Search results for "Biological Evolution"

showing 10 items of 522 documents

The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants

2008

We report the draft genome sequence of the model moss Physcomitrella patens and compare its features with those of flowering plants, from which it is separated by more than 400 million years, and unicellular aquatic algae. This comparison reveals genomic changes concomitant with the evolutionary movement to land, including a general increase in gene family complexity; loss of genes associated with aquatic environments (e.g., flagellar arms); acquisition of genes for tolerating terrestrial stresses (e.g., variation in temperature and water availability); and the development of the auxin and abscisic acid signaling pathways for coordinating multicellular growth and dehydration response. The …

DNA RepairRetroelementsPhyscomitrellaArabidopsisPhyscomitrella patensGenes PlantGenomeMagnoliopsidaPhylogeneticsGene DuplicationGene familyAnimalsGenePhylogenyPlant ProteinsRepetitive Sequences Nucleic AcidGeneticsWhole genome sequencingMultidisciplinarybiologyDehydrationfood and beveragesComputational BiologyOryzaSequence Analysis DNAbiology.organism_classificationAdaptation PhysiologicalBiological EvolutionBryopsidaMulticellular organismMultigene FamilyChlamydomonas reinhardtiiGenome PlantMetabolic Networks and PathwaysSignal Transduction
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A novel member of an ancient superfamily: sponge (Geodia cydonium, Porifera) putative protein that features scavenger receptor cysteine-rich repeats

1997

Proteins featuring scavenger receptor cysteine-rich (SRCR) domains are prominent receptors known from vertebrates and from one phylum of invertebrates, the echinoderms. In the present study we report the first putative SRCR protein from the marine sponge Geodia cydonium (Porifera), a member of the lowest phylum of contemporary Metazoans. Two forms of SRCR molecules were characterized, which apparently represent alternative splicing of the same transcript. The long putative SRCR protein, of 1536 aa, features twelve SRCR repeats, a C-terminal transmembrane domain and a cytoplasmic tail. The sequence of the short form is identical with the long form except that it lacks a coding region near th…

DNA ComplementaryMolecular Sequence DataCell-cell recognitionReceptors Cell SurfaceBiologyHomology (biology)PhylogeneticsSequence Homology Nucleic AcidGeneticsAnimalsCoding regionAmino Acid SequenceCysteineCloning MolecularReceptors ImmunologicScavenger receptorConserved SequenceReceptors LipoproteinRepetitive Sequences Nucleic AcidReceptors ScavengerGeneticsBase SequenceC-terminusAlternative splicingMembrane ProteinsGeneral MedicineScavenger Receptors Class BBiological EvolutionPoriferaTransmembrane domainGene
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Molecular cloning of a tyrosine kinase gene from the marine spongeGeodia cydonium: a new member belonging to the receptor tyrosine kinase class II fa…

1994

We have isolated and characterized a cDNA from the marine sponge Geodia cydonium coding for a new member of the tyrosine protein kinase (TK) family. The cDNA encodes a protein of M(r) = 68,710, termed GCTK, which is homologous to class II receptor tyrosine kinases (RTKs). GCTK contains conserved amino acids (aa) characteristic of all protein kinases, and the sequences DLATRN and PIRWMATE which are highly specific for TKs. Furthermore, the sequence N-L-Y-x(3)-Y-Y-R is highly homologous to the sequence D-[LIV]-Y-x(3)-Y-Y-R found only in class II RTKs. The sponge TK, when compared with mammalian class II RTKs, shows maximum 31% homology in the TK domain indicating that this the oldest member o…

DNA ComplementaryMolecular Sequence DataReceptor tyrosine kinaseSH3 domainCytosolAnimalsGeodiaAmino Acid SequenceRNA MessengerCloning MolecularKinase activityTyrosineProtein kinase AMolecular BiologyBase SequenceSequence Homology Amino AcidbiologyCell MembraneReceptor Protein-Tyrosine KinasesCell BiologyProtein-Tyrosine Kinasesbiology.organism_classificationBiological EvolutionMolecular biologyPoriferaMolecular WeightBiochemistryROR1biology.proteinTyrosine kinaseMolecular Membrane Biology
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Immunoglobulin-like domain is present in the extracellular part of the receptor tyrosine kinase from the marine sponge Geodia cydonium.

1994

We have isolated and characterized two cDNAs from the marine sponge Geodia cydonium coding for a new member of a receptor tyrosine kinase of class II. The deduced amino acid sequence shows two characteristic domains: (i) the tyrosine kinase domain; and (ii) and immunoglobulin-like domain. The latter part shows high homology to the vertebrate C2 type immunoglobulin domain. This result demonstrates that immunoglobulin domains are not recent achievements of higher animals but exist also in those animals which have diverged from other organisms about 800 million years ago.

DNA ComplementarybiologySequence Homology Amino AcidMolecular Sequence DatamyrImmunoglobulinsReceptor Protein-Tyrosine KinasesImmunoglobulin domainSH2 domainBiological EvolutionReceptor tyrosine kinasePoriferaProtein Structure TertiaryBiochemistryStructural BiologyPhylogeneticsMultigene FamilyROR1biology.proteinAnimalsAmino Acid SequenceMolecular BiologyPeptide sequenceTyrosine kinaseSequence AlignmentJournal of molecular recognition : JMR
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Social transmission in the wild can reduce predation pressure on novel prey signals

2021

Funder: Suomen Kulttuurirahasto (Finnish Cultural Foundation); doi: https://doi.org/10.13039/501100003125

DYNAMICS0106 biological sciences0301 basic medicineINFORMATIONBehavioural ecologyAVOIDANCEGeneral Physics and AstronomyPREFERENCESALTERNATIVE PREYEvolutionary ecology01 natural sciencesConformityPredationlaw.inventionlaw/631/181/2481kulttuurievoluutioPasseriformesCOLORATIONcultural evolutionsinitiainenmedia_commoneducation.field_of_studyMultidisciplinarybiologyEcologyCyanistesQarticlebehavioural ecologyCONFORMITYtalitiainenBiological Evolutionsosiaalinen oppiminen/631/158/856evoluutioekologiaTransmission (mechanics)/631/158/8571181 Ecology evolutionary biologycoevolution/631/181/1403media_common.quotation_subjectSciencePopulationCultural evolutioneläinten käyttäytyminen010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesGREGARIOUSNESSAvoidance LearningJuvenileAnimalsSelection GeneticeducationEvolutionary dynamicsSocial BehaviorParusGeneral Chemistrybiology.organism_classificationBLACKBIRDSPrunus dulcisEVOLUTIONsaalistusUnited Kingdom030104 developmental biologyPredatory Behaviorevolutionary ecologyRemote Sensing TechnologyVocalization AnimalCoevolutionNature Communications
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Intestinal helminth communities of the long-finned pilot whale (Globicephala melas) off the Faroe Islands.

1993

SUMMARYThe intestines of 170 long-finned pilot whales, Globicephala melas, caught off the Faroe Islands (N.E. Atlantic) were examined for helminth parasites. Eight species were detected but only 4 occurred in at least 10% of the sample. No core or recurrent group of species were identified and no correlations between abundances of species were significant. Diversity values were far below those reported for other endotherms. Colonization by helminths was random, whales not being readily colonized. These features point to largely unpredictable, isolationist infracommunities, there being little potential for inter-specific interactions. Older hosts tended to harbour more diverse infracommuniti…

DenmarkCetaceaPilot whaleAcanthocephalaHelminthsparasitic diseasesHelminthsAnimalsAtlantic OceanbiologyCommunityEcologyEcologyMarine habitatsWhalesSpecies diversitybiology.organism_classificationGlobicephala melasBiological EvolutionIntestinesInfectious DiseasesCestodaAnimal Science and ZoologyParasitologySpecies richnessTrematodaParasitology
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Sequencing ancient calcified dental plaque shows changes in oral microbiota with dietary shifts of the Neolithic and Industrial revolutions

2013

The importance of commensal microbes for human health is increasingly recognized, yet the impacts of evolutionary changes in human diet and culture on commensal microbiota remain almost unknown. Two of the greatest dietary shifts in human evolution involved the adoption of carbohydrate-rich Neolithic (farming) diets (beginning ∼10,000 years before the present) and the more recent advent of industrially processed flour and sugar (in ∼1850). Here, we show that calcified dental plaque (dental calculus) on ancient teeth preserves a detailed genetic record throughout this period. Data from 34 early European skeletons indicate that the transition from hunter-gatherer to farming shifted the oral m…

Dental PlaqueBiologyDental plaqueArticleCariogenic bacteriaOral MicrobiotaHuman healthGeneticsmedicineHumansIndustrybusiness.industryEcologyCalculus (dental)Mouth MucosaHigh-Throughput Nucleotide Sequencingmedicine.diseaseBiological EvolutionDietstomatognathic diseasesArchaeologyHuman evolutionAgricultureMetagenomicsMetagenomebusinessNature Genetics
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High temperature and bacteriophages can indirectly select for bacterial pathogenicity in environmental reservoirs

2010

The coincidental evolution hypothesis predicts that traits connected to bacterial pathogenicity could be indirectly selected outside the host as a correlated response to abiotic environmental conditions or different biotic species interactions. To investigate this, an opportunistic bacterial pathogen, Serratia marcescens, was cultured in the absence and presence of the lytic bacteriophage PPV (Podoviridae) at 25°C and 37°C for four weeks (N = 5). At the end, we measured changes in bacterial phage-resistance and potential virulence traits, and determined the pathogenicity of all bacterial selection lines in the Parasemia plantaginis insect model in vivo. Selection at 37°C increased bacterial…

Disease reservoirHot TemperatureMovementlcsh:MedicineVirulenceMothsMicrobiologyMicrobial EcologyMicrobiologyBacteriophage03 medical and health sciencesEnvironmental MicrobiologyAnimalslcsh:ScienceBiologyPathogenSerratia marcescens1183 Plant biology microbiology virologyDisease Reservoirs030304 developmental biologyAbiotic componentEvolutionary Biology0303 health sciencesMultidisciplinaryBiotic componentEcologybiology030306 microbiologylcsh:RPodoviridaebiology.organism_classificationBiological EvolutionSurvival AnalysisBacterial PathogensLytic cycleEvolutionary EcologyLarvaHost-Pathogen InteractionsMicrobial Evolutionlcsh:QBacteriaResearch Article
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Bilabiate Flowers: The Ultimate Response to Bees?

2007

† Background and Aims Bilabiate flowers have evolved in many lineages of the angiosperms, thus representing a convincing example of parallel evolution. Similar to keel blossoms, they have obviously evolved in order to protect pollen against pollen-collecting bees. Although many examples are known, a comprehensive survey on floral diversity and functional constraints of bilabiate flowers is lacking. Here, the concept is widened and described as a general pattern. † Methods The present paper is a conceptional review including personal observations of the authors. To form a survey on the diversity of bilabiate blossoms, a search was made for examples across the angiosperms and these were combi…

DorsumPollinationEcologyLamialesBiodiversityFeeding BehaviorFlowersPlant ScienceBeesBiologybiology.organism_classificationmedicine.disease_causeBiological EvolutionMagnoliopsidaInflorescencePollenmedicineAnimalsPollenGeneral patternFunctional significanceParallel evolutionFloral Biology of the LamiaceaeAnnals of Botany
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DEVELOPMENTAL ASPECTS OF DRUG METABOLISM

1977

Publisher Summary This chapter discusses the developmental aspects of drug metabolism and those of other biological phenomena that are twofold. Development is described by examining various species of different levels of biological evolution or by studying the ontogenetic evolvement of the features in question in one animal species or groups of related species. A review on diene-organochlorine insecticides epitomizes the fact that insects, birds, and fish possess the enzymatic mechanisms for epoxidation of these insecticides to only a slightly less degree than do mammals. Thus, the ability to oxidize foreign compounds does not seem to be restricted to animals of higher organization, and con…

DrugOxidative metabolismbusiness.industryOntogenymedia_common.quotation_subjectInsectBiological evolutionPharmacologyBiologyHydroxylationchemistry.chemical_compoundBiochemistrychemistryMedicinebusinessAnimal speciesDrug metabolismmedia_common
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