sciencesNCK1Protein phosphorylationNuclear proteinNUCLEUS030304 developmental biologyPROTEIN (DE)PHOSPHORYLATION0303 health sciencesGRB10SIGNAL TRANSDUCTIONNuclear ProteinsAutophagy-related protein 13PlantsCell biology[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyBiochemistryCDC37Mitogen-activated protein kinasebiology.proteinProtein Kinases010606 plant biology & botany
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Elicitins trap and transfer sterols from micelles, liposomes and plant plasma membranes

1999

Using elicitins, proteins secreted by some phytopathogenic Oomycetes (Phytophthora) known to be able to transfer sterols between phospholipid vesicles, the transfer of sterols between micelles, liposomes and biological membranes was studied. Firstly, a simple fluorometric method to screen the sterol-carrier capacity of proteins, avoiding the preparation of sterolcontaining phospholipidic vesicles, is proposed. The transfer of sterols between DHE micelles (donor) and stigmasterol or cholesterol micelles (acceptor) was directly measured, as the increase in DHE fluorescence signal. The results obtained with this rapid and easy method lead to the same conclusions as those previously reported, u…

0106 biological sciencesPhytophthoraTime FactorsStigmasterolBiophysics01 natural sciencesMicelleBiochemistryFluorescenceFungal Proteins03 medical and health scienceschemistry.chemical_compoundErgosterolpolycyclic compoundsMicellesPlant Proteins030304 developmental biology0303 health sciencesLiposomeStigmasterolChemistryVesicleAlgal ProteinsCell MembraneProteinsElicitinBiological membraneLipid–protein interactionCell BiologyPlantsElicitinSterolsCholesterolMembraneBiochemistryDehydroergosterolLiposomeslipids (amino acids peptides and proteins)CryptogeinCarrier ProteinsFluorescence anisotropy010606 plant biology & botanyBiochimica et Biophysica Acta (BBA) - Biomembranes
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Elicitins, proteinaceous elicitors of plant defense, are a new class of sterol carrier proteins

1998

Some phytopathogenic fungi within Phytophthora species are unable to synthesize sterols and therefore must pick them up from the membranes of their host-plant, using an unknown mechanism. These pseudo-fungi secrete elicitins which are small hydrophilic cystein-rich proteins. The results show that elicitins studied interact with dehydroergosterol in the same way, but with some time-dependent differences. Elicitins have one binding site with a similar strong affinity for dehydroergosterol. Using a non-steroid hydrophobic fluorescent probe, we showed that phytosterols are able to similarly bind to elicitins. Moreover, elicitins catalyze sterol transfer between phospholipidic artificial membran…

0106 biological sciencesPhytophthora[SDV]Life Sciences [q-bio]Biophysics01 natural sciencesBiochemistryFungal Proteins03 medical and health sciencesNaphthalenesulfonatesErgosterolPlant defense against herbivoryExtracellularSecretionBinding sitePERSPECTIVEMolecular BiologyPhospholipidsComputingMilieux_MISCELLANEOUS030304 developmental biologyFluorescent Dyes0303 health sciencesBinding SitesbiologyfungiAlgal ProteinsPhytosterolsElicitinBiological TransportCell BiologyPlantsbiology.organism_classificationSterolCell biology[SDV] Life Sciences [q-bio]KineticsMembraneSpectrometry FluorescenceBiochemistryPhytophthoraCarrier Proteins010606 plant biology & botanyProtein Binding
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Universal primers for PCR-sequencing of grass chloroplastic acetyl-CoA carboxylase domains involved in resistance to herbicides

2005

Summary Primers were designed to amplify two regions involved in sensitivity to herbicides inhibiting the plastidic acetyl-CoA carboxylase (ACCase) from grasses (Poaceae). The first primer pair amplified a 551-bp amplicon containing a variable Ile/Leu codon at position 1781 in Alopecurus myosuroides sequence. The second primer pair amplified a 406-bp amplicon containing four variable codons (Trp/Cys, Ile/Asn, Asp/Gly, Gly/Ala) at positions 2027, 2041, 2078 and 2096, respectively, in A. myosuroides sequence. Both primer pairs amplified the targeted fragments from genes encoding plastidic ACCases, but not from the very similar genes encoding cytosolic ACCases. Clear DNA sequences were obtaine…

0106 biological sciencesPlant Science01 natural sciencesDNA sequencinglaw.inventionlaw[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyPoa annua[SDV.BV] Life Sciences [q-bio]/Vegetal BiologyACETYL COENZYME-A CARBOXYLASEGeneEcology Evolution Behavior and SystematicsPolymerase chain reactionComputingMilieux_MISCELLANEOUSGeneticsbiologyAlopecurus myosuroidesAcetyl-CoA carboxylasefood and beverages04 agricultural and veterinary sciencesAmpliconbiology.organism_classificationBiochemistry040103 agronomy & agriculture0401 agriculture forestry and fisheriesPrimer (molecular biology)Agronomy and Crop Science010606 plant biology & botany
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S-nitrosylation: An emerging post-translational protein modification in plants

2011

International audience; Increasing evidences support the assumption that nitric oxide (NO) acts as a physiological mediator in plants. Understanding its pleiotropic effects requires a deep analysis of the molecular mechanisms underlying its mode of action. In the recent years, efforts have been made in the identification of plant proteins modified by NO at the post-translational level, notably by S-nitrosylation. This reversible process involves the formation of a covalent bond between NO and reactive cysteine residues. This research has now born fruits and numerous proteins regulated by S-nitrosylation have been identified and characterized. This review describes the basic principle of S-n…

0106 biological sciencesPlant ScienceBiology01 natural sciences03 medical and health sciencesS-nitrosothiolMediator[ SDV.SA.AGRO ] Life Sciences [q-bio]/Agricultural sciences/AgronomyGenetics[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyMode of action030304 developmental biologyPlant Proteins0303 health sciencesPost-translational protein modificationsNitric oxideGeneral MedicineS-NitrosylationPlantPlantsS-nitrosylation[SDV.BV.AP]Life Sciences [q-bio]/Vegetal Biology/Plant breedingBiochemistryCovalent bondIdentification (biology)Post-translational protein modificationAgronomy and Crop ScienceProtein Processing Post-TranslationalFunction (biology)010606 plant biology & botanyCysteine
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Nitric oxide: comparative synthesis and signaling in animal and plant cells.

2001

Since its identification as an endothelium-derived relaxing factor in the 1980s, nitric oxide has become the source of intensive and exciting research in animals. Nitric oxide is now considered to be a widespread signaling molecule involved in the regulation of an impressive spectrum of mammalian cellular functions. Its diverse effects have been attributed to an ability to chemically react with dioxygen and its redox forms and with specific iron- and thiol-containing proteins. Moreover, the effects of nitric oxide are dependent on the dynamic regulation of its biosynthetic enzyme nitric oxide synthase. Recently, the role of nitric oxide in plants has received much attention. Plants not only…

0106 biological sciencesPlant ScienceNitric Oxide01 natural sciencesAconitaseRedoxNitric oxide03 medical and health scienceschemistry.chemical_compound[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyAnimals[SDV.BV] Life Sciences [q-bio]/Vegetal BiologyCyclic GMP030304 developmental biologyAconitate HydrataseMammals0303 health sciencesAdenosine Diphosphate RibosebiologyPlantsPlant cellBiosynthetic enzymeNitric oxide synthasechemistryBiochemistrybiology.proteinSignal transductionNitric Oxide SynthaseReactive Oxygen SpeciesSalicylic AcidSalicylic acid010606 plant biology & botanySignal TransductionTrends in plant science
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Plasmodium relictum infection and MHC diversity in the house sparrow (Passer domesticus).

2010

Antagonistic coevolution between hosts and parasites has been proposed as a mechanism maintaining genetic diversity in both host and parasite populations. In particular, the high level of genetic diversity usually observed at the major histocompatibility complex (MHC) is generally thought to be maintained by parasite-driven selection. Among the possible ways through which parasites can maintain MHC diversity, diversifying selection has received relatively less attention. This hypothesis is based on the idea that parasites exert spatially variable selection pressures because of heterogeneity in parasite genetic structure, abundance or virulence. Variable selection pressures should select for…

0106 biological sciencesPlasmodium[ SDV.IMM.IA ] Life Sciences [q-bio]/Immunology/Adaptive immunology01 natural sciencessusceptibilityMajor Histocompatibility Complex[ SDE ] Environmental SciencesGene Frequency[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisResearch ArticlesGeneral Environmental ScienceGenetics0303 health sciencesbiologyPlasmodium relictumGeneral Medicine3. Good health[SDV.IMM.IA]Life Sciences [q-bio]/Immunology/Adaptive immunologyGenetic structure[SDE]Environmental Sciencesavian malariaGeneral Agricultural and Biological SciencesSparrowsMalaria AvianAntagonistic CoevolutionMajor histocompatibility complex010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular Biologyresistance03 medical and health sciencesAvian malariamedicinePasser domesticusAnimalsSelection GeneticAllelesSelection (genetic algorithm)030304 developmental biologyLocal adaptationGenetic diversity[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyGeneral Immunology and Microbiologydiversifying selectionbiology.organism_classificationmedicine.diseaseImmunity InnatePlasmodium relictumbiology.protein[SDE.BE]Environmental Sciences/Biodiversity and Ecology[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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