Search results for "Biosynthesis"

showing 10 items of 523 documents

Sequences in the 5′ Nontranslated Region of Hepatitis C Virus Required for RNA Replication

2001

ABSTRACT Sequences in the 5′ and 3′ termini of plus-strand RNA viruses harbor cis -acting elements important for efficient translation and replication. In case of the hepatitis C virus (HCV), a plus-strand RNA virus of the family Flaviviridae , a 341-nucleotide-long nontranslated region (NTR) is located at the 5′ end of the genome. This sequence contains an internal ribosome entry site (IRES) that is located downstream of an about 40-nucleotide-long sequence of unknown function. By using our recently developed HCV replicon system, we mapped and characterized the sequences in the 5′ NTR required for RNA replication. We show that deletions introduced into the 5′ terminal 40 nucleotides abolis…

Hepatitis C virusImmunologyRNA-dependent RNA polymeraseReplicationHepacivirusmedicine.disease_causeOrigin of replicationMicrobiologyVirologymedicineTumor Cells CulturedHumansRepliconGeneticsbiologyRNARNA virusbiology.organism_classificationVirologyNS2-3 proteaseInternal ribosome entry siteInsect ScienceProtein BiosynthesisRNA ViralReplicon5' Untranslated Regions
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Activation of oligodendroglial Fyn kinase enhances translation of mRNAs transported in hnRNP A2-dependent RNA granules.

2008

Central nervous system myelination requires the synthesis of large amounts of myelin basic protein (MBP) at the axon–glia contact site. MBP messenger RNA (mRNA) is transported in RNA granules to oligodendroglial processes in a translationally silenced state. This process is regulated by the trans-acting factor heterogeneous nuclear ribonucleoprotein (hnRNP) A2 binding to the cis-acting A2 response element (A2RE). Release of this repression of MBP mRNA translation is thus essential for myelination. Mice deficient in the Src family tyrosine kinase Fyn are hypomyelinated and contain reduced levels of MBP. Here, we identify hnRNP A2 as a target of activated Fyn in oligodendrocytes. We show that…

Heterogeneous nuclear ribonucleoproteinCell Adhesion Molecules NeuronalRecombinant Fusion ProteinsBiologyHeterogeneous ribonucleoprotein particleCytoplasmic GranulesProto-Oncogene Proteins c-fynResponse Elementsenvironment and public healthRNA TransportCell LineMiceFYNContactinsGenes ReporterReportHeterogeneous-Nuclear Ribonucleoprotein Group A-BProtein biosynthesisAnimalsRNA MessengerPhosphorylationLuciferasesNeural Cell Adhesion MoleculesResearch ArticlesMessenger RNARNATranslation (biology)Cell BiologyMolecular biologyMyelin basic proteinEnzyme ActivationOligodendroglianervous systemProtein Biosynthesisbiology.proteinProtein BindingThe Journal of cell biology
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Heterogeneous nuclear ribonucleoprotein (hnRNP) F is a novel component of oligodendroglial RNA transport granules contributing to regulation of myeli…

2011

Myelin basic protein (MBP) is a major component of central nervous system (CNS) myelin. The absence of MBP results in the loss of almost all compact myelin in the CNS. MBP mRNA is sorted into RNA granules that are transported to the periphery of oligodendrocytes in a translationally inactive state. A central mediator of this transport process is the trans-acting factor heterogeneous nuclear ribonucleoprotein (hnRNP) A2 that binds to the cis-acting A2-response element in the 3′UTR of MBP mRNA. Recently, we found that activation of the Src family nonreceptor tyrosine kinase Fyn in oligodendrocytes leads to phosphorylation of hnRNP A2 and to increased translation of MBP mRNA. Here, we identify…

Heterogeneous nuclear ribonucleoproteinRNA-binding proteinBiologyCytoplasmic GranulesProto-Oncogene Proteins c-fynBiochemistryenvironment and public healthMiceFYNNeurobiologyCompact myelinHeterogeneous-Nuclear Ribonucleoprotein Group A-BProtein biosynthesismedicineMRNA transportAnimalsHumansMolecular Biology3' Untranslated RegionsCells CulturedMyelin SheathHeterogeneous-Nuclear Ribonucleoprotein Group F-Hhemic and immune systemsBiological TransportMyelin Basic ProteinCell BiologyMolecular biologyOligodendrocyteMyelin basic proteinOligodendrogliamedicine.anatomical_structurenervous systemGene Expression Regulationembryonic structuresbiology.proteinbiological phenomena cell phenomena and immunityThe Journal of biological chemistry
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Human histidine-rich glycoprotein expressed in SF9 insect cells inhibits apatite formation

1997

Histidine-rich glycoprotein (HRG) is structurally related to the alpha2-HS glycoprotein/fetuin family of mammalian plasma proteins; both belong to the cystatin superfamily of proteins. We expressed recombinant human HRG and alpha2-HS in Sf9 insect cells for functional analysis. Recombinant HRG bound heparin and fibrinogen while alpha2-HS did not. Both proteins inhibited the formation of apatite, recombinant HRG (IC50 approximately 1 microM) with 2-fold lower molar activity than alpha2-HS (IC50 approximately 0.5 microM). The inhibition in vitro of apatite formation suggests a new function for plasma HRG protein, inhibition of phase separation in blood vessels.

Histidine-rich glycoproteinHistidine-rich glycoproteinalpha-2-HS-GlycoproteinBiophysicsSerum proteinSf9SpodopteraFibrinogenBiochemistryα2-HS-glycoproteinBone and BonesCell Linelaw.inventionStructural BiologylawApatitesCalcium homeostasisGeneticsmedicineAnimalsHumansMolecular Biologychemistry.chemical_classificationHeparinChemistryProteinsBlood ProteinsCell BiologyFetuinBlood proteinsRecombinant ProteinsIn vitroBiochemistryProtein BiosynthesisRecombinant DNAGlycoproteinProtein Bindingmedicine.drugFEBS Letters
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Arylpyridines, arylpyrimidines and related compounds as potential modulator agents of the VEGF, hTERT and c-Myc oncogenes.

2019

Twenty-four derivatives structurally related to honokiol have been synthesized and biologically evaluated. IC50 values were determined towards the HT-29, MCF-7 and HEK-293 cell lines. Some of these derivatives exhibited comparable or lower IC50 values than honokiol towards the HT-29 and MCF-7 cell lines or else higher selectivity indexes than the natural product. Twelve selected derivatives were evaluated for their ability to inhibit the expression of the VEGFA, hTERT and c-Myc genes and also to inhibit the production of total c-Myc protein and the secretion of the VEGF protein. One of the most promising compounds, 3-(2,4-dimethoxyphenyl)pyridine, may be a good candidate for further studies…

Honokiolantiproliferative activityVascular Endothelial Growth Factor APyridinesClinical Biochemistryaza and diazabiphenyl derivativesPharmaceutical ScienceDown-RegulationGene ExpressionAntineoplastic Agents01 natural sciencesBiochemistrygene targetingProto-Oncogene Proteins c-mycchemistry.chemical_compoundanticancer agentsCell Line TumorDrug DiscoveryGene expressionHumansSecretionTelomerase reverse transcriptaseMolecular BiologyTelomeraseCell ProliferationNatural product010405 organic chemistryOrganic ChemistryGene targeting0104 chemical sciences010404 medicinal & biomolecular chemistryVascular endothelial growth factor AHEK293 CellsPyrimidineschemistryCell cultureProtein BiosynthesisCancer researchMolecular MedicineBioorganicmedicinal chemistry
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A heterocyclic oxime from a fungus with anti-juvenile hormone activity

1998

Two fractions obtained after chromatography of dichloromethane extract of Penicillium brevicompactum culture medium showed anti-juvenile hormone activity. One was active when assayed in vivo against Oncopeltus fasciatus third-instar nymphs, whereas the other showed a strong in vitro inhibition of JH III biosynthesis on Locusta migratoria corpora allata. A subfraction of the latter, constituting 97% of this fraction, is a main component that possessed the juvenile hormone biosynthesis inhibitory activity. Chemical characterization of this compound shows a sesquiterpene-like structure, molecular mass of 278.16185 daltons, corresponding to an empirical formula of C15H22N2O3 named brevioxime. E…

Hormone activityMolecular massPhysiologyPenicillium brevicompactumGeneral MedicineBiologybiology.organism_classificationBiochemistryIn vitrochemistry.chemical_compoundBiosynthesischemistryBiochemistryIn vivoInsect ScienceJuvenile hormoneCorpus allatumArchives of Insect Biochemistry and Physiology
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Transcriptional and translational study of the Drosophila subobscura hsp83 gene in normal and heat-shock conditions

1993

In this paper we report a transcriptional and translational study of the hsp83 gene of Drosophila subobscura. This gene is located at the 18C region of the J chromosome. A monoclonal antibody raised against hsp83 was used for the immunological detection of this protein by Western blotting throughout the development of D. subobscura in control and heat-shock conditions. Our results indicate that puff 18C is not only heat-shock inducible but is also expressed during normal development and its level of expression increases at the end of the prepupa period. We detected hsp83 at normal temperatures, in particular developmental stages with the exception of the larval and the beginning of prepupa…

Hot TemperaturePolytene chromosomeTranscription GeneticGene ExpressionGenes InsectGeneral MedicineBiologybiology.organism_classificationMolecular biologyDrosophila subobscuraGene productTranscription (biology)Protein BiosynthesisHeat shock proteinDrosophilidaeGene expressionGeneticsAnimalsDrosophilaMolecular BiologyGeneHeat-Shock ProteinsBiotechnologyGenome
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Translational adaptation to heat stress is mediated by RNA 5‐methylcytosine in Caenorhabditis elegans

2021

Abstract Methylation of carbon‐5 of cytosines (m5C) is a post‐transcriptional nucleotide modification of RNA found in all kingdoms of life. While individual m5C‐methyltransferases have been studied, the impact of the global cytosine‐5 methylome on development, homeostasis and stress remains unknown. Here, using Caenorhabditis elegans, we generated the first organism devoid of m5C in RNA, demonstrating that this modification is non‐essential. Using this genetic tool, we determine the localisation and enzymatic specificity of m5C sites in the RNome in vivo. We find that NSUN‐4 acts as a dual rRNA and tRNA methyltransferase in C. elegans mitochondria. In agreement with leucine and proline bein…

Hot TemperatureProlineRibosomeGeneral Biochemistry Genetics and Molecular BiologyArticle03 medical and health sciencesNSUNCytosine0302 clinical medicineRNA modificationsLeucinem5CAnimalsRNA Processing Post-TranscriptionalCaenorhabditis elegansMolecular BiologytRNACaenorhabditis elegansprotein translation030304 developmental biologyGene Editing0303 health sciencesGeneral Immunology and MicrobiologybiologyGeneral NeuroscienceTRNA MethyltransferaseRNATranslation (biology)MethylationArticlesMethyltransferasesRibosomal RNAbiology.organism_classificationRNA BiologyAdaptation Physiological5‐methylcytosineCell biologyMitochondriatranslation efficiencyProtein BiosynthesisTransfer RNA5-MethylcytosineRNACRISPR-Cas SystemsRibosomes030217 neurology & neurosurgeryHeat-Shock ResponseThe EMBO Journal
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AICA-ribosiduria due to ATIC deficiency: Delineation of the phenotype with three novel cases, and long-term update on the first case.

2020

5-Amino-4-imidazolecarboxamide-ribosiduria (AICA)-ribosiduria is an exceedingly rare autosomal recessive condition resulting from the disruption of the bifunctional purine biosynthesis protein PURH (ATIC), which catalyzes the last two steps of de novo purine synthesis. It is characterized biochemically by the accumulation of AICA-riboside in urine. AICA-ribosiduria had been reported in only one individual, 15 years ago. In this article, we report three novel cases of AICA-ribosiduria from two independent families, with two novel pathogenic variants in ATIC. We also provide a clinical update on the first patient. Based on the phenotypic features shared by these four patients, we define AICA-…

Hydroxymethyl and Formyl TransferasesMalemedicine.medical_specialtyCyclohydrolase activityBioinformaticsCongenital AbnormalitiesEpilepsyMultienzyme ComplexesIntellectual DisabilityGeneticsmedicineHumansBifunctional Purine Biosynthesis Protein PURHChildGenetics (clinical)ATIC DEFICIENCYEpilepsybusiness.industryInfant NewbornInfantmedicine.diseaseAminoimidazole CarboxamidePhenotypePhenotypeNucleotide DeaminasesChild PreschoolMutationMedical geneticsFemaleRibonucleosidesNephrocalcinosisbusinessRare diseaseJournal of inherited metabolic diseaseREFERENCES
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Nouvelles perspectives concernant la structure et la fonction du domaine carboxyl terminal de Hfq

2015

Accumulating evidence indicates that RNA metabolism components assemble into supramolecular cellular structures to mediate functional compartmentalization within the cytoplasmic membrane of the bacterial cell. This cellular compartmentalization could play important roles in the processes of RNA degradation and maturation. These components include Hfq, the RNA chaperone protein, which is involved in the post-transcriptional control of protein synthesis mainly by the virtue of its interactions with several small regulatory ncRNAs (sRNA). The Escherichia coli Hfq is structurally organized into two domains. An N-terminal domain that folds as strongly bent β-sheets within individual protomers to…

IDP intrinsically-disordered proteinslcsh:Lifelcsh:QR1-502sub-membrane macromolecular assemblyPlasma protein bindingsRNA small non-coding RNABiochemistrylcsh:Microbiologyamyloid fibrilsProtein biosynthesis0303 health sciences[SDV.BBM.BS]Life Sciences [q-bio]/Biochemistry Molecular Biology/Structural Biology [q-bio.BM]Escherichia coli Proteins030302 biochemistry & molecular biologyHfqCTRp Hfq C-terminal peptideFTIR Fourier transform infrared spectroscopyNTR N-terminal regionCompartmentalization (psychology)Cell biology[SDV.BBM.BP]Life Sciences [q-bio]/Biochemistry Molecular Biology/BiophysicsRNA Bacterialsmall non-coding ribonucleic acid (RNA)BiochemistryFSD Fourier self-deconvolutionTransfer RNAAmyloid fibrilProtein BindingBiophysicsBiologyHost Factor 1 Protein03 medical and health sciencesEscherichia coliThT thioflavin T[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyProtein Structure QuaternaryncRNA regulatory non-coding RNAPost-transcriptional regulationMolecular Biology030304 developmental biologyOriginal PaperC-terminusRNA[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biologyCell Biologycellular compartmentalizationWT wild-typeProtein Structure Tertiarylcsh:QH501-531Host Factor 1 ProteinCTR Hfq C-terminal regionribonucleic acid (RNA) processing and degradationBiophysicpost-transcriptional regulationBioscience Reports
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