Search results for "Biophysics"

showing 10 items of 3515 documents

Genetic Systems for Monitoring Interactions of Transmembrane Domains in Bacterial Membranes

2013

In recent years several systems have been developed to study interactions of TM domains within the inner membrane of the Gram-negative bacterium Escherichia coli. Mostly, a transmembrane domain of interest is fused to a soluble DNA-binding domain, which dimerizes in E. coli cytoplasm after interactions of the transmembrane domains. The dimeric DNA-binding domain subsequently binds to a promoter/operator region and thereby activates or represses a reporter gene. In 1996 the first bacterial system has been introduced to measure interactions of TM helices within a bacterial membrane, which is based on fusion of a transmembrane helix of interest to the DNA-binding domain of the Vibrio cholerae …

chemistry.chemical_compoundTransmembrane domainReporter geneOperator (biology)chemistryCytoplasmmedicineBiophysicsInner membranemedicine.disease_causeEscherichia coliDNADomain (software engineering)
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Interaction Between Osmotic and Hydrostatic Pressure in Yeast Inactivation

1999

The protective effect of an osmotic perturbation on high-pressure inactivation has been investigated using a yeast strain:Saccharomyces cerevisiae. Osmotic shocks have been carried out with binary medium (glycerol/sorbitol and water) with or without glucose. Variations of osmotic level, osmotic shift kinetics and time between osmotic and hydrostatic treatment (350 MPa/10 min) have allowed the characterization of cell baroprotection. Two different cumulative baroprotection effects have been distinguished: one conferred by the solute on biological structures and the other related to the osmotic stress, cell volume variations and stress metabolism response (HSP, trehalose). These experiments h…

chemistry.chemical_compoundchemistrybiologyOsmotic shockHydrostatic pressureSaccharomyces cerevisiaeGlycerolBiophysicsSorbitolMetabolismbiology.organism_classificationTrehaloseYeast
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The hedgehog receptor patched is involved in cholesterol transport.

2011

International audience; BACKGROUND: Sonic hedgehog (Shh) signaling plays a crucial role in growth and patterning during embryonic development, and also in stem cell maintenance and tissue regeneration in adults. Aberrant Shh pathway activation is involved in the development of many tumors, and one of the most affected Shh signaling steps found in these tumors is the regulation of the signaling receptor Smoothened by the Shh receptor Patched. In the present work, we investigated Patched activity and the mechanism by which Patched inhibits Smoothened. METHODOLOGY/PRINCIPAL FINDINGS: Using the well-known Shh-responding cell line of mouse fibroblasts NIH 3T3, we first observed that enhancement …

ciliumlcsh:MedicineyeastBiochemistryReceptors G-Protein-CoupledTransmembrane Transport ProteinsMicechemistry.chemical_compound0302 clinical medicineMolecular Cell Biology[SDV.IDA]Life Sciences [q-bio]/Food engineeringMembrane Receptor SignalingBiomacromolecule-Ligand InteractionsSonic hedgehoglcsh:ScienceComputingMilieux_MISCELLANEOUS0303 health sciencesMultidisciplinaryMechanisms of Signal TransductionVeratrum Alkaloids[SDV.IDA] Life Sciences [q-bio]/Food engineeringdrosophilaSmoothened ReceptorLipidsHedgehog signaling pathwayCell biologySterolsSmoothened ReceptorAlimentation et Nutritionembryonic structurescilMembranes and Sorting[SDV.NEU]Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC]Signal transductionvesicular traffickingSignal TransductionResearch Articleprimary ciliumPatched ReceptorsPatchedsignal-transductionanimal structuresCyclopamine[SPI.GPROC] Engineering Sciences [physics]/Chemical and Process EngineeringBiophysicsReceptors Cell Surfacepathway activationSaccharomyces cerevisiaetransduction du signalBiology03 medical and health sciencessonic hedgehoglipidAnimalsHumansFood and NutritionHedgehog Proteins[SPI.GPROC]Engineering Sciences [physics]/Chemical and Process EngineeringBiology030304 developmental biologyPatched Receptorsprotein signalsCell Membranelcsh:RProteinscholesterolBiological TransportTransmembrane Proteinssterol-sensing domainchemistry[ SDV.NEU ] Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC]NIH 3T3 Cellscholesterol;lipid;cell trafficking; yeast;drosophila;cells ; pathway activation; vesicular trafficking; signal-transduction; sonic hedgehog;sterol-sensing domain; primary cilium;protein signalsbiology.proteincellslcsh:Qcell traffickingSmoothened030217 neurology & neurosurgery
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Prevention of Dominant IgG Adsorption on Nanocarriers in IgG‐Enriched Blood Plasma by Clusterin Precoating

2019

Abstract Nanocarriers for medical applications must work reliably within organisms, independent of the individual differences in the blood proteome. Variation in the blood proteome, such as immunoglobulin levels, is a result of environmental, nutrition, and constitution conditions. This variation, however, should not influence the behavior of nanocarriers in biological media. The composition of the protein corona is investigated to understand the influence varying immunoglobulin levels in the blood plasma have on the interactions with nanocarriers. Specifically, the composition of the nanocarriers' coronas is analyzed after incubation in plasma with normal or elevated immunoglobulin G (IgG)…

clusterinGeneral Chemical Engineeringmedia_common.quotation_subjectGeneral Physics and AstronomyMedicine (miscellaneous)Protein Corona02 engineering and technology010402 general chemistry01 natural sciencesBiochemistry Genetics and Molecular Biology (miscellaneous)Immunoglobulin Gimmunoglobulin Gprotein coronaBlood plasmaGeneral Materials ScienceReceptorInternalizationlcsh:Sciencemedia_commonstealth effectbiologyFull PapernanocarriersChemistryGeneral EngineeringFull Papers021001 nanoscience & nanotechnology0104 chemical sciencesIgG bindingBiophysicsbiology.proteinlcsh:QNanocarriersAntibody0210 nano-technologyAdvanced Science
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Studies on the interaction of C1q,a subcomponent of the first component of complement, with porins fromSalmonella minnesotaincorporated into artifici…

1990

AbstractPurified outer membrane proteins (OMP) of Salmonella minnesota, Re-form, were incorporated into liposomes. These induced in macrophages a chemiluminescence signal identical to that of the intact Re-form. This signal was abolished by preincubation of porin-containing liposomes with purified C1q. Incorporation of isolated OMP into black lipid membranes (BLM) resulted in channel-formation which could not be inhibited by isolated C1q. Additionally, incubation of OMP-containing liposomes with BLM resulted in pore-formation within the BLM. This was amplified when lipid A was present within the liposomes. Preincubation of OMP-containing liposomes with purified C1q abolished pore-formation …

congenital hereditary and neonatal diseases and abnormalitiesLuminescenceMacrophageLipid BilayersBiophysicsSynthetic membranePorinschemical and pharmacologic phenomenaBiochemistryIon ChannelsMembrane PotentialsLipid AMiceSalmonellaStructural BiologyGeneticsAnimalsHumansBlack lipid membraneLipid bilayerMolecular BiologyC1qCells CulturedMice Inbred BALB CLiposomeurogenital systemChemistryComplement C1qMacrophagesElectric Conductivitynutritional and metabolic diseasesMembranes ArtificialCell BiologyLiposomeKineticsCholesterolMembraneMembrane proteinBiochemistryOuter membrane proteinPorinPhosphatidylcholinesbacteriaBacterial outer membraneBacterial Outer Membrane ProteinsFEBS Letters
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Cytotoxicity investigations of plasma sprayed calcium phosphate coatings

1994

One potential alternative material to replace hydroxyapatite (HAp) as a coating material for plasma-sprayed coatings on implants for hip replacement is fluorapatite (FAp). FAp has advantages over HAp regarding the capability of being chemically stable during the coating process. This leads to surface coatings containing high apatite rates with a mechanical stability (bond strength, microhardness) comparable to HAp. From the technical point of view the production of FAp coatings is well investigated, although studies on biocompatibility of FAp coatings are fewer. This paper reports the production of HAp and FAp coatings with varying solubilities by plasma spraying and their in vitro cytotoxi…

congenital hereditary and neonatal diseases and abnormalitiesMaterials scienceBiocompatibilityBond strengthMetallurgyFluorapatiteBiomedical EngineeringBiophysicsBioengineeringElectrolyteengineering.materialCell morphologydigestive system diseasesApatiteBiomaterialschemistry.chemical_compoundstomatognathic systemchemistryChemical engineeringCoatingvisual_artvisual_art.visual_art_mediumengineeringFluorideJournal of Materials Science: Materials in Medicine
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Bleomycin, a selective inhibitor of DNA-dependent DNA polymerase from oncogenic RNA viruses.

1972

Abstract Bleomycin, an antibiotic, inhibits the DNA-dependent DNA polymerase from Rauscher murine leukemia virus. Higher concentrations of BLM ∗ are required to inhibit it's RNA-dependent DNA polymerase. These inhibition effects of the non-competitive type are not altered by preincubation of the DNA with BLM. Under comparable conditions neither the DNA-dependent DNA polymerase activity from E. coli and mouse liver nor the DNA-dependent RNA polymerase activity from mouse lymphoma cells are affected by BLM.

congenital hereditary and neonatal diseases and abnormalitiesTime FactorsLymphomaDNA polymeraseHepatitis B virus DNA polymeraseUracil NucleotidesDNA polymerase IIBiophysicsRNA-dependent RNA polymeraseCytosine NucleotidesTritiumBiochemistryRauscher VirusCell LineBleomycinMiceEscherichia coliAnimalsMolecular BiologyPolymeraseDNA clampAntibiotics Antineoplasticbiologyurogenital systemnutritional and metabolic diseasesCell BiologyDNAMolecular biologyReverse transcriptaseKineticsReal-time polymerase chain reactionLiverDNA Nucleotidyltransferasesbiology.proteinRNABiochemical and biophysical research communications
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Host-guest complexes of C-propyl-2-bromoresorcinarene with aromatic N-oxides*

2018

The host-guest complexes of C-propyl-2-bromoresorcinarene with pyridine N-oxide, 3-methylpyridine N-oxide, quinoline N-oxide and isoquinoline N-oxide are studied using single crystal X-ray crystallography and 1H NMR spectroscopy. The C-propyl-2-bromoresorcinarene forms endo-complexes with the aromatic N-oxides in the solid-state when crystallised from either methanol or acetone. In solution, the endo-complexes were observed only in methanol-d4. In DMSO the solvent itself is a good guest, and crystallisation provides only solvate endo-complexes. The C-propyl-2-bromoresorcinarene shows remarkable flexibility when crystallised from either methanol or acetone, and packs into one-dimensional sel…

crystal structurekemiaSupramolecular chemistryCrystal structurechemistry010402 general chemistry01 natural scienceschemistry.chemical_compoundPolymer chemistryPyridinecrystalssupramolekulaarinen kemiaAcetoneresorcinarenesmoleculesIsoquinolineta116Biochemistry Biophysics and Structural Biologyvetysidoksetta114010405 organic chemistryHydrogen bondQuinolinemolekyylitGeneral Chemistrykiteet0104 chemical sciencesaromatic N-oxidesSolventChemistrychemistryvetyhydrogenhydrogen bondsSupramolecular chemistrySUPRAMOLECULAR CHEMISTRY
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Combined dynamics of the 500–600 nm leaf absorption and chlorophyll fluorescence changes in vivo: Evidence for the multifunctional energy quenching r…

2021

Carotenoids (Cars) regulate the energy flow towards the reaction centres in a versatile way whereby the switch between energy harvesting and dissipation is strongly modulated by the operation of the xanthophyll cycles. However, the cascade of molecular mechanisms during the change from light harvesting to energy dissipation remains spectrally poorly understood. By characterizing the in vivo absorbance changes (Delta A) of leaves from four species in the 500-600 nm range through a Gaussian decomposition, while measuring passively simultaneous Chla fluorescence (F) changes, we present a direct observation of the quick antenna adjustments during a 3-min dark-to-high-light induction. Underlying…

delta-pH0106 biological sciencesBiophysicsxanthophyll cyclesXanthophyllslight-harvesting complex01 natural sciencesBiochemistryFluorescenceEnergy quenchingAbsorbanceabsorbency changes03 medical and health scienceschemistry.chemical_compoundSpectroscopyChlorophyll fluorescenceantheraxanthin030304 developmental biologychemistry.chemical_classification4112 Forestrya fluorescence0303 health sciencesChlorophyll AAntheraxanthincarotenoidsdissipationCell BiologyFluorescencephotoprotectionzeaxanthinchemistrysinglet excited chlaChemical physicsExcited stateXanthophylldynamic quenchingleavesspectral fittinglutein epoxide cycle010606 plant biology & botanyBiochimica et Biophysica Acta (BBA) - Bioenergetics
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Non-uniformity of displacement and strain within the Achilles tendon is affected by joint angle configuration and differential muscle loading.

2020

Although the Achilles tendon (AT) has been studied for more than a century, a complete understanding of the mechanical and functional consequences of AT structural organization is currently lacking. The aim of this study was to assess how joint angle configuration affects subtendon displacement and strain of soleus (SOL) and lateral gastrocnemius (LG) muscles. Knots sutured onto SOL and LG subtendons of 12 Wistar rats, were videotaped to quantify displacements and the ankle torque was assessed for different isometric activation conditions (i.e., individual and simultaneous) of the triceps surae muscles. Changing ankle and knee joint angle affected the magnitude of displacement, relative dis…

displacementMaleStrain (injury)lihakset02 engineering and technologyIsometric exerciseKnee JointStrainWeight-Bearing0302 clinical medicineSoleusgastrocnemiusOrthopedics and Sports MedicinerasitusAchilles tendonRehabilitationankle torqueBiomechanical Phenomenamedicine.anatomical_structureAnkle torquekantajännebiomekaniikkaMaterials science0206 medical engineeringBiomedical EngineeringBiophysicsshearAchilles Tendonjänteet03 medical and health sciencesstrainmedicineGastrocnemiusAnimalsDisplacement (orthopedic surgery)Rats WistarMuscle SkeletalBalance (ability)soleusShearDisplacementmedicine.disease020601 biomedical engineeringRatsnilkatAchilles tendonTorqueJoint angleJointsAnkle030217 neurology & neurosurgeryBiomedical engineeringJournal of biomechanics
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