Search results for "Bond length"

showing 10 items of 209 documents

Alternating, all-trans polyenynes: Model compounds for poly(diacetylene)s with defined conjugation length

1994

The syntheses of polyenynes as model compounds for poly(diacetylene)s (PDAs) are described. Variation of properties (UV–VIS, Raman, NMR and bond geometries) as a function of the chain length was investigated. After extrapolation to infinite chain length these data were compared to those for PDAs. From UV–VIS spectra a value of λ = 551 nm (2.25 eV) was calculated corresponding to the electronic transition of a single polyenyne chain. This energy is located at the low energy end of a yellow PDA solution spectrum. From Raman scattering v(CC) = 2108–2128 cm−1 and v(CC) = 1505–1532 cm−1 were calculated after extrapolation. Similarly sp-C13C NMR data yielded a shift of δ = 100 ppm. These data are…

Polymers and PlasticsDiacetyleneChemistryStereochemistryOrganic ChemistryExtrapolationSpectral lineMolecular electronic transitionBond lengthchemistry.chemical_compoundsymbols.namesakeCrystallographyChain (algebraic topology)Materials ChemistrysymbolsRaman spectroscopyRaman scatteringPolymer International
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Conformational investigation of alpha,beta-dehydropeptides. VIII. N-acetyl-alpha,beta-dehydroamino acid N'-methylamides: conformation and electron de…

2009

The Fourier transform infrared spectra are analyzed in the regions of Vs(N-H), amide I, amide II and Vs(C alpha = C beta) bands for a series of Ac-delta Xaa-NHMe, where delta Xaa = delta Ala, (Z)-delta Abu, (Z)-delta Leu, (Z)-delta Phe and delta Val, to determine the predominant solution conformation of these alpha,beta-dehydropeptide-related molecules and the electron distribution perturbation in their amide bonds. The measurements were performed in dichloromethane (DCM). To confirm and rationalize the assignments, the spectra of the respective series of saturated Ac-Xaa-NHMe, recorded in DCM, and the spectra of these two series of unsaturated and saturated compounds, recorded in acetonitr…

Protein ConformationαAb initioElectronsBiochemistrychemistry.chemical_compoundEndocrinologyDehydroalanineComputational chemistryAb initio quantum chemistry methodsamidic resonanceAmideSpectroscopy Fourier Transform InfraredMoleculePeptide bondC5 hydrogen bondC5 conformationFourier transform infrared spectroscopyamide bond lengthβ‐dehydroamino acidsHydrogen bondab initio calculationsdehydroalanineAmidesMolecular WeightCrystallographyFTIR spectroscopychemistryPeptidesΔ‐electron conjugationThe journal of peptide research : official journal of the American Peptide Society
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A G2(MP2) theoretical study of substituent effects on H3BNHnCl3−n (n= 3-0) donor-acceptor complexes

2008

Abstract The complexation energies of H3BNHnCl3−n (n= 3-0) complexes and the proton affinities of NHnCl3−n compounds have been computed at the G2(MP2) level of theory. G2(MP2) results show that the successive chlorine substitution on the ammonia decreases both the basicity of the NHnCl3−n ligands and the stability of H3BNHnCl3−n complexes. The findings are interpreted in terms of the rehybridisation of the nitrogen lone-pair orbital. The NBO partitioning scheme shows that the variation of the N-H and N-Cl bond lengths, upon complexation, is due to variation of “s” character in these bonds.

Protong2(mp2)ab initioAmmonia boraneAb initioSubstituentGeneral ChemistryAffinitiesBond lengthchemistry.chemical_compoundAmmoniaCrystallographyChemistrychemistryComputational chemistryMaterials Chemistryammonia-boraneQD1-999complexsubstituent effectNatural bond orbitalOpen Chemistry
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Computational study of dimethyl- and trimethyl-tin(IV) complexes of porphyrin derivatives

2001

The molecular geometry, energetics and electronic charge distribution of diorgano- and triorgano-tin(IV) complexes of [protoporphyrin-IX] and [meso-tetra(4-carboxyphenyl)porphine] derivatives were determined at semi-empirical and ab initio levels. To study the molecular details of the complexes, simpler molecule models were calculated by the ab initio pseudo-potential method. The molecular properties of these complexes are essentially independent of the presence of the peripheral tin atoms. Agreement was always found among the results of the different computational approaches, as well as between the theoretical and the experimental findings on the molecular geometry of the hypothesized comp…

Pseudo-potential method computational studygeometryporphyrin derivativeOrganotin(IV)-porphyrin complexewaterAb initiochemistry.chemical_elementElementary chargeInorganic Chemistrychemistry.chemical_compoundmetal complexComputational chemistryMoleculeCarboxylateSemi-empirical methodenergy transferarticleGeneral ChemistryPorphyrinBond lengthtin derivativeMolecular geometrychemistrySettore CHIM/03 - Chimica Generale E Inorganicamolecular interactionprotoporphyrinmathematical analysiTinchemical analysi
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Synthesis, spectroscopic studies (Mössbauer and infrared), and the crystal and molecular structure of the organotin(IV)-pyrazine adducts [Sn(CH3)2Cl2…

1987

Two adducts [Sn(CH 3 ) 2 Cl 2 ] 2 pyz ( Ia ) and Sn- (CH 3 ) 2 Br 2 pyz] ( Ib ) (pyz = pyrazine) have been synthesized and characterized in the solid state. Infrared and Mossbauer spectroscopies suggest a five- coordinated species for the Ia complex with an angular CSnC bond and a six-coordinated compound with a linear CSnC bond for the Ib complex. X-ray diffraction studies confirm a distorted trigonal bipyramidal geometry with N, Cl axial atoms and Cl and methyls in the equatorial plane for Ia where the Cl ax SnN bond angle is the lowest one reported to date and the Cl eq Sn bond distance the longest one with regard to similar complexes. This molecule has a short contact of 3.47 A b…

PyrazineChemistryStereochemistryLigandCrystal structureInorganic ChemistryBond lengthCrystallographychemistry.chemical_compoundTrigonal bipyramidal molecular geometryMolecular geometryX-ray crystallographyMaterials ChemistryMoleculePhysical and Theoretical ChemistryInorganica Chimica Acta
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2,3,5,6-Tetrakis(2-pyridyl)pyrazine (tppz)-containing iron(II) complexes: Syntheses and crystal structures

2007

Abstract The preparation and crystal structure of two iron(II) complexes of formula PPh4-mer-[Fe(tppz)(CN)3] · 7H2O (1) and [Fe(tppz)2][Fe(NCS)4] (2) [tppz = 2,3,5,6-tetrakis(2-pyridyl)pyrazine; PPh 4 + = tetraphenylphosphonium cation ] are reported here. The structure of 1 consists of mononuclear mer-tricyano[2,3,5,6-tetrakis(2-pyridyl)pyrazine]ferrate(II) anions, tetraphenylphosphonium cations and crystallization water molecules. Three carbon atoms from three cyanide groups in a mer arrangement and three nitrogen atoms from a tridentate tppz ligand build a somewhat distorted octahedral surrounding around the iron atom in 1. The values of the Fe–C [1.925(6)–1.947(5) A] and Fe–N [1.870(4)–1…

PyrazineThiocyanateLigandInorganic chemistryIonic bondingCrystal structureInorganic ChemistryBond lengthCrystallographychemistry.chemical_compoundchemistryOctahedronMaterials ChemistryMoleculePhysical and Theoretical ChemistryPolyhedron
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Homopolymer adsorption on periodically structured surfaces in systems with incommensurable lengths

2013

Surface-induced selective adsorption of homopolymers on a generic level is numerically analyzed for freely jointed chains (with a fixed bond length) whose monomers are attracted by the sites of regular periodic patterns. In particular, the behavior of the specific heat, the gyration tensor, and the bond order tensor are investigated as functions of the temperature. The properties of the transition are related to the interplay of the characteristic lengths. The adsorption proceeds in two steps for certain incommensurabilities of the bond length and the lattice constant. The corresponding adsorption mechanisms are elucidated by looking at the evolution of the inter bond angle distribution upo…

Quantitative Biology::BiomoleculesChemistryGeneral Physics and AstronomyGyration tensorBond orderCondensed Matter::Soft Condensed MatterBond lengthCrystallographyLattice constantMolecular geometryAdsorptionChemical physicsSelective adsorptionTensorPhysical and Theoretical ChemistryThe Journal of Chemical Physics
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Metal-Polyhydride Molecules Are Compact Inside a Fullerene Cage.

2015

Quantum chemical calculations show that metal−hydride molecules are more compact when they are placed inside a fullerene cage than when they are isolated molecules. The metal−hydrogen bond distance in ZrH4 becomes 0.15 A shorter when it is placed inside a C60 cage. Metal−polyhydride molecules with a large number of H atoms such as ScH15 and ZrH16, which are not bound as isolated molecules, are predicted to be bound inside a fullerene cage. It is also shown that two TiH16 clusters are bound inside a bicapped (9,0) carbon nanotube. Possible ways to make metal−hydrides inside C60 and nanotubes are suggested.

Quantum chemicalFullereneChemistryCarbon nanotubeComputer Science Applicationslaw.inventionMetalBond lengthCondensed Matter::Materials ScienceChemical physicsComputational chemistrylawvisual_artddc:540visual_art.visual_art_mediumPhysics::Atomic and Molecular ClustersMoleculePhysical and Theoretical ChemistryPhysics::Chemical PhysicsCageJournal of chemical theory and computation
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Cu Polyimidazole Thioether Complexes : Comparison of RDF's Reconstructed from XAFS and XRD Data

1997

Radial distribution functions (RDF) reconstructed from XAFS data (Cu K-edge at low and room temperatures) are compared with RDF's constructed from XRD crystallographic data of Cu polyimidazole thioether complexes. New EDA software package possibilities are used to reconstruct RDFs: (i) model independent RDF reconstruction, and (ii) multi shell - cumulant fitting. RDF's obtained from XRD data are broadened with Debye Waller factors calculated from XAFS. This way the structural disorder (set of distances) and thermal (vibrational) disorder are quantitatively taken into account in each RDF reconstruction approach. Within experimental error the three sets of RDF'S agree well with each other for…

RDF SchemaGeneral Physics and AstronomyCrystallographic datacomputer.file_formatX-ray absorption fine structureBond lengthCrystallographysymbols.namesakechemistry.chemical_compoundchemistryThioethersymbolsImidazoleRDFcomputerDebyeLe Journal de Physique IV
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Homo and heterometallic rhomb-like Ni4 and Mn2Ni2 complexes

2014

Abstract Two new polynuclear complexes with hydroxyl-rich Schiff base ligand 3-[(2-Hydroxy-benzylidene)-amino]-propane-1,2-diol (H3L), namely [NiII2(HL)(H2L)(SCN)]2·DMF (1) and [MnIII2NiII2(HL)2(L)2] (2) have been synthesized and characterized by single crystal X-ray diffraction, elemental analyses, FTIR, UV–Vis spectroscopy and variable temperature magnetic susceptibility measurements. The X-ray refinements reveal that both compounds present defective rhomb-like dicubane central cores (Ni4 in 1 and Mn2Ni2 in 2). Magnetic susceptibility measurements indicate the presence of overall antiferromagnetic exchange interactions in 1 along the side connected by a N and O atoms (J1 = −43.6 cm−1) and…

Schiff baseLigandChemistryMagnetic susceptibilityInorganic ChemistryBond lengthchemistry.chemical_compoundCrystallographyMolecular geometryFerromagnetismMaterials ChemistryAntiferromagnetismPhysical and Theoretical ChemistrySingle crystalPolyhedron
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