Search results for "Biophysic"

showing 10 items of 3565 documents

Fibronectin-bound α5β1 integrins sense load and signal to reinforce adhesion in less than a second

2017

Integrin-mediated mechanosensing of the extracellular environment allows cells to control adhesion and signalling. Whether cells sense and respond to force immediately upon ligand-binding is unknown. Here, we report that during adhesion initiation, fibroblasts respond to mechanical load by strengthening integrin-mediated adhesion to fibronectin (FN) in a biphasic manner. In the first phase, which depends on talin and kindlin as well as on the actin nucleators Arp2/3 and mDia, FN-engaged α5β1 integrins activate focal adhesion kinase (FAK) and c-Src in less than 0.5 s to steeply strengthen α5β1- and αV-class integrin-mediated adhesion. When the mechanical load exceeds a certain threshold, fib…

Talin0301 basic medicineTime FactorsMaterials scienceIntegrinNanotechnologyMechanotransduction CellularActin-Related Protein 2-3 ComplexCSK Tyrosine-Protein KinaseFocal adhesionMice03 medical and health sciencesCell AdhesionAnimalsGeneral Materials ScienceMechanotransductionCell adhesionActinMice KnockoutbiologyCell adhesion moleculeMechanical EngineeringGeneral ChemistryAdhesionFibroblastsCondensed Matter PhysicsFibronectinsCell biologyFibronectinsrc-Family Kinases030104 developmental biologyMechanics of MaterialsFocal Adhesion Kinase 1biology.proteinApplications of AFM; integrins; Mechanotransduction; Microscopy; Nanoscale biophysicsIntegrin alpha5beta1Nature Materials
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MRI of tarantulas: morphological and perfusion imaging.

2005

This paper describes a study performed to evaluate the feasibility of using a 1.5-T whole-body magnetic resonance imaging (MRI) equipment, in combination with pharmacokinetic modeling, to obtain in vivo information about the morphology and perfusion of tarantulas (Eurypelma californicum). MRI was performed on three tarantulas using spin-echo sequences for morphological imaging and a rapid spoiled gradient-echo sequence for dynamic imaging during and after contrast medium (CM; Gd-DTPA) injection. Signal enhancement in dynamic measurements was evaluated with a pharmacokinetic two-compartment model. Spin-echo images showed morphological structures well. Dynamic images were of sufficient qualit…

TarantulaGadolinium DTPAScannermedicine.diagnostic_testbiologybusiness.industryDynamic imagingBiomedical EngineeringBiophysicsContrast MediaMagnetic resonance imagingPerfusion scanningbiology.organism_classificationMagnetic Resonance ImagingContrast mediumNuclear magnetic resonanceDynamic contrast-enhanced MRIArachnidamedicineAnimalsRadiology Nuclear Medicine and imagingbusinessPerfusionMagnetic resonance imaging
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Towards modern understanding of the Achilles tendon properties in human movement research

2023

The Achilles tendon (AT) is the strongest tendon in humans, yet it often suffers from injury. The mechanical properties of the AT afford efficient movement, power amplification and power attenuation during locomotor tasks. The properties and the unique structure of the AT as a common tendon for three muscles have been studied frequently in humans using in vivo methods since 1990's. As a part of the celebration of 50 years history of the International Society of Biomechanics, this paper reviews the history of the AT research focusing on its mechanical properties in humans. The questions addressed are: What are the most important mechanical properties of the Achilles tendon, how are they stud…

TechnologySPECKLE-TRACKINGBiomedical EngineeringBiophysicsISOMETRIC PLANTARFLEXIONDIFFERENTIAL STRAIN PATTERNSLOAD-DISPLACEMENT PROPERTIESjänteetELASTIC PROPERTIESstressstiffnessEngineeringYoung 's modulusstrainjäykkyysOrthopedics and Sports MedicineTRICEPS SURAE APONEUROSISin vivo -menetelmäEngineering BiomedicalIN-VIVOrasitusfyysiset ominaisuudetScience & TechnologyQUANTITATIVE ASSESSMENTRehabilitationyoung’s modulusHUMAN GASTROCNEMIUS-MUSCLEMECHANICAL-PROPERTIEShysteresiskantajännebiomekaniikkaLife Sciences & Biomedicine
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Imaging synaptic zinc release in living nervous tissue

2001

Zinc enriched neurons have a pool of synaptic vesicles which contain free or loosely-bound zinc ions. The movement of the vesicular zinc ions into the synaptic clefts has been previously studied by microdialysis, fluorescence postmortem staining for zinc and radioactive zinc isotope. In this study the zinc fluorescence probe N-6-metoxy-p-toluensulfonamide quinoline (TSQ) has been applied as a tracer of synaptic release of zinc ions. This fluorochrome permeates cell membranes and when exposed to living brain slices gives rise to a staining pattern similar to that seen with autometallography. In the living brain slices, fluorescence emission persists after exposure to calcium saturated ethyle…

TelencephalonMicrodialysisCell Membrane PermeabilitySynaptic cleftSodiumNeurophysiologychemistry.chemical_elementZincSynaptic TransmissionSynaptic vesiclePotassium ChlorideTosyl CompoundsImage Processing Computer-AssistedExtracellularAnimalsEdetic AcidFluorescent DyesElectronic Data ProcessingMicroscopy VideoGeneral NeuroscienceCell MembraneLizardsZincMembraneMicroscopy FluorescencechemistryBiochemistryIsotopes of zincAminoquinolinesBiophysicsRabbitsSynaptic VesiclesJournal of Neuroscience Methods
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Standard partial molar volumes of alcohols in aqueous dodecyltrimethylammonium bromide solutions

1990

Density measurements of water-dodecyltrimethylammonium bromide (DTAB)-alcohol ternary systems as a function of alcohol and surfactant concentrations were carried out at 25°C. The alcohols were propanol (PrOH), 2-propanol (2-PrOH) and hexanol (HexOH). The apparent molar volume Vϕ,R of alcohols have been calculated and the standard (infinite dilution) partial molar volumes of alcohols V R at each surfactant concentration were obtained by means of a least squares fit of Vϕ,R vs. the alcohol concentration. The V R vs. surfactant concentration curves have been rationalized in terms of the partial molar volume of alcohol in the aqueous V f and the micellar V b phases and the distribution constant…

Ternary numeral systemChemistryButanolDistribution constantBiophysicsConcentration effectPartial molar propertyAlcoholBiochemistrychemistry.chemical_compoundMolar volumePhysical chemistryOrganic chemistryPhysical and Theoretical ChemistryMolecular BiologyHexanolJournal of Solution Chemistry
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Early stages of test formation in larva of Ascidia malaca (Tunicata, Ascidiacea): ultrastructural and cytochemical investigations.

2003

Abstract The swimming larvae of ascidians are entirely covered by a hyalin coat called tunic, or test. This covering consists of two cuticular layers, C 1 and C 2 , which surround an inner compartment composed of an amorphous hyalin matrix with numerous fibrils dispersed inside. Data from the literature agree on the key role played by the cells of the larval ectodermic layer in the synthesis and secretion of larval test components. In the present article are reported ultrastructural and cytochemical investigations made during test formation in the swimming larva of Ascidia malaca . Besides confirming the role played by ectodermic cells during the early stages of test formation, the investig…

TestGeneral Physics and AstronomyMatrix (biology)FibrilStructural BiologyCompartment (development)AnimalsGeneral Materials ScienceUrochordataAscidiaceaGlycoproteinsAscidian larvaLarvabiologyHistocytochemistryfungiCell BiologyAnatomybiology.organism_classificationAscidiaMicroscopy ElectronUltrastructureLarvaCytochemistryUltrastructureBiophysicsCytochemistryProteoglycansMicron (Oxford, England : 1993)
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There is plenty of room in protein-RNA condensates

2021

Text miningChemistrybusiness.industryBiophysicsRNAComputational biologybusinessBiophysical Journal
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Modulation of intracellular calcium concentrations and T cell activation by prickly pear polyphenols.

2004

Opuntia ficus indica (prickly pear) polyphenolic compounds (OFPC) triggered an increase in [Ca2+]i in human Jurkat T-cell lines. Furthermore, OFPC-induced rise in [Ca2+]i was significantly curtailed in calcium-free buffer (0% Ca2+) as compared to that in 100% Ca2+ medium. Preincubation of cells with tyrphostin A9, an inhibitor of Ca2+ release-activated Ca2+ (CRAC) channels, significantly diminished the OFPC-induced sustained response on the increases in [Ca2+]i. Lanthanum and nifedipine, the respective inhibitors of voltage-dependent and L-type calcium channels, failed to curtail significantly the OFPC-induced calcium response. As OFPC still stimulated increases in [Ca2+]i in 0% Ca2+ medium…

ThapsigarginT-LymphocytesClinical Biochemistrychemistry.chemical_elementGene ExpressionBiologyCalciumLymphocyte ActivationCalcium in biologyMembrane Potentialschemistry.chemical_compoundJurkat CellsPhenolsmedicineHumansCalcium SignalingRNA MessengerMolecular BiologyCalcium signalingCalcium metabolismFlavonoidsVoltage-dependent calcium channelDose-Response Relationship DrugPlant ExtractsReverse Transcriptase Polymerase Chain ReactionEndoplasmic reticulumOpuntiaPolyphenolsCell BiologyGeneral MedicineTyrphostinsMechanism of actionBiochemistrychemistryBiophysicsInterleukin-2ThapsigarginCalciummedicine.symptomMolecular and cellular biochemistry
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OpenCMISS: A multi-physics & multi-scale computational infrastructure for the VPH/Physiome project

2011

The VPH/Physiome Project is developing the model encoding standards CellML (cellml.org) and FieldML (fieldml.org) as well as web-accessible model repositories based on these standards (models.physiome.org). Freely available open source computational modelling software is also being developed to solve the partial differential equations described by the models and to visualise results. The OpenCMISS code (opencmiss.org), described here, has been developed by the authors over the last six years to replace the CMISS code that has supported a number of organ system Physiome projects. OpenCMISS is designed to encompass multiple sets of physical equations and to link subcellular and tissue-level b…

Theoretical computer scienceComputer science0206 medical engineeringBiophysics02 engineering and technologyModels BiologicalBiophysical PhenomenaDomain (software engineering)Computational science03 medical and health sciencesSoftwareEncoding (memory)HumansComputer SimulationMolecular BiologyPhysiological Phenomena030304 developmental biology0303 health sciencesbusiness.industryCellMLData structure020601 biomedical engineeringElasticityFinite element methodElectrophysiological PhenomenaPhysiomeFlow (mathematics)businessSoftwareProgress in Biophysics and Molecular Biology
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Simulation of binary fluids exposed to selectively adsorbing walls: a method to estimate contact angles and line tensions

2011

For an understanding of interfacial phenomena of fluids on the nanoscale a detailed knowledge of the excess free energies of fluids due to walls is required, as well as of the interfacial tension between coexisting fluid phases. A description of simulation approaches to solve this task is given for a suitable model binary (A + B) fluid. Sampling the order parameter distribution of the system without walls, the curvature dependent and flat interfacial tensions of coexisting ‘bulk’ phases is extracted. In a thin film geometry, the difference in wall free energies is found via a new thermodynamic integration method. Thus the contact angle θ of macroscopic droplets is estimated from Young's equ…

Thermal equilibriumMaterials scienceMonte Carlo methodBiophysicsNucleationThermodynamicsThermodynamic integrationMechanicsCondensed Matter PhysicsCurvaturePhysics::Fluid DynamicsSurface tensionContact anglePhysical and Theoretical ChemistryThin filmMolecular BiologyMolecular Physics
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