Search results for "Biomedical engineering"

showing 10 items of 2020 documents

Dual-beam confocal light-sheet microscopy via flexible acousto-optic deflector

2019

Confocal detection in digital scanned laser light-sheet fluorescence microscopy (DSLM) has been established as a gold standard method to improve image quality. The selective line detection of a complementary metal-oxide-semiconductor camera (CMOS) working in rolling shutter mode allows the rejection of out-of-focus and scattered light, thus reducing background signal during image formation. Most modern CMOS have two rolling shutters, but usually only a single illuminating beam is used, halving the maximum obtainable frame rate. We report on the capability to recover the full image acquisition rate via dual confocal DSLM by using an acoustooptic deflector. Such a simple solution enables us t…

Image formationPaperMaterials scienceImage qualityConfocalBiomedical Engineeringacousto-optic deflector; confocal detection; digital scanned laser light-sheet fluorescence microscopy; high contrast; high-throughput microscopy; light-sheet microscopy; mouse brain; zebrafish brainconfocal detection01 natural scienceslaw.invention010309 opticsBiomaterialsMiceacousto-optic deflectorOpticslaw0103 physical sciencesMicroscopyImage Processing Computer-AssistedAnimalsZebrafishhigh-throughput microscopyconfocal light-sheet microscopyMicroscopyMicroscopy Confocalbusiness.industryhigh contrastRolling shutterBrainEquipment DesignLaserFrame ratezebrafish brainAtomic and Molecular Physics and OpticsElectronic Optical and Magnetic MaterialsHigh-Throughput Screening AssaysMice Inbred C57BLdigital scanned laser light-sheet fluorescence microscopyMicroscopy FluorescenceLight sheet fluorescence microscopyLarvamouse brainbusinesslight-sheet microscopyJournal of Biomedical Optics
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Effect of platform switching on the peri-implant bone: A finite element study

2015

Background: There exists a relation between the presence and location of the micro-gap and the loss of peri-implant bone. Several authors have shown that the treatments based on the use of platform switching result in less peri-implant bone loss and an increased tissue stability. The purpose of this study was to analyse the effect of the platform switching on the distribution of stresses on the peri-implant bone using the finite element method. Material and Methods: A realistic 3D full-mandible finite element model representing cortical bone and trabecular bone was used to study the distribution of the stress on the bone induced by an implant of diameter 4.1 mm. Two abutments were modelled.…

Implantes dentalesMaterials scienceResearchOsteólisisPlatform switchingOdontologíaPeri implant bone:CIENCIAS MÉDICAS [UNESCO]BioinformaticsCiencias de la saludFinite element methodFinite element studyMasticatory forceStress (mechanics)medicine.anatomical_structureUNESCO::CIENCIAS MÉDICASmedicineCortical boneImplantImplantologyGeneral DentistryBiomedical engineeringJournal of Clinical and Experimental Dentistry
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Wavefront holoscopy: application of digital in-line holography for the inspection of engraved marks in progressive addition lenses

2014

Progressive addition lenses (PALs) are engraved with permanent marks at standardized locations in order to guarantee correct centering and alignment throughout the manufacturing and mounting processes. Out of the production line, engraved marks provide useful information about the PAL as well as act as locator marks to re-ink again the removable marks. Even though those marks should be visible by simple visual inspection with the naked eye, engraving marks are often faint and weak, obscured by scratches, and partially occluded and difficult to recognize on tinted or antireflection-coated lenses. Here, we present an extremely simple optical device (named as wavefront holoscope) for visualiza…

In line holographyComputer scienceHolographyNormal DistributionBiomedical EngineeringHolographyDiagnostic Techniques OphthalmologicalEngravinglaw.inventionBiomaterialsAutomationImaging Three-DimensionalOpticslawMaterials TestingImage Processing Computer-AssistedHumansComputer visionLensesProgressive addition lensesWavefrontLaser engravingbusiness.industryLasersReproducibility of ResultsEquipment DesignAtomic and Molecular Physics and OpticsElectronic Optical and Magnetic MaterialsVisualizationEyeglassesvisual_artCalibrationvisual_art.visual_art_mediumArtificial intelligencebusinessAlgorithmsDigital holographyJournal of Biomedical Optics
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Revisited BIA-MS combination: Entire "on-a-chip" processing leading to the proteins identification at low femtomole to sub-femtomole levels

2008

International audience; We present the results of a study in which biomolecular interaction analysis (BIA, Biacore 2000) was combined with mass spectrometry (MS) using entire "on-a-chip" procedure. Most BIA-MS studies included an elution step of the analyte prior MS analysis. Here, we report a low-cost approach combining Biacore analysis with homemade chips and MS in situ identification onto the chips without elution step. First experiments have been made with rat serum albumin to determine the sensitivity and validation of the concept has been obtained with an antibody/antigen couple. Our "on-a-chip" procedure allowed complete analysis by MS-MS of the biochip leading to protein identificat…

In situMALDI-TOFAnalyte[ SDV.BBM.BP ] Life Sciences [q-bio]/Biochemistry Molecular Biology/BiophysicsBiomedical EngineeringBiophysicsAnalytical chemistrySPRBiosensing TechniquesMass spectrometry01 natural sciencesSensitivity and Specificity03 medical and health sciencesProtein Interaction MappingElectrochemistryNanotechnologyBIA-MSBiochipChromatography High Pressure Liquid030304 developmental biology0303 health sciencesChromatographyprotein complexesElutionChemistryMicrochemistry010401 analytical chemistryMs analysisReproducibility of ResultsGeneral MedicineEquipment DesignMicrofluidic Analytical Techniques0104 chemical sciencesEquipment Failure Analysis[SDV.BBM.BP]Life Sciences [q-bio]/Biochemistry Molecular Biology/BiophysicsMatrix-assisted laser desorption/ionizationSAMSpectrometry Mass Matrix-Assisted Laser Desorption-IonizationBiotechnology
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Using ultrasound transmission velocity to analyse the mechanical properties of teeth after in vitro, in situ, and in vivo irradiation.

2000

Ultrasound transmission velocity (UTV) in isotropic material as a measure for the modulus of elasticity was correlated to mechanical properties. Changes in micromechanical properties of radiated teeth and influence of the oral cavity were to be evaluated nondestructively. UTV was measured in extracted teeth after 36 Gy and 62 Gy of in situ (enorally, with no contact to the oral cavity) and in vitro irradiation. Relative to controls, teeth subjected to 62 Gy in vivo showed higher UTV values for dentine and enamel. Sound teeth irradiated with 60 Gy in situ also showed higher UTV values for enamel, whereas dentine values were not significantly different from those of control. The mechanical pr…

In situMaleMaterials scienceDentistryYoung's modulusDental CariesOral cavityStatistics Nonparametricsymbols.namesakestomatognathic systemIn vivoHumansIrradiationDental EnamelRadiation InjuriesGeneral DentistryUltrasonographyTooth CrownEnamel paintbusiness.industryUltrasoundReproducibility of ResultsDose-Response Relationship RadiationMiddle AgedMolarIn vitroElasticitystomatognathic diseasesHead and Neck Neoplasmsvisual_artDentinvisual_art.visual_art_mediumsymbolsFemaleCranial IrradiationbusinessToothBiomedical engineeringClinical oral investigations
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Synthesis and in Vitro Evaluation of Biotinylated RG108:  A High Affinity Compound for Studying Binding Interactions with Human DNA Methyltransferases

2006

Small-molecule inhibitors of DNA methyltransferases such as RG108 represent promising candidates for cancer drug development. We report the synthesis and in vitro analysis of a biotinylated RG108 conjugate, 2-(1,3-dioxo-1,3-dihydro-isoindol-2-yl)-3-(5-[3-[5-(2-oxo-hexahydro-thieno[3,4-d]imidazol-4-yl)pentanoylamino]propoxy]-1H-indol-3-yl)propionic acid (bio-RG108), for the evaluation of interactions with DNA methyltransferase enzymes. The structural design of the chemically modified inhibitor was aided by molecular modeling, which suggested the possibility for extensive chemical modifications at the 5-position of the tryptophan moiety in RG108. The inhibitory activity of the corresponding d…

IndolesMethyltransferaseMolecular modelStereochemistryBiomedical EngineeringBiotinPharmaceutical SciencePhthalimidesBioengineeringDNA methyltransferaseCell-free systemchemistry.chemical_compoundAffinity chromatographyHumansDNA Modification MethylasesNuclear Magnetic Resonance BiomolecularPharmacologychemistry.chemical_classificationCell-Free SystemMolecular StructureChemistryOrganic ChemistryTryptophanEnzymeBiochemistryBiotinylationPropionatesDNAProtein BindingBiotechnologyBioconjugate Chemistry
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PASSIM – an open source software system for managing information in biomedical studies

2007

Abstract Background One of the crucial aspects of day-to-day laboratory information management is collection, storage and retrieval of information about research subjects and biomedical samples. An efficient link between sample data and experiment results is absolutely imperative for a successful outcome of a biomedical study. Currently available software solutions are largely limited to large-scale, expensive commercial Laboratory Information Management Systems (LIMS). Acquiring such LIMS indeed can bring laboratory information management to a higher level, but often implies sufficient investment of time, effort and funds, which are not always available. There is a clear need for lightweig…

Information managementBiomedical ResearchDatabases FactualMedical Records Systems ComputerizedComputer scienceBiomedical EngineeringInformation Storage and RetrievalSample (statistics)lcsh:Computer applications to medicine. Medical informaticsBiochemistryWorld Wide WebUser-Computer InterfaceDocumentationSoftwareArtificial IntelligenceStructural BiologyConfidentialitylcsh:QH301-705.5Molecular BiologyClinical Trials as Topicbusiness.industryApplied MathematicsSubject (documents)Computer Science ApplicationsManagement information systemslcsh:Biology (General)Database Management Systemslcsh:R858-859.7Programming LanguagesUser interfacebusinessSoftware
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Causal brain-heart information transfer during visual emotional elicitation in healthy subjects: Preliminary evaluations and future perspectives

2017

Complex heartbeat dynamics is known to reflect subject's emotional state, thanks to numerous links to brain cortical and subcortical regions. Likewise, specific brain regions are deeply involved in vagally-mediated emotional processing and regulation. Nevertheless, although the brain-heart interplay has been studied during visual emotion elicitation, directional interactions have not been investigated so far. To fill this gap, in this study we investigate brain-heart dynamics during emotional elicitation in healthy subjects through measures of Granger causality (GC) between the two physiological systems. Data were gathered from 22 healthy volunteers who underwent pleasant/ unpleasant affect…

Information transferHeartbeatPhotic StimulationEmotionsBiomedical EngineeringSignal Processing; Biomedical Engineering; 1707; Health InformaticsHealth InformaticsElectroencephalography01 natural sciencesBrain mappingLateralization of brain function010305 fluids & plasmasDevelopmental psychology03 medical and health sciences0302 clinical medicineHeart Rate0103 physical sciencesmedicinePrefrontal cortexInternational Affective Picture System1707Brain Mappingmedicine.diagnostic_testBrainElectroencephalographyHealthy VolunteersSettore ING-INF/06 - Bioingegneria Elettronica E InformaticaSignal ProcessingPsychologyPhotic Stimulation030217 neurology & neurosurgeryCognitive psychology
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Compensating for instantaneous signal mixing in transfer entropy analysis of neurobiological time series

2013

The transfer entropy (TE) has recently emerged as a nonlinear model-free tool, framed in information theory, to detect directed interactions in coupled processes. Unfortunately, when applied to neurobiological time series TE is biased by signal cross-talk due to volume conduction. To compensate for this bias, in this study we introduce a modified TE measure which accounts for possible instantaneous effects between the analyzed time series. The new measure, denoted as compensated TE (cTE), is tested on simulated time series reproducing conditions typical of neuroscience applications, and on real magnetoencephalographic (MEG) multi-trial data measured during a visuo-tactile cognitive experime…

Information transferTime FactorsComputer scienceEntropySpeech recognitionBiomedical EngineeringHealth InformaticsInformation theoryEntropy (classical thermodynamics)medicineHumansEntropy (information theory)Computer SimulationNervous System Physiological PhenomenaEntropy (energy dispersal)Entropy (arrow of time)Visual Cortex1707Entropy (statistical thermodynamics)MagnetoencephalographySignal Processing Computer-AssistedSomatosensory CortexNonlinear systemVisual cortexmedicine.anatomical_structureSignal ProcessingSettore ING-INF/06 - Bioingegneria Elettronica E InformaticaTransfer entropyAlgorithmEntropy (order and disorder)
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Information Transfer Between Respiration and Heart Rate During Sleep Apnea

2016

It is well-known that sleep apnea affects the respiration and the heart rate (HR), and studies have shown that the cardiorespiratory coupling is also compromised during obstructive sleep apnea (OSA). Furthermore, the classification of hypopneas is challenging, in particular when only ECG-derived features are used. In this context, this study investigates how different ECG-derived respiratory (EDR) signals resemble the respiratory effort during different types of apneas, and how the amount of information transferred from respiration to HR varies according to the respiratory signal used, real or ECG-derived. ECG and respiratory signals of 10 patients suffering from sleep apnea were analysed, …

Information transferbusiness.industryComputer Science (all)0206 medical engineeringSleep apneaContext (language use)Cardiorespiratory fitness02 engineering and technologymedicine.disease020601 biomedical engineering01 natural sciencesrespiratory tract diseases010305 fluids & plasmasObstructive sleep apneaAnesthesiaSettore ING-INF/06 - Bioingegneria Elettronica E Informatica0103 physical sciencesHeart rateRespirationmedicineRespiratory systemCardiology and Cardiovascular Medicinebusiness2016 Computing in Cardiology Conference (CinC)
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