Search results for "Biological system"
showing 10 items of 319 documents
Symbiotic underground biodiversity and plant productivity
2007
National audience
The Advances and Challenges of Liposome-Assisted Drug Release in the Presence of Serum Albumin Molecules: The Influence of Surrounding pH
2022
The aim of this study is to prepare a liposomal delivery system for 5-methyl-12 (H)-quino[3,4-b]-1,4-benzothiazine chloride (5-MBT) and study the in vitro release characteristics. The release of 5-MBT from a liposomal complex with human serum albumin (HSA) [LDPPC/5-MBT]:HSA was examined using the spectrophotometric method and differential scanning calorimetry (DSC). Electronic paramagnetic resonance was used to assess the influence of the pH of the environment on the conformation of phospholipids, the latter determining the degree of release of the encapsulated compound. The applied mathematical models made it possible to determine the necessary analytical parameters to facilitate the proce…
Local vs global motions in protein folding
2013
It is of interest to know whether local fluctuations in a polypeptide chain play any role in the mechanism by which the chain folds to the native structure of a protein. This question is addressed by analyzing folding and non-folding trajectories of a protein; as an example, the analysis is applied to the 37-residue triple β-strand WW domain from the Formin binding protein 28 (FBP28) (PDB ID: 1E0L). Molecular dynamics (MD) trajectories were generated with the coarse-grained united-residue force field, and one- and two-dimensional free-energy landscapes (FELs) along the backbone virtual-bond angle θ and backbone virtual-bond-dihedral angle γ of each residue, and principal components, respect…
Visible-NIR reflectance spectroscopy and manifold learning methods applied to the detection of fungal infections on citrus fruit
2015
Abstract The development of systems for automatically detecting decay in citrus fruit during quality control is still a challenge for the citrus industry. The feasibility of reflectance spectroscopy in the visible and near infrared (NIR) regions was evaluated for the automatic detection of the early symptoms of decay caused by Penicillium digitatum fungus in citrus fruit. Reflectance spectra of sound and decaying surface parts of mandarins cv. ‘Clemenvilla’ were acquired in two different spectral regions, from 650 nm to 1050 nm (visible–NIR) and from 1000 nm to 1700 nm (NIR), pointing to significant differences in spectra between sound and decaying skin for both spectral ranges. Three diffe…
Multi-scale simulations of polymeric nanoparticle aggregation during rapid solvent exchange.
2018
Using a multi-scale approach which combines both molecular dynamics (MD) and kinetic Monte Carlo (KMC) simulations, we study a simple and scalable method for fabricating charge-stabilized nanoparticles through a rapid solvent exchange, i.e., Flash NanoPrecipitation (FNP). This multi-scale approach is based on microscopic information from MD simulations and uses a KMC algorithm to access macroscopic length- and time scales, which allows direct comparison with experiments and quantitative predictions. We find good agreement of our simulation results with the experiments. In addition, the model allows us to understand the aggregation mechanism on both microscopic and macroscopic levels and det…
Use of transmission electron microscopy to obtain quantitative information about polymers
2005
In the polymer field the electron microscope is frequently used as a tool for obtaining purely qualitative data, but only rarely to obtain quantitative information. In order to discuss the potential of this instrument for the latter purpose it is convenient to separate the discussion into the following sub-sections.
Formalisation and methods of analysis of the fast xenobiotic mass transfer in the body
2009
Convergent Morphological Evolution in Silene Sect. Italicae (Caryophyllaceae) in the Mediterranean Basin
2022
Recent divergence can obscure species boundaries among closely related taxa. Silene section Italicae (Caryophyllaceae) has been taxonomically controversial, with about 30 species described. We investigate species delimitation within this section using 500 specimens sequenced for one nuclear and two plastid markers. Despite the use of a small number of genes, the large number of sequenced samples allowed confident delimitation of 50% of the species. The delimitation of other species (e.g., Silene nemoralis, S. nodulosa and S. andryalifolia) was more challenging. We confirmed that seven of the ten chasmophyte species in the section are not related to each other but are, instead, genetically c…
LightSleepNet: A Lightweight Deep Model for Rapid Sleep Stage Classification with Spectrograms.
2021
Deep learning has achieved unprecedented success in sleep stage classification tasks, which starts to pave the way for potential real-world applications. However, due to its enormous size, deployment of deep neural networks is hindered by high cost at various aspects, such as computation power, storage, network bandwidth, power consumption, and hardware complexity. For further practical applications (e.g., wearable sleep monitoring devices), there is a need for simple and compact models. In this paper, we propose a lightweight model, namely LightSleepNet, for rapid sleep stage classification based on spectrograms. Our model is assembled by a much fewer number of model parameters compared to…
Differences in Chromatic Sensitivity Estimated Using Static and Dynamic Colour Stimuli
2017
Abstract The current study reports on a novel computerised colour vision test employing static and dynamic stimuli. The aim of the study was to assess if static and dynamic stimuli result in comparable chromatic discrimination thresholds when participant’s age is taken into account. Participants (n = 20) were 21 to 77 years old, had normal colour vision and no history of any eye disease. They all participated in two sessions estimating chromatic sensitivity with static and dynamic stimuli, respectively, with six directions in colour space varying either along the red-green (RG) or yellow- blue (YB) directions. We found no significant differences in chromatic thresholds along a tritan axis o…