Search results for "Biomineralization"

showing 10 items of 131 documents

Unveiling the evolution of bivalve nacre proteins by shell proteomics of Unionoidae.

2015

The formation of the molluscan shell nacre is regulated to a large extent by a matrix of extracellular macromolecules that are secreted by the shell forming tissue, the mantle. This so called “calcifying matrix” is a complex mixture of proteins and glycoproteins that is assembled and occluded within the mineral phase during the calcification process. While the importance of the calcifying matrix to shell formation has long been appreciated, the molecular basis that dictates nacre formation remains largely uncharacterized.Recent expressed sequence tag (EST) investigations of the freshwater mussels (Elliptio complanata and Villosa leinosa) provide an opportunity to further characterize the pr…

0301 basic medicineProteomics03 medical and health sciences[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]General Materials Science14. Life underwaterMantle (mollusc)Bivalve shell[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsComputingMilieux_MISCELLANEOUSchemistry.chemical_classificationVillosabiologyMechanical EngineeringPearl oysterElliptiobiology.organism_classification[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/Biomaterials[SDV.IB.BIO] Life Sciences [q-bio]/Bioengineering/Biomaterials030104 developmental biologychemistryBiochemistryMechanics of Materials[ SDV.BBM.GTP ] Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN][SDV.BBM.GTP] Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]GlycoproteinBiomineralization
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Gadolinium perturbs expression of skeletogenic genes, calcium uptake and larval development in phylogenetically distant sea urchin species

2018

Chelates of Gadolinium (Gd), a lanthanide metal, are employed as contrast agents for magnetic resonance imaging and are released into the aquatic environment where they are an emerging contaminant. We studied the effects of environmentally relevant Gd concentrations on the development of two phylogenetically and geographically distant sea urchin species: the Mediterranean Paracentrotus lividus and the Australian Heliocidaris tuberculata. We found a general delay of embryo development at 24 h post-fertilization, and a strong inhibition of skeleton growth at 48 h. Total Gd and Ca content in the larvae showed a time- and concentration-dependent increase in Gd, in parallel with a reduction in C…

0301 basic medicineVascular Endothelial Growth Factor AHealth Toxicology and MutagenesisGadoliniumchemistry.chemical_elementEmbryonic DevelopmentGadolinium010501 environmental sciencesAquatic ScienceMarine pollutionReal-Time Polymerase Chain ReactionEcotoxicology01 natural sciencesParacentrotus lividus03 medical and health sciencesMedical agentTransforming Growth Factor betabiology.animalSkeletogenesisAnimalsAnthocidarisAxis specificationSettore BIO/06 - Anatomia Comparata E CitologiaSea urchin embryoSea urchinGenePhylogeny0105 earth and related environmental sciencesLarvabiologysea urchin development gadolinium teratogenesis skeletogenesis calcium.EcologyEmbryogenesisbiology.organism_classificationCell biologyFibroblast Growth Factors030104 developmental biologychemistryLarvaParacentrotusCalciumGene expressionWater Pollutants ChemicalBiomineralization
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The ‘Shellome’ of the Crocus Clam Tridacna crocea Emphasizes Essential Components of Mollusk Shell Biomineralization

2021

Molluscan shells are among the most fascinating research objects because of their diverse morphologies and textures. The formation of these delicate biomineralized structures is a matrix-mediated process. A question that arises is what are the essential components required to build these exoskeletons. In order to understand the molecular mechanisms of molluscan shell formation, it is crucial to identify organic macromolecules in different shells from diverse taxa. In the case of bivalves, however, taxon sampling in previous shell proteomics studies are focused predominantly on representatives of the class Pteriomorphia such as pearl oysters, edible oysters and mussels. In this study, we hav…

0301 basic medicine[CHIM.POLY] Chemical Sciences/Polymers[SPI.GPROC] Engineering Sciences [physics]/Chemical and Process EngineeringproteomeTridacna croceaJAPANESE PEARL OYSTERQH426-470[SPI.MAT] Engineering Sciences [physics]/Materials[SPI.MAT]Engineering Sciences [physics]/Materials03 medical and health sciences[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]Genetics[SPI.GPROC]Engineering Sciences [physics]/Chemical and Process Engineering14. Life underwaterMolluscaGenetics (clinical)Original Research030102 biochemistry & molecular biologybiology[CHIM.ORGA]Chemical Sciences/Organic chemistryfungibiology.organism_classificationBivalviabiomineralization[CHIM.ORGA] Chemical Sciences/Organic chemistryTridacnaPteriomorphiaMytilusBivalvia030104 developmental biology[CHIM.POLY]Chemical Sciences/PolymersEvolutionary biologyMolluscaProteomeMolecular Medicineshell formationHeterodontatranscriptomeBiomineralization
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Hierarchical architecture of sponge spicules: biocatalytic and structure-directing activity of silicatein proteins as model for bioinspired applicati…

2016

Since the first description of the silicateins, a group of enzymes that mediate the formation of the amorphous, hydrated biosilica of the skeleton of the siliceous sponges, much progress has been achieved in the understanding of this biomineralization process. These discoveries include, beside the proof of the enzymatic nature of the sponge biosilica formation, the dual property of the enzyme, to act both as a structure-forming and structure-guiding protein, and the demonstration that the initial product of silicatein is a soft, gel-like material that has to undergo a maturation process during which it achieves its favorable physical-chemical properties allowing the development of various t…

0301 basic medicinebiologyProtein ConformationChemistryBiophysicsNanotechnologybiology.organism_classificationCathepsinsBiochemistryPorifera03 medical and health sciencesSponge030104 developmental biologySponge spiculeBiomimetic MaterialsAnimalsMolecular MedicineMaturation processEngineering (miscellaneous)BiotechnologyBiomineralizationBioinspiration & Biomimetics
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The shell of the invasive bivalve species Dreissena polymorpha: biochemical, elemental and textural Investigations.

2016

28 pages; International audience; The zebra mussel Dreissena polymorpha is a well-established invasive model organism. Although extensively used in environmental sciences, virtually nothing is known of the molecular process of its shell calcification. By describing the microstructure, geochemistry and biochemistry/proteomics of the shell, the present study aims at promoting this species as a model organism in biomineralization studies, in order to establish a bridge with ecotoxicology, while sketching evolutionary conclusions. The shell of D. polymorpha exhibits the classical crossed-lamellar/complex crossed lamellar combination found in several heterodont bivalves, in addition to an extern…

0301 basic medicinelcsh:MedicineInvasive Species010501 environmental sciencesProteomicsEcotoxicology01 natural sciencesBiochemistrychemistry.chemical_compoundDatabase and Informatics MethodsMaterials PhysicsLectinsMusselslcsh:ScienceMicrostructureGel ElectrophoresisStainingMineralsMultidisciplinarybiologyOrganic CompoundsPhysicsMonosaccharidesBiological EvolutionEuropeChemistry[ SDV.BBM.GTP ] Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]Physical SciencesFranceSequence AnalysisResearch ArticleSilver StainingBivalvesMaterials ScienceShell (structure)CarbohydratesSequence DatabasesElectrophoretic StainingResearch and Analysis MethodsDreissenaDreissenaCoomassie Blue staining03 medical and health sciencesElectrophoretic TechniquesSpecies ColonizationAnimal Shells[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]Botany[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyEcotoxicologyAnimals[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular Biology14. Life underwaterShell calcificationMolecular Biology TechniquesSequencing Techniques[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsMolecular Biology[ SDV.BBM ] Life Sciences [q-bio]/Biochemistry Molecular Biology0105 earth and related environmental scienceslcsh:ROrganic ChemistryEcology and Environmental SciencesOrganismsChemical CompoundsBiology and Life SciencesProteinsMolluscs[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/Biomaterialsbiology.organism_classificationInvertebrates030104 developmental biologyCalcium carbonateBiological DatabaseschemistrySpecimen Preparation and TreatmentZebra mussellcsh:QIntroduced SpeciesBiomineralization
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Biomineralization toolkit: the importance of sample cleaning prior to the characterization of biomineral proteomes.

2013

In an interesting work published recently in PNAS, Drake et al. (1) presented a proteomic study of the skeleton from the stony coral Stylophora pistillata . This study identified proteins that are associated to the mineral phase (i.e., that potentially contribute to shape the skeleton). In other words, this set of proteins is supposed to represent the so-called “biomineralization toolkit.” Although some of the 36 proteins reported in Drake et al. (1) appear as genuine extracellular matrix (ECM) proteins related to biomineralization, such as coral acid-rich proteins or carbonic anhydrase, some others are obvious intracellular contaminants that should not be considered as skeletal organic mat…

0303 health sciencesMultidisciplinaryAnatomyBiologyStylophora pistillata010502 geochemistry & geophysicsbiology.organism_classificationAnthozoa[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/Biomaterials01 natural sciencesExtracellular matrix03 medical and health sciencesBiochemistryProteomeAnimalsOrganic matrixLetters[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsCytoskeletonComputingMilieux_MISCELLANEOUS030304 developmental biology0105 earth and related environmental sciencesBiomineralization
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Silicateins, silicatein interactors and cellular interplay in sponge skeletogenesis: formation of glass fiber-like spicules

2012

Biomineralization processes are characterized by controlled deposition of inorganic polymers/minerals mediated by functional groups linked to organic templates. One metazoan taxon, the siliceous sponges, has utilized these principles and even gained the ability to form these polymers/minerals by an enzymatic mechanism using silicateins. Silicateins are the dominant protein species present in the axial canal of the skeletal elements of the siliceous sponges, the spicules, where they form the axial filament. Silicateins also represent a major part of the organic components of the silica lamellae, which are cylindrically arranged around the axial canal. With the demosponge Suberites domuncula …

0303 health sciencesSpiculebiology02 engineering and technologyCell BiologyAnatomyFlagellum021001 nanoscience & nanotechnologybiology.organism_classificationBiochemistrySuberites domuncula03 medical and health sciencesSpongeSponge spiculeDemospongeBiophysics0210 nano-technologyMolecular Biology030304 developmental biologySclerocyteBiomineralizationFEBS Journal
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Crystal fabrics and element impurities (Sr/Ca, Mg/Ca, and Ba/Ca) in shells of Arctica islandica—Implications for paleoclimate reconstructions

2013

Sr/Ca, Mg/Ca and Ba/Ca values are heterogeneously distributed in shells of Arctica islandica. These patterns are largely associated with crystal fabrics (size, habit and orientation of crystals) or the processes controlling them. The outer sublayer of the outer shell layer (oOSL; homogenous and irregular simple prismatic crystal fabrics,) contained element/Ca values up to 62% higher than the inner sublayer (iOSL; crossed-acicular, crossed-lamellar, fine crossed-lamellar and irregular simple prismatic crystal fabrics). A gradual decrease in Sr/Ca and Mg/Ca values was observed from the outer portions of the oOSL toward the oOSL/iOSL transition zone. This chemical shift was accompanied by a gr…

AcicularbiologyAnalytical chemistryPaleontologyMineralogyOceanographybiology.organism_classificationCrystalImpurityTransition zoneSeawaterBivalve shellArctica islandicaEcology Evolution Behavior and SystematicsGeologyEarth-Surface ProcessesBiomineralizationPalaeogeography, Palaeoclimatology, Palaeoecology
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Evidence of noncentrosymmetry of human tooth hydroxyapatite crystals

2014

Herein, we investigate human single hydroxyapatite crystals (enamel and dentine) by convergent-beam electron diffraction (CBED) and automated electron-diffraction tomography (ADT). The CBED pattern shows the absence of the mirror plane perpendicular to the c axis leading to the P63 space group instead of the P63 /m space group considered for larger-scale crystals, this is confirmed by ADT. This experimental evidence is of prime importance for understanding the morphogenesis and the architectural organization of calcified tissues.

AdultMaleatomic structuresCatalysisX-Ray DiffractionHuman toothmedicineHydroxidesHumansDental Enamelatomic structures; biomineralization; human tooth crystals; noncentrosymmetry; piezoelectricityEnamel paintpiezoelectricityChemistryOrganic ChemistrySpectrometry X-Ray EmissionGeneral Chemistrybiomineralizationnoncentrosymmetrystomatognathic diseasesCrystallographymedicine.anatomical_structureDurapatiteElectron diffractionvisual_artDentinvisual_art.visual_art_mediumNanoparticleshuman tooth crystalsFemaleMirror plane
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Characterization of the Teeth Skeletal Matrix from <i>Arbacia lixula</i>

2016

The teeth of sea urchins are highly complex composite structures, composed predominantly of high magnesium calcite, and of a minor heterogeneous assemblage of organic macromolecules that are occluded within the mineral. The organic matrix fulfils important functions in mineralization, in addition to giving the mineral phase peculiar mechanical properties, different from that of purely inorganic calcite. Nevertheless, the composition and function of individual components of the organic matrix still remains largely unknown. Up to now, the detailed protein repertoire of teeth from a single sea urchin species (Strongylocentrotus purpuratus, order Camarodonta) was investigated. In this study, we…

AlanineCalcitebiologyChemistryMechanical EngineeringArbacioidabiology.organism_classificationStrongylocentrotus purpuratusMineralization (biology)chemistry.chemical_compoundBiochemistryMechanics of Materialsbiology.animalGeneral Materials ScienceSea urchinArbacia lixulaBiomineralizationKey Engineering Materials
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